Tbg972.11.16260 | WLM domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0097014      GO:0005737      GO:0031981      

  • Curated_GO_Components:  ciliary plasm      cytoplasm      nuclear lumen      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.16260OTHER0.9995590.0001040.000337
No Results

  • Fasta :-

    >Tbg972.11.16260 MPVTTHFSSIGAKQSEVIETATTLGWTNDHQAQDYLQKLLIIGRPILRAHNWKIHRLKEF YPRSARLLGQNFNRGEEVCVRFRVPKEKNTFFPFHEVVCTFLHELAHCKYSKHDRHFWEL YTELSVECCRLDLNASLEREAAAPPDRRHTGSGRRLGGSRIVPLPREPEAMRRILSEAAE RRRQSSENGQCYGCAHDKTGVGSELNDGLWTCDNCDGVIDALRGKCEFCVEVGDSTEQVE EWSCKRCSFHNHCALVQCEACGRLKSGRTADGTNTVHTVKALAASSDHLLFTMTLGRVAD ALAPILQEMRWSVACLEEFAPPLKRVMSRSSFKNSNECDTLSIRLRSPNNPHEPLTFTCV LAHALHQLAHLTEKNHGANFVHAWIAMIHRFLTETKAFSDDFISSQEQEDLLCLAMELEL LLNGLSGRDTALCDDSLDNVPHLQRLFENCATFVKRERLFTVATTREAGVVGHSKHLELW QCRRCSVNNNGGFIIFCEVCGAPRQLSVLLRTSRTVAVCAASNETVIDISDDDGDDGSAT SAGEATISPGVVFIID
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/74 Sequence name : 74 Sequence length : 556 VALUES OF COMPUTED PARAMETERS Coef20 : 3.751 CoefTot : -0.533 ChDiff : -10 ZoneTo : 15 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.188 1.441 0.153 0.549 MesoH : -0.616 0.372 -0.247 0.207 MuHd_075 : 0.943 8.918 1.438 2.777 MuHd_095 : 15.822 12.377 5.614 4.326 MuHd_100 : 21.404 15.592 6.815 4.691 MuHd_105 : 23.337 14.541 6.732 4.163 Hmax_075 : 7.350 12.800 -0.008 3.880 Hmax_095 : 12.800 11.300 1.958 4.550 Hmax_100 : 13.600 16.300 2.157 5.830 Hmax_105 : 10.900 13.417 1.353 4.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9768 0.0232 DFMC : 0.9708 0.0292
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 556 Tbg972.11.16260 MPVTTHFSSIGAKQSEVIETATTLGWTNDHQAQDYLQKLLIIGRPILRAHNWKIHRLKEFYPRSARLLGQNFNRGEEVCV 80 RFRVPKEKNTFFPFHEVVCTFLHELAHCKYSKHDRHFWELYTELSVECCRLDLNASLEREAAAPPDRRHTGSGRRLGGSR 160 IVPLPREPEAMRRILSEAAERRRQSSENGQCYGCAHDKTGVGSELNDGLWTCDNCDGVIDALRGKCEFCVEVGDSTEQVE 240 EWSCKRCSFHNHCALVQCEACGRLKSGRTADGTNTVHTVKALAASSDHLLFTMTLGRVADALAPILQEMRWSVACLEEFA 320 PPLKRVMSRSSFKNSNECDTLSIRLRSPNNPHEPLTFTCVLAHALHQLAHLTEKNHGANFVHAWIAMIHRFLTETKAFSD 400 DFISSQEQEDLLCLAMELELLLNGLSGRDTALCDDSLDNVPHLQRLFENCATFVKRERLFTVATTREAGVVGHSKHLELW 480 QCRRCSVNNNGGFIIFCEVCGAPRQLSVLLRTSRTVAVCAASNETVIDISDDDGDDGSATSAGEATISPGVVFIID 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.16260 13 FSSIGAK|QS 0.099 . Tbg972.11.16260 38 AQDYLQK|LL 0.069 . Tbg972.11.16260 44 KLLIIGR|PI 0.081 . Tbg972.11.16260 48 IGRPILR|AH 0.084 . Tbg972.11.16260 53 LRAHNWK|IH 0.075 . Tbg972.11.16260 56 HNWKIHR|LK 0.090 . Tbg972.11.16260 58 WKIHRLK|EF 0.064 . Tbg972.11.16260 63 LKEFYPR|SA 0.151 . Tbg972.11.16260 66 FYPRSAR|LL 0.349 . Tbg972.11.16260 74 LGQNFNR|GE 0.103 . Tbg972.11.16260 81 GEEVCVR|FR 0.093 . Tbg972.11.16260 83 EVCVRFR|VP 0.069 . Tbg972.11.16260 86 VRFRVPK|EK 0.169 . Tbg972.11.16260 88 FRVPKEK|NT 0.078 . Tbg972.11.16260 109 HELAHCK|YS 0.066 . Tbg972.11.16260 112 AHCKYSK|HD 0.062 . Tbg972.11.16260 115 KYSKHDR|HF 0.124 . Tbg972.11.16260 130 LSVECCR|LD 0.066 . Tbg972.11.16260 139 LNASLER|EA 0.085 . Tbg972.11.16260 147 AAAPPDR|RH 0.085 . Tbg972.11.16260 148 AAPPDRR|HT 0.188 . Tbg972.11.16260 154 RHTGSGR|RL 0.107 . Tbg972.11.16260 155 HTGSGRR|LG 0.093 . Tbg972.11.16260 160 RRLGGSR|IV 0.085 . Tbg972.11.16260 166 RIVPLPR|EP 0.095 . Tbg972.11.16260 172 REPEAMR|RI 0.073 . Tbg972.11.16260 173 EPEAMRR|IL 0.145 . Tbg972.11.16260 181 LSEAAER|RR 0.076 . Tbg972.11.16260 182 SEAAERR|RQ 0.151 . Tbg972.11.16260 183 EAAERRR|QS 0.166 . Tbg972.11.16260 198 YGCAHDK|TG 0.060 . Tbg972.11.16260 223 GVIDALR|GK 0.074 . Tbg972.11.16260 225 IDALRGK|CE 0.067 . Tbg972.11.16260 245 VEEWSCK|RC 0.066 . Tbg972.11.16260 246 EEWSCKR|CS 0.144 . Tbg972.11.16260 263 QCEACGR|LK 0.076 . Tbg972.11.16260 265 EACGRLK|SG 0.076 . Tbg972.11.16260 268 GRLKSGR|TA 0.153 . Tbg972.11.16260 280 NTVHTVK|AL 0.067 . Tbg972.11.16260 297 FTMTLGR|VA 0.092 . Tbg972.11.16260 310 PILQEMR|WS 0.080 . Tbg972.11.16260 324 EFAPPLK|RV 0.059 . Tbg972.11.16260 325 FAPPLKR|VM 0.114 . Tbg972.11.16260 329 LKRVMSR|SS 0.184 . Tbg972.11.16260 333 MSRSSFK|NS 0.069 . Tbg972.11.16260 344 CDTLSIR|LR 0.076 . Tbg972.11.16260 346 TLSIRLR|SP 0.121 . Tbg972.11.16260 374 LAHLTEK|NH 0.074 . Tbg972.11.16260 390 WIAMIHR|FL 0.098 . Tbg972.11.16260 396 RFLTETK|AF 0.070 . Tbg972.11.16260 428 LNGLSGR|DT 0.107 . Tbg972.11.16260 445 NVPHLQR|LF 0.074 . Tbg972.11.16260 455 NCATFVK|RE 0.055 . Tbg972.11.16260 456 CATFVKR|ER 0.128 . Tbg972.11.16260 458 TFVKRER|LF 0.083 . Tbg972.11.16260 466 FTVATTR|EA 0.138 . Tbg972.11.16260 475 GVVGHSK|HL 0.067 . Tbg972.11.16260 483 LELWQCR|RC 0.085 . Tbg972.11.16260 484 ELWQCRR|CS 0.111 . Tbg972.11.16260 504 EVCGAPR|QL 0.097 . Tbg972.11.16260 511 QLSVLLR|TS 0.108 . Tbg972.11.16260 514 VLLRTSR|TV 0.195 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.16260 ATGCCGGTTACGACACACTTTTCTAGCATTGGCGCTAAGCAGTCTGAAGTCATCGAGACT GCCACAACATTGGGATGGACAAATGATCATCAAGCGCAGGATTATCTCCAGAAACTGTTG ATCATCGGTCGGCCTATCCTTAGAGCACACAACTGGAAGATACACCGCTTGAAAGAATTT TACCCGCGTAGCGCGCGGCTGCTGGGGCAAAATTTTAATAGAGGGGAAGAAGTGTGTGTT AGATTTCGTGTACCCAAGGAGAAGAACACATTTTTCCCATTTCATGAGGTGGTTTGTACT TTTTTGCATGAGCTTGCCCACTGCAAGTACTCCAAGCACGACCGGCACTTTTGGGAACTG TACACAGAGCTTTCAGTGGAGTGTTGCAGATTAGATCTAAATGCTTCGCTAGAGAGGGAA GCTGCTGCCCCACCAGATCGTCGTCATACAGGCAGTGGTAGGCGTCTTGGCGGGAGCAGA ATAGTTCCACTTCCTCGCGAGCCAGAGGCGATGCGGCGCATTCTTTCTGAGGCTGCGGAG AGGCGCCGGCAATCGAGTGAAAATGGTCAGTGTTATGGATGTGCACACGACAAAACGGGA GTAGGGAGTGAGTTGAATGACGGTTTGTGGACTTGTGATAACTGCGATGGCGTCATTGAT GCTCTGCGTGGAAAGTGTGAGTTCTGTGTGGAGGTGGGCGACTCAACCGAACAAGTTGAG GAGTGGAGTTGTAAACGGTGTTCTTTTCATAATCACTGTGCTCTTGTGCAGTGTGAGGCG TGCGGTCGCTTAAAGTCAGGACGTACAGCTGACGGAACGAACACTGTTCATACCGTGAAA GCGTTGGCAGCGTCGTCCGACCACTTGCTCTTCACCATGACTTTGGGCCGAGTAGCTGAT GCGTTAGCTCCTATCCTACAGGAAATGCGGTGGAGTGTGGCATGTCTTGAGGAATTCGCG CCTCCATTGAAGCGTGTGATGTCAAGATCTAGTTTCAAGAATAGCAACGAGTGCGACACA CTGAGCATTCGCCTCCGCTCACCGAATAATCCCCACGAGCCACTGACATTTACCTGTGTG CTGGCGCATGCACTGCATCAGTTGGCGCATCTGACAGAGAAGAACCATGGCGCAAACTTT GTTCACGCGTGGATAGCTATGATTCACCGTTTTCTCACTGAAACAAAGGCGTTTAGTGAC GATTTCATAAGTAGTCAAGAGCAAGAAGACCTTCTCTGTTTGGCAATGGAGTTGGAATTA CTTCTTAATGGATTAAGTGGGAGAGATACTGCGCTTTGTGACGATTCGTTAGACAATGTT CCTCATCTGCAGCGACTTTTTGAGAACTGTGCCACCTTTGTTAAACGTGAGCGCCTTTTT ACCGTTGCTACAACCCGTGAGGCCGGTGTGGTAGGACACAGTAAGCACTTGGAACTGTGG CAGTGCAGAAGATGTAGCGTTAACAACAATGGTGGTTTCATAATATTCTGTGAAGTGTGT GGCGCGCCCCGCCAGCTTTCAGTGCTACTTCGTACATCTCGCACTGTTGCCGTTTGTGCT GCTAGTAACGAAACGGTTATTGACATTTCCGATGATGACGGTGATGATGGCTCCGCGACG TCAGCAGGAGAGGCAACGATTTCCCCCGGTGTCGTCTTCATAATTGATTAG
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  • Fasta :-

    MPVTTHFSSIGAKQSEVIETATTLGWTNDHQAQDYLQKLLIIGRPILRAHNWKIHRLKEF YPRSARLLGQNFNRGEEVCVRFRVPKEKNTFFPFHEVVCTFLHELAHCKYSKHDRHFWEL YTELSVECCRLDLNASLEREAAAPPDRRHTGSGRRLGGSRIVPLPREPEAMRRILSEAAE RRRQSSENGQCYGCAHDKTGVGSELNDGLWTCDNCDGVIDALRGKCEFCVEVGDSTEQVE EWSCKRCSFHNHCALVQCEACGRLKSGRTADGTNTVHTVKALAASSDHLLFTMTLGRVAD ALAPILQEMRWSVACLEEFAPPLKRVMSRSSFKNSNECDTLSIRLRSPNNPHEPLTFTCV LAHALHQLAHLTEKNHGANFVHAWIAMIHRFLTETKAFSDDFISSQEQEDLLCLAMELEL LLNGLSGRDTALCDDSLDNVPHLQRLFENCATFVKRERLFTVATTREAGVVGHSKHLELW QCRRCSVNNNGGFIIFCEVCGAPRQLSVLLRTSRTVAVCAASNETVIDISDDDGDDGSAT SAGEATISPGVVFIID

  • title: Zn binding site
  • coordinates: C212-C229
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.16260331 SMSRSSFKNS0.994unspTbg972.11.16260331 SMSRSSFKNS0.994unspTbg972.11.16260331 SMSRSSFKNS0.994unspTbg972.11.16260530 SVIDISDDDG0.996unspTbg972.11.16260541 SGSATSAGEA0.99unspTbg972.11.16260185 SRRRQSSENG0.998unspTbg972.11.16260186 SRRQSSENGQ0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India