Tbg972.10.7780 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.7780OTHER0.9994620.0003950.000143
No Results

  • Fasta :-

    >Tbg972.10.7780 MSRTDFSCAICYEVASEPVVTRCGHLFCWRCLSRWLHPPRSAVNTECPVCRGRVDENVNG DIIPLYGKGRSEGASSSFQRSSRWTQGASHGPPPRPAAARVPSSSDGNSFRLRGAFPFLS STSFFFFSSDPYSLIAISLLWAMYQLPWREWLTNLSTYLGGVSNTVPTADEGGSNVGAVP SPQRSDDLHSREVGEAITRHVRSAMVLALGLLATSFFMV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/792 Sequence name : 792 Sequence length : 219 VALUES OF COMPUTED PARAMETERS Coef20 : 4.229 CoefTot : 0.247 ChDiff : 3 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.282 2.100 0.335 0.718 MesoH : 0.253 0.284 -0.227 0.296 MuHd_075 : 28.962 19.976 6.734 6.390 MuHd_095 : 14.470 7.133 6.607 0.667 MuHd_100 : 20.476 7.836 7.323 1.607 MuHd_105 : 20.916 8.774 7.044 2.695 Hmax_075 : 6.067 13.650 1.521 4.737 Hmax_095 : 10.100 7.788 3.427 2.432 Hmax_100 : 10.600 7.900 3.947 2.190 Hmax_105 : 11.600 8.575 3.816 2.476 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9667 0.0333 DFMC : 0.9133 0.0867
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 219 Tbg972.10.7780 MSRTDFSCAICYEVASEPVVTRCGHLFCWRCLSRWLHPPRSAVNTECPVCRGRVDENVNGDIIPLYGKGRSEGASSSFQR 80 SSRWTQGASHGPPPRPAAARVPSSSDGNSFRLRGAFPFLSSTSFFFFSSDPYSLIAISLLWAMYQLPWREWLTNLSTYLG 160 GVSNTVPTADEGGSNVGAVPSPQRSDDLHSREVGEAITRHVRSAMVLALGLLATSFFMV 240 ................................................................................ 80 ................................................................................ 160 ........................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.7780 3 ----MSR|TD 0.074 . Tbg972.10.7780 22 SEPVVTR|CG 0.075 . Tbg972.10.7780 30 GHLFCWR|CL 0.095 . Tbg972.10.7780 34 CWRCLSR|WL 0.099 . Tbg972.10.7780 40 RWLHPPR|SA 0.157 . Tbg972.10.7780 51 TECPVCR|GR 0.102 . Tbg972.10.7780 53 CPVCRGR|VD 0.092 . Tbg972.10.7780 68 IIPLYGK|GR 0.062 . Tbg972.10.7780 70 PLYGKGR|SE 0.152 . Tbg972.10.7780 80 ASSSFQR|SS 0.229 . Tbg972.10.7780 83 SFQRSSR|WT 0.331 . Tbg972.10.7780 95 SHGPPPR|PA 0.121 . Tbg972.10.7780 100 PRPAAAR|VP 0.104 . Tbg972.10.7780 111 SDGNSFR|LR 0.110 . Tbg972.10.7780 113 GNSFRLR|GA 0.191 . Tbg972.10.7780 149 MYQLPWR|EW 0.093 . Tbg972.10.7780 184 AVPSPQR|SD 0.089 . Tbg972.10.7780 191 SDDLHSR|EV 0.170 . Tbg972.10.7780 199 VGEAITR|HV 0.094 . Tbg972.10.7780 202 AITRHVR|SA 0.375 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.7780 ATGTCTCGTACTGACTTTTCATGTGCCATATGCTATGAGGTGGCTAGCGAGCCTGTTGTA ACTCGCTGTGGGCATCTCTTTTGTTGGAGGTGCCTTAGCAGGTGGCTTCATCCCCCAAGA TCAGCAGTGAACACGGAGTGTCCGGTCTGTCGCGGAAGAGTTGATGAGAATGTTAATGGC GATATTATTCCGTTGTATGGTAAGGGGAGAAGTGAGGGCGCATCGTCTTCGTTTCAACGT TCTTCGCGGTGGACACAAGGCGCTTCGCACGGGCCGCCGCCACGCCCGGCAGCTGCGAGA GTACCATCCAGTTCAGATGGGAATTCATTTCGACTCCGAGGGGCATTTCCTTTTCTGAGC AGTACCTCTTTTTTCTTTTTTTCTTCCGACCCTTATTCACTGATTGCGATATCTCTTTTG TGGGCTATGTACCAGCTTCCATGGAGGGAGTGGTTGACGAACCTGAGTACGTATTTGGGA GGTGTGAGCAACACTGTGCCTACTGCAGATGAGGGCGGGAGTAATGTGGGCGCCGTGCCC TCACCACAGCGGTCGGACGATTTACACTCCCGAGAGGTGGGTGAGGCAATTACGAGGCAC GTGCGAAGCGCAATGGTGTTAGCATTAGGTTTGTTAGCCACATCTTTTTTTATGGTGTGA
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  • Fasta :-

    MSRTDFSCAICYEVASEPVVTRCGHLFCWRCLSRWLHPPRSAVNTECPVCRGRVDENVNG DIIPLYGKGRSEGASSSFQRSSRWTQGASHGPPPRPAAARVPSSSDGNSFRLRGAFPFLS STSFFFFSSDPYSLIAISLLWAMYQLPWREWLTNLSTYLGGVSNTVPTADEGGSNVGAVP SPQRSDDLHSREVGEAITRHVRSAMVLALGLLATSFFMV

  • title: Zn binding site
  • coordinates: C8,C11,C23,H25,C28,C31,C47,C50
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.7780103 SARVPSSSDG0.993unspTbg972.10.7780190 SDDLHSREVG0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India