Tbg972.11.18290 | peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:  GO:0008233      

  • Curated_GO_Functions:  peptidase activity      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.18290OTHER0.9293340.0697090.000957
No Results

  • Fasta :-

    >Tbg972.11.18290 MIGFVYNIVCMVRCRSRDVVEEEDAYVVGSGTYCGGGTAEMVKLAACKLLYFSYRCQFEP LRNGSTTDIGWGCTIRAGQMMLAHALMRYKNGGGASFEDSIVPSLKQATQHLFHDDPSAP FGIHAITNKGVQHGAPCGSWFGPTHVAVVMGALMEDYLSSGGQGPDVLVLRDRQVMEDEV RKILLLSKHVLLLIPVMLGPHHISEGYAKLLKRCLRMESTVGAVGGKEGSAFFFMGYQGG NLIVLDPHYAQSAFTCSDTQGKISGEWYTLPLTSCSTSVLLGFYIHSPDSFSQFTGDIKD ANSSLIFPLIEVTTSDCVGHIFSEDDPDVCSLVSFGDEESSGASQPVT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/795 Sequence name : 795 Sequence length : 348 VALUES OF COMPUTED PARAMETERS Coef20 : 4.796 CoefTot : -0.024 ChDiff : -13 ZoneTo : 17 KR : 3 DE : 0 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.653 2.118 0.302 0.698 MesoH : 0.187 0.491 -0.209 0.289 MuHd_075 : 19.359 8.852 6.070 1.971 MuHd_095 : 20.654 15.541 2.534 4.251 MuHd_100 : 22.378 18.630 3.555 5.600 MuHd_105 : 17.250 18.271 3.103 5.744 Hmax_075 : 4.317 14.817 3.708 3.593 Hmax_095 : 18.600 21.000 3.578 6.360 Hmax_100 : 18.000 22.700 4.122 6.560 Hmax_105 : 12.600 19.000 3.067 5.577 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8854 0.1146 DFMC : 0.9057 0.0943
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 348 Tbg972.11.18290 MIGFVYNIVCMVRCRSRDVVEEEDAYVVGSGTYCGGGTAEMVKLAACKLLYFSYRCQFEPLRNGSTTDIGWGCTIRAGQM 80 MLAHALMRYKNGGGASFEDSIVPSLKQATQHLFHDDPSAPFGIHAITNKGVQHGAPCGSWFGPTHVAVVMGALMEDYLSS 160 GGQGPDVLVLRDRQVMEDEVRKILLLSKHVLLLIPVMLGPHHISEGYAKLLKRCLRMESTVGAVGGKEGSAFFFMGYQGG 240 NLIVLDPHYAQSAFTCSDTQGKISGEWYTLPLTSCSTSVLLGFYIHSPDSFSQFTGDIKDANSSLIFPLIEVTTSDCVGH 320 IFSEDDPDVCSLVSFGDEESSGASQPVT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.18290 13 NIVCMVR|CR 0.075 . Tbg972.11.18290 15 VCMVRCR|SR 0.153 . Tbg972.11.18290 17 MVRCRSR|DV 0.202 . Tbg972.11.18290 43 GTAEMVK|LA 0.066 . Tbg972.11.18290 48 VKLAACK|LL 0.061 . Tbg972.11.18290 55 LLYFSYR|CQ 0.104 . Tbg972.11.18290 62 CQFEPLR|NG 0.072 . Tbg972.11.18290 76 GWGCTIR|AG 0.089 . Tbg972.11.18290 88 LAHALMR|YK 0.144 . Tbg972.11.18290 90 HALMRYK|NG 0.062 . Tbg972.11.18290 106 SIVPSLK|QA 0.087 . Tbg972.11.18290 129 IHAITNK|GV 0.102 . Tbg972.11.18290 171 PDVLVLR|DR 0.099 . Tbg972.11.18290 173 VLVLRDR|QV 0.123 . Tbg972.11.18290 181 VMEDEVR|KI 0.067 . Tbg972.11.18290 182 MEDEVRK|IL 0.071 . Tbg972.11.18290 188 KILLLSK|HV 0.064 . Tbg972.11.18290 209 ISEGYAK|LL 0.082 . Tbg972.11.18290 212 GYAKLLK|RC 0.059 . Tbg972.11.18290 213 YAKLLKR|CL 0.154 . Tbg972.11.18290 216 LLKRCLR|ME 0.298 . Tbg972.11.18290 227 VGAVGGK|EG 0.067 . Tbg972.11.18290 262 CSDTQGK|IS 0.067 . Tbg972.11.18290 299 QFTGDIK|DA 0.069 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.18290 ATGATTGGTTTCGTGTACAATATAGTGTGTATGGTTCGTTGTAGAAGTCGAGATGTGGTA GAGGAAGAAGATGCATACGTCGTTGGTTCAGGTACGTACTGTGGAGGTGGAACCGCGGAA ATGGTAAAGTTAGCGGCCTGCAAGCTACTGTATTTTTCTTATCGTTGCCAGTTTGAACCA CTGAGGAACGGCTCAACAACCGATATCGGGTGGGGGTGCACGATTCGTGCGGGTCAAATG ATGCTCGCCCACGCTTTAATGCGTTACAAGAACGGTGGCGGTGCTTCATTTGAGGATAGT ATTGTTCCTTCCCTAAAGCAAGCAACTCAGCACCTTTTCCATGATGATCCTTCGGCACCC TTTGGTATACATGCCATAACAAATAAGGGAGTACAGCACGGCGCCCCTTGTGGTAGCTGG TTTGGTCCCACCCACGTGGCGGTAGTTATGGGGGCCCTAATGGAGGATTATCTTAGCAGT GGTGGCCAAGGCCCGGACGTGCTTGTTCTTCGTGACCGACAAGTGATGGAAGATGAGGTG AGGAAGATACTCCTCCTTTCCAAACACGTGCTGTTGCTTATACCCGTGATGCTGGGACCT CATCATATTTCTGAGGGGTACGCCAAGTTGCTGAAGCGTTGCCTTCGAATGGAAAGCACT GTGGGTGCAGTTGGAGGGAAAGAAGGCTCTGCTTTCTTTTTCATGGGCTATCAGGGGGGA AATCTCATTGTCTTAGATCCTCATTATGCGCAAAGCGCTTTCACGTGTTCCGATACTCAA GGGAAGATCTCAGGTGAATGGTACACGTTGCCGCTGACCAGCTGTAGTACATCAGTGCTG CTTGGGTTTTATATTCATTCTCCCGACAGTTTTAGCCAATTCACGGGCGATATCAAAGAC GCAAACTCGTCATTAATATTCCCCCTTATTGAAGTCACTACGAGTGATTGCGTGGGTCAC ATCTTTAGTGAGGATGACCCCGACGTTTGTTCGCTCGTGTCGTTTGGAGACGAGGAGTCT TCTGGAGCATCCCAACCGGTTACCTAG
  • Download Fasta

  • Fasta :-

    MIGFVYNIVCMVRCRSRDVVEEEDAYVVGSGTYCGGGTAEMVKLAACKLLYFSYRCQFEP LRNGSTTDIGWGCTIRAGQMMLAHALMRYKNGGGASFEDSIVPSLKQATQHLFHDDPSAP FGIHAITNKGVQHGAPCGSWFGPTHVAVVMGALMEDYLSSGGQGPDVLVLRDRQVMEDEV RKILLLSKHVLLLIPVMLGPHHISEGYAKLLKRCLRMESTVGAVGGKEGSAFFFMGYQGG NLIVLDPHYAQSAFTCSDTQGKISGEWYTLPLTSCSTSVLLGFYIHSPDSFSQFTGDIKD ANSSLIFPLIEVTTSDCVGHIFSEDDPDVCSLVSFGDEESSGASQPVT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.1829065 SLRNGSTTDI0.994unspTbg972.11.18290264 SQGKISGEWY0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India