Tbg972.11.14070 | cyclin 1

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.14070OTHER0.9943980.0037180.001885
No Results

  • Fasta :-

    >Tbg972.11.14070 MMTNLNVRTIKGCFPGSLPDALNDMSVIDHILSLTGRFDEGQAALASTVNVVYVGTAVYD IPRYREEYTKNFIARGCGISEVCVAEARSTGATPCAAATMVTPDQLQHLAEAHIILLPEG NTLFAIRRWEETGLDACLRASAARGVVLVGGGCCFRAEHSDSANPKTCAQYMLSRENEVD SGQPVEMEEGGAKWEYLCVHGLSVLPGIFCPQHSSRDATGLLLNESFSKMLKRHPTERGI GVDCRAVLLLMGDGRYQVLTIANREGRTASVKDINIQIKDVVEGNVQTTTIQQQGSVEEL LRKPCGPVVRDPFEAYYAMANPTALTEKLLCAPR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/887 Sequence name : 887 Sequence length : 334 VALUES OF COMPUTED PARAMETERS Coef20 : 3.718 CoefTot : -0.896 ChDiff : -7 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 1.371 0.190 0.559 MesoH : -0.483 0.435 -0.241 0.201 MuHd_075 : 7.509 5.993 2.684 2.959 MuHd_095 : 27.295 18.990 7.729 5.363 MuHd_100 : 24.967 14.537 7.419 4.130 MuHd_105 : 20.869 9.032 6.529 3.013 Hmax_075 : 16.333 12.483 1.893 5.145 Hmax_095 : 12.000 10.675 2.683 3.876 Hmax_100 : 11.200 10.300 2.351 3.790 Hmax_105 : 15.400 14.583 4.343 4.387 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8805 0.1195 DFMC : 0.9135 0.0865
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 334 Tbg972.11.14070 MMTNLNVRTIKGCFPGSLPDALNDMSVIDHILSLTGRFDEGQAALASTVNVVYVGTAVYDIPRYREEYTKNFIARGCGIS 80 EVCVAEARSTGATPCAAATMVTPDQLQHLAEAHIILLPEGNTLFAIRRWEETGLDACLRASAARGVVLVGGGCCFRAEHS 160 DSANPKTCAQYMLSRENEVDSGQPVEMEEGGAKWEYLCVHGLSVLPGIFCPQHSSRDATGLLLNESFSKMLKRHPTERGI 240 GVDCRAVLLLMGDGRYQVLTIANREGRTASVKDINIQIKDVVEGNVQTTTIQQQGSVEELLRKPCGPVVRDPFEAYYAMA 320 NPTALTEKLLCAPR 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.14070 8 MTNLNVR|TI 0.104 . Tbg972.11.14070 11 LNVRTIK|GC 0.133 . Tbg972.11.14070 37 ILSLTGR|FD 0.134 . Tbg972.11.14070 63 AVYDIPR|YR 0.090 . Tbg972.11.14070 65 YDIPRYR|EE 0.083 . Tbg972.11.14070 70 YREEYTK|NF 0.067 . Tbg972.11.14070 75 TKNFIAR|GC 0.293 . Tbg972.11.14070 88 VCVAEAR|ST 0.162 . Tbg972.11.14070 127 NTLFAIR|RW 0.086 . Tbg972.11.14070 128 TLFAIRR|WE 0.184 . Tbg972.11.14070 139 GLDACLR|AS 0.085 . Tbg972.11.14070 144 LRASAAR|GV 0.194 . Tbg972.11.14070 156 GGGCCFR|AE 0.073 . Tbg972.11.14070 166 SDSANPK|TC 0.082 . Tbg972.11.14070 175 AQYMLSR|EN 0.084 . Tbg972.11.14070 193 MEEGGAK|WE 0.062 . Tbg972.11.14070 216 CPQHSSR|DA 0.223 . Tbg972.11.14070 229 LNESFSK|ML 0.064 . Tbg972.11.14070 232 SFSKMLK|RH 0.061 . Tbg972.11.14070 233 FSKMLKR|HP 0.182 . Tbg972.11.14070 238 KRHPTER|GI 0.169 . Tbg972.11.14070 245 GIGVDCR|AV 0.109 . Tbg972.11.14070 255 LLMGDGR|YQ 0.075 . Tbg972.11.14070 264 VLTIANR|EG 0.066 . Tbg972.11.14070 267 IANREGR|TA 0.385 . Tbg972.11.14070 272 GRTASVK|DI 0.096 . Tbg972.11.14070 279 DINIQIK|DV 0.115 . Tbg972.11.14070 302 SVEELLR|KP 0.065 . Tbg972.11.14070 303 VEELLRK|PC 0.090 . Tbg972.11.14070 310 PCGPVVR|DP 0.108 . Tbg972.11.14070 328 PTALTEK|LL 0.062 . Tbg972.11.14070 334 KLLCAPR|-- 0.081 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.14070 ATGATGACAAACTTGAATGTGCGGACCATTAAGGGCTGCTTCCCCGGTTCCTTACCTGAT GCACTCAACGACATGTCCGTCATCGATCACATTCTTTCCCTGACTGGACGCTTCGACGAG GGTCAGGCTGCGCTGGCGTCAACTGTCAACGTGGTTTATGTTGGTACCGCGGTCTACGAT ATTCCACGCTATCGTGAAGAGTACACGAAGAATTTCATAGCGCGCGGTTGCGGAATAAGT GAGGTTTGCGTTGCAGAAGCGCGGTCGACCGGAGCGACACCGTGTGCGGCTGCTACCATG GTTACGCCAGACCAGCTTCAGCACTTAGCGGAGGCACATATCATTTTACTACCGGAGGGT AACACCCTTTTCGCTATACGACGCTGGGAGGAAACGGGCCTCGATGCGTGTCTCCGGGCA AGTGCAGCTCGTGGTGTTGTCTTAGTGGGGGGTGGTTGCTGCTTCAGGGCTGAACACAGC GACTCGGCAAACCCCAAAACATGCGCACAGTACATGTTGTCGCGGGAAAATGAAGTGGAT TCAGGGCAGCCGGTGGAAATGGAGGAAGGGGGTGCGAAGTGGGAGTACCTATGCGTTCAC GGCCTCAGTGTGTTGCCGGGTATATTCTGCCCCCAGCACAGCTCGCGTGACGCCACGGGT TTACTCTTGAATGAAAGCTTTAGTAAGATGCTGAAACGGCATCCAACTGAGCGAGGGATT GGTGTCGACTGCAGGGCGGTGCTTCTGCTGATGGGTGACGGTCGGTACCAGGTGCTGACG ATAGCCAATAGAGAGGGAAGAACTGCCTCCGTTAAGGACATAAACATCCAAATAAAGGAT GTTGTCGAGGGAAATGTGCAGACAACCACAATTCAACAACAGGGAAGCGTAGAAGAACTG CTTCGAAAACCGTGTGGACCTGTCGTACGAGACCCCTTTGAGGCGTACTATGCAATGGCC AACCCAACTGCGCTAACAGAAAAGCTACTATGTGCACCCAGGTGA
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  • Fasta :-

    MMTNLNVRTIKGCFPGSLPDALNDMSVIDHILSLTGRFDEGQAALASTVNVVYVGTAVYD IPRYREEYTKNFIARGCGISEVCVAEARSTGATPCAAATMVTPDQLQHLAEAHIILLPEG NTLFAIRRWEETGLDACLRASAARGVVLVGGGCCFRAEHSDSANPKTCAQYMLSRENEVD SGQPVEMEEGGAKWEYLCVHGLSVLPGIFCPQHSSRDATGLLLNESFSKMLKRHPTERGI GVDCRAVLLLMGDGRYQVLTIANREGRTASVKDINIQIKDVVEGNVQTTTIQQQGSVEEL LRKPCGPVVRDPFEAYYAMANPTALTEKLLCAPR

  • title: active site pocket
  • coordinates: G120,G152,G182,Q212,L223,C244
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.14070296 SQQQGSVEEL0.996unspTbg972.11.14070296 SQQQGSVEEL0.996unspTbg972.11.14070296 SQQQGSVEEL0.996unspTbg972.11.14070214 SCPQHSSRDA0.996unspTbg972.11.14070270 SGRTASVKDI0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India