Tbg972.11.3520 | Der1-like family, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0097014      GO:0005737      GO:0005654      

  • Curated_GO_Components:  ciliary plasm      cytoplasm      nucleoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.3520OTHER0.9988420.0009350.000222
No Results

  • Fasta :-

    >Tbg972.11.3520 MDFNFLWEIPPVTRLLLCLSVISVVLVSFGLVHPLQMIFSPTLAFQEKHYWRLVSTFFYF GPLNLSSIIELHWLYMVSSSIELQYFH*RRLDYCLTLFTGAGLLLFLRSTRAIETPYLSN QFSKALVYLFGRLLPHQEASIFGLLTVQVRYLPLVFLLMSVMFGEVGIGTEVMADLVGHI LWYLLEIFPRITKIHPLRVQRYFIR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/244 Sequence name : 244 Sequence length : 205 VALUES OF COMPUTED PARAMETERS Coef20 : 4.232 CoefTot : 0.000 ChDiff : 3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.282 2.765 0.572 0.814 MesoH : 0.685 1.054 -0.107 0.462 MuHd_075 : 16.248 9.045 2.142 4.668 MuHd_095 : 12.028 12.531 2.634 3.519 MuHd_100 : 12.427 15.172 3.513 4.289 MuHd_105 : 17.319 18.102 5.334 5.192 Hmax_075 : 14.350 10.617 1.058 4.993 Hmax_095 : 9.975 14.700 0.976 5.031 Hmax_100 : 10.200 17.500 1.059 5.800 Hmax_105 : 16.200 18.200 2.733 5.970 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9081 0.0919 DFMC : 0.9770 0.0230
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 205 Tbg972.11.3520 MDFNFLWEIPPVTRLLLCLSVISVVLVSFGLVHPLQMIFSPTLAFQEKHYWRLVSTFFYFGPLNLSSIIELHWLYMVSSS 80 IELQYFHXRRLDYCLTLFTGAGLLLFLRSTRAIETPYLSNQFSKALVYLFGRLLPHQEASIFGLLTVQVRYLPLVFLLMS 160 VMFGEVGIGTEVMADLVGHILWYLLEIFPRITKIHPLRVQRYFIR 240 ................................................................................ 80 ................................................................................ 160 ............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.3520 14 EIPPVTR|LL 0.064 . Tbg972.11.3520 48 TLAFQEK|HY 0.083 . Tbg972.11.3520 52 QEKHYWR|LV 0.136 . Tbg972.11.3520 89 LQYFHXR|RL 0.117 . Tbg972.11.3520 90 QYFHXRR|LD 0.098 . Tbg972.11.3520 108 GLLLFLR|ST 0.128 . Tbg972.11.3520 111 LFLRSTR|AI 0.215 . Tbg972.11.3520 124 LSNQFSK|AL 0.074 . Tbg972.11.3520 132 LVYLFGR|LL 0.090 . Tbg972.11.3520 150 LLTVQVR|YL 0.085 . Tbg972.11.3520 190 LLEIFPR|IT 0.089 . Tbg972.11.3520 193 IFPRITK|IH 0.066 . Tbg972.11.3520 198 TKIHPLR|VQ 0.087 . Tbg972.11.3520 201 HPLRVQR|YF 0.278 . Tbg972.11.3520 205 VQRYFIR|-- 0.100 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.3520 ATGGACTTTAACTTTCTATGGGAGATACCGCCAGTAACAAGGCTGCTGCTGTGCCTTAGT GTGATCTCGGTTGTGCTAGTTTCGTTCGGCCTCGTCCACCCACTGCAGATGATTTTCAGT CCTACCCTCGCGTTCCAAGAAAAGCATTATTGGCGGCTGGTCTCAACATTCTTTTACTTT GGCCCCCTCAACCTCAGTAGTATTATCGAGTTACACTGGTTATATATGGTGAGCAGCAGC ATTGAATTGCAGTACTTCCACTGACGGCGTCTAGACTACTGCCTGACCCTCTTTACTGGG GCAGGGCTTTTACTTTTCCTCAGAAGCACTCGTGCTATAGAAACACCATACCTCAGTAAC CAGTTTTCGAAGGCGCTGGTGTATCTCTTTGGGCGGCTGCTGCCTCATCAGGAGGCGAGC ATTTTTGGTCTTTTGACGGTGCAGGTGCGATACCTCCCCCTTGTATTCCTTCTGATGAGC GTTATGTTCGGTGAAGTTGGTATTGGTACTGAAGTGATGGCTGATTTGGTGGGCCACATC CTGTGGTACCTACTGGAAATATTTCCACGCATTACGAAGATTCATCCCCTGCGCGTACAG CGCTACTTCATACGGTAG
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  • Fasta :-

    MDFNFLWEIPPVTRLLLCLSVISVVLVSFGLVHPLQMIFSPTLAFQEKHYWRLVSTFFYF GPLNLSSIIELHWLYMVSSSIELQYFH*RRLDYCLTLFTGAGLLLFLRSTRAIETPYLSN QFSKALVYLFGRLLPHQEASIFGLLTVQVRYLPLVFLLMSVMFGEVGIGTEVMADLVGHI LWYLLEIFPRITKIHPLRVQRYFIR

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India