Tbg972.11.7950 | proteasome alpha 7 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.7950OTHER0.9999890.0000060.000006
No Results

  • Fasta :-

    >Tbg972.11.7950 MSYDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTR KIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQ SSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGM TRDRCVHFAIKALLEAVESGSKNIELLVLERGKAAYMSDTELHRFVVEVEKEREEEAARR RRLAEED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/284 Sequence name : 284 Sequence length : 247 VALUES OF COMPUTED PARAMETERS Coef20 : 3.580 CoefTot : -0.045 ChDiff : -1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.165 1.235 -0.026 0.429 MesoH : -1.255 -0.050 -0.517 0.035 MuHd_075 : 28.919 14.664 6.446 4.721 MuHd_095 : 12.399 8.752 2.980 2.865 MuHd_100 : 14.983 13.569 5.107 4.806 MuHd_105 : 16.326 16.793 6.151 6.188 Hmax_075 : 13.650 10.150 1.599 4.130 Hmax_095 : 7.788 5.162 -0.059 3.614 Hmax_100 : 8.300 11.100 0.052 4.310 Hmax_105 : 4.500 10.600 -0.224 4.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9784 0.0216 DFMC : 0.9814 0.0186
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 247 Tbg972.11.7950 MSYDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADA 80 RVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAA 160 IGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVESGSKNIELLVLERGKAAYMSDTELHRFVVEVEKEREEEAARR 240 RRLAEED 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .P..... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.7950 5 --MSYDR|AI 0.082 . Tbg972.11.7950 27 YAQEAVR|KG 0.070 . Tbg972.11.7950 28 AQEAVRK|GL 0.121 . Tbg972.11.7950 36 LCAVGVK|GK 0.069 . Tbg972.11.7950 38 AVGVKGK|DS 0.073 . Tbg972.11.7950 47 IIFAVEK|KS 0.064 . Tbg972.11.7950 48 IFAVEKK|SV 0.333 . Tbg972.11.7950 52 EKKSVQK|LQ 0.059 . Tbg972.11.7950 57 QKLQDSR|TT 0.081 . Tbg972.11.7950 60 QDSRTTR|KI 0.353 . Tbg972.11.7950 61 DSRTTRK|IY 0.080 . Tbg972.11.7950 64 TTRKIYK|LD 0.072 . Tbg972.11.7950 81 GLSADAR|VV 0.124 . Tbg972.11.7950 93 AQLECQR|FR 0.079 . Tbg972.11.7950 95 LECQRFR|LS 0.077 . Tbg972.11.7950 109 DVDLLVR|YV 0.097 . Tbg972.11.7950 113 LVRYVAR|VQ 0.095 . Tbg972.11.7950 117 VARVQQR|ST 0.176 . Tbg972.11.7950 125 TQSSGSR|PY 0.119 . Tbg972.11.7950 146 GQPQLWK|TE 0.061 . Tbg972.11.7950 163 NAAAIGR|ND 0.095 . Tbg972.11.7950 166 AIGRNDK|VV 0.114 . Tbg972.11.7950 174 VLEFMEK|NY 0.060 . Tbg972.11.7950 182 YQDGMTR|DR 0.083 . Tbg972.11.7950 184 DGMTRDR|CV 0.126 . Tbg972.11.7950 191 CVHFAIK|AL 0.064 . Tbg972.11.7950 202 AVESGSK|NI 0.052 . Tbg972.11.7950 211 ELLVLER|GK 0.078 . Tbg972.11.7950 213 LVLERGK|AA 0.066 . Tbg972.11.7950 224 SDTELHR|FV 0.136 . Tbg972.11.7950 231 FVVEVEK|ER 0.057 . Tbg972.11.7950 233 VEVEKER|EE 0.083 . Tbg972.11.7950 239 REEEAAR|RR 0.077 . Tbg972.11.7950 240 EEEAARR|RR 0.107 . Tbg972.11.7950 241 EEAARRR|RL 0.112 . Tbg972.11.7950 242 EAARRRR|LA 0.553 *ProP* ____________________________^_________________

  • Fasta :-

    >Tbg972.11.7950 ATGAGCTACGATCGCGCAATTACTGTGTTTAGTCCCGATGGACATTTGTTCCAGGTTGAG TATGCGCAAGAGGCCGTTCGCAAGGGTCTCTGTGCAGTTGGTGTGAAAGGGAAGGACAGC ATTATCTTTGCTGTGGAGAAAAAATCAGTGCAAAAGCTGCAGGACAGTCGTACGACCCGA AAAATATACAAACTTGACGAGCATATTTATCTCGCTTCCGCAGGTCTCTCTGCCGACGCC CGTGTGGTTGTGAATCACGCACAACTGGAATGTCAACGCTTCCGCTTGAGCTACGAAGAC GCCATTGACGTTGACCTGCTCGTGCGGTACGTGGCAAGGGTACAGCAACGTTCTACGCAA TCAAGCGGCAGCAGACCGTACGGTGTTTCAACCATCATTGGTGGCTTTAATGAAAATGGG CAGCCGCAGTTGTGGAAGACGGAGCCGTCTGGAACGAGTTCAGCGTGGAATGCAGCAGCA ATCGGCCGAAATGATAAGGTTGTGCTCGAATTTATGGAAAAAAACTATCAGGATGGCATG ACGCGGGATCGTTGCGTGCACTTTGCAATTAAGGCGCTTCTTGAGGCTGTTGAAAGTGGG TCGAAAAACATTGAACTCCTGGTGCTGGAGCGCGGTAAGGCGGCTTACATGAGCGACACC GAATTGCACAGGTTCGTCGTTGAGGTAGAAAAAGAGCGCGAGGAGGAGGCCGCAAGGAGA AGGCGCCTTGCCGAAGAGGATTGA
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  • Fasta :-

    MSYDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTR KIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQ SSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGM TRDRCVHFAIKALLEAVESGSKNIELLVLERGKAAYMSDTELHRFVVEVEKEREEEAARR RRLAEED

  • title: active site
  • coordinates: L30,E46,K48,K61,R163
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.795097 SRFRLSYEDA0.998unspTbg972.11.7950122 SSTQSSGSRP0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India