Tbg972.11.120 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.120OTHER0.9998980.0000960.000006
No Results

  • Fasta :-

    >Tbg972.11.120 MTKTWLPLESNPDVLNEYLKSLGLTNPKVAFNDVFGLDAELLAMVPRPIYAMILLYPLSD GMESGDAAACLKQKSEIEQFMTTNKFFYSKQTISNACGTMAVLHAVLNNTDVVGDMLEGS PIATLLWSTKDKSPEENAKLIESDSLLDEAHALASASGVTDNQPLDADIDLHFTCFVKIG DRCVELDGRKPHPLLHGHCVDEESFVKSCVDAIKEKMGRDPQSPRFNIIALCESCE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/31 Sequence name : 31 Sequence length : 236 VALUES OF COMPUTED PARAMETERS Coef20 : 3.366 CoefTot : -0.122 ChDiff : -16 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.953 1.476 0.064 0.541 MesoH : -0.384 0.342 -0.357 0.237 MuHd_075 : 28.265 15.438 6.546 4.378 MuHd_095 : 15.084 6.570 4.155 1.361 MuHd_100 : 26.433 11.243 6.073 4.073 MuHd_105 : 31.568 14.269 7.020 5.658 Hmax_075 : 16.450 14.000 1.294 5.332 Hmax_095 : 7.100 2.800 -2.015 2.940 Hmax_100 : 7.100 4.700 -0.941 2.940 Hmax_105 : 6.213 5.775 -0.704 3.054 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9745 0.0255 DFMC : 0.9397 0.0603
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 236 Tbg972.11.120 MTKTWLPLESNPDVLNEYLKSLGLTNPKVAFNDVFGLDAELLAMVPRPIYAMILLYPLSDGMESGDAAACLKQKSEIEQF 80 MTTNKFFYSKQTISNACGTMAVLHAVLNNTDVVGDMLEGSPIATLLWSTKDKSPEENAKLIESDSLLDEAHALASASGVT 160 DNQPLDADIDLHFTCFVKIGDRCVELDGRKPHPLLHGHCVDEESFVKSCVDAIKEKMGRDPQSPRFNIIALCESCE 240 ................................................................................ 80 ................................................................................ 160 ............................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.120 3 ----MTK|TW 0.064 . Tbg972.11.120 20 VLNEYLK|SL 0.084 . Tbg972.11.120 28 LGLTNPK|VA 0.061 . Tbg972.11.120 47 LLAMVPR|PI 0.119 . Tbg972.11.120 72 DAAACLK|QK 0.074 . Tbg972.11.120 74 AACLKQK|SE 0.097 . Tbg972.11.120 85 QFMTTNK|FF 0.070 . Tbg972.11.120 90 NKFFYSK|QT 0.069 . Tbg972.11.120 130 TLLWSTK|DK 0.098 . Tbg972.11.120 132 LWSTKDK|SP 0.105 . Tbg972.11.120 139 SPEENAK|LI 0.067 . Tbg972.11.120 178 HFTCFVK|IG 0.058 . Tbg972.11.120 182 FVKIGDR|CV 0.085 . Tbg972.11.120 189 CVELDGR|KP 0.077 . Tbg972.11.120 190 VELDGRK|PH 0.057 . Tbg972.11.120 207 DEESFVK|SC 0.072 . Tbg972.11.120 214 SCVDAIK|EK 0.065 . Tbg972.11.120 216 VDAIKEK|MG 0.064 . Tbg972.11.120 219 IKEKMGR|DP 0.092 . Tbg972.11.120 225 RDPQSPR|FN 0.117 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.120 ATGACCAAAACGTGGCTACCACTCGAAAGCAATCCCGATGTGTTGAACGAATATCTGAAG AGTTTAGGGTTGACTAACCCAAAGGTGGCATTCAACGATGTGTTTGGCCTGGATGCCGAA TTACTCGCCATGGTCCCCCGACCGATTTACGCGATGATTCTTTTGTATCCATTGTCAGAT GGGATGGAGTCTGGAGATGCTGCCGCTTGTCTCAAGCAAAAATCTGAAATAGAGCAGTTT ATGACGACAAACAAGTTCTTCTACAGCAAACAGACAATTTCCAATGCTTGCGGCACCATG GCTGTGCTCCACGCCGTTCTCAATAACACGGATGTTGTGGGCGACATGTTGGAGGGAAGC CCAATTGCTACACTTCTGTGGAGTACGAAGGATAAATCCCCCGAGGAAAATGCAAAACTA ATCGAATCAGATTCCCTGCTTGACGAGGCACATGCATTGGCGTCAGCATCAGGTGTTACC GATAATCAGCCTCTCGACGCAGATATCGACCTTCATTTTACCTGTTTTGTAAAGATAGGT GATCGCTGTGTGGAACTTGACGGAAGAAAGCCTCATCCACTTCTTCATGGCCATTGCGTG GACGAGGAGAGTTTTGTAAAGTCATGCGTGGATGCGATTAAGGAGAAAATGGGTCGGGAC CCACAATCTCCTCGGTTCAATATTATTGCACTGTGTGAGTCTTGCGAGTGA
  • Download Fasta

  • Fasta :-

    MTKTWLPLESNPDVLNEYLKSLGLTNPKVAFNDVFGLDAELLAMVPRPIYAMILLYPLSD GMESGDAAACLKQKSEIEQFMTTNKFFYSKQTISNACGTMAVLHAVLNNTDVVGDMLEGS PIATLLWSTKDKSPEENAKLIESDSLLDEAHALASASGVTDNQPLDADIDLHFTCFVKIG DRCVELDGRKPHPLLHGHCVDEESFVKSCVDAIKEKMGRDPQSPRFNIIALCESCE

  • title: catalytic site
  • coordinates: Q91,C97,H172,D187
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.120133 STKDKSPEEN0.998unspTbg972.11.120223 SRDPQSPRFN0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India