Tbg972.11.8310 | proteasome beta 3 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.8310OTHER0.9926330.0066490.000717
No Results

  • Fasta :-

    >Tbg972.11.8310 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL SGYGAVAAIVTKDKLVTRLIKGRKD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/879 Sequence name : 879 Sequence length : 205 VALUES OF COMPUTED PARAMETERS Coef20 : 3.974 CoefTot : -0.158 ChDiff : -6 ZoneTo : 17 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.012 1.165 0.150 0.424 MesoH : -0.517 0.353 -0.244 0.243 MuHd_075 : 12.622 1.792 3.495 1.086 MuHd_095 : 16.768 14.321 6.337 3.978 MuHd_100 : 14.459 10.444 4.482 3.061 MuHd_105 : 8.158 4.440 2.430 1.778 Hmax_075 : 13.067 7.700 1.891 3.980 Hmax_095 : 14.600 15.200 4.331 4.810 Hmax_100 : 14.800 12.700 3.532 4.370 Hmax_105 : 11.600 7.200 1.228 3.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9774 0.0226 DFMC : 0.9453 0.0547
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 205 Tbg972.11.8310 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQQTFAQKVNFRTEMYKLREER 80 DINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEP 160 EELFEVAAQAMLSACDRDSLSGYGAVAAIVTKDKLVTRLIKGRKD 240 ................................................................................ 80 ................................................................................ 160 ............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.8310 17 CLAMAGK|EC 0.067 . Tbg972.11.8310 27 VVISDNR|LG 0.070 . Tbg972.11.8310 33 RLGEQLK|TI 0.074 . Tbg972.11.8310 41 ISMEVPK|LH 0.061 . Tbg972.11.8310 57 MGLTGLR|TD 0.069 . Tbg972.11.8310 66 QQTFAQK|VN 0.061 . Tbg972.11.8310 70 AQKVNFR|TE 0.092 . Tbg972.11.8310 75 FRTEMYK|LR 0.061 . Tbg972.11.8310 77 TEMYKLR|EE 0.101 . Tbg972.11.8310 80 YKLREER|DI 0.354 . Tbg972.11.8310 85 ERDINGK|AF 0.065 . Tbg972.11.8310 99 SMLYEAR|FG 0.084 . Tbg972.11.8310 114 VIGTIDR|KT 0.101 . Tbg972.11.8310 115 IGTIDRK|TG 0.076 . Tbg972.11.8310 155 MCEALWR|PG 0.081 . Tbg972.11.8310 177 MLSACDR|DS 0.136 . Tbg972.11.8310 192 VAAIVTK|DK 0.065 . Tbg972.11.8310 194 AIVTKDK|LV 0.074 . Tbg972.11.8310 198 KDKLVTR|LI 0.086 . Tbg972.11.8310 201 LVTRLIK|GR 0.109 . Tbg972.11.8310 203 TRLIKGR|KD 0.105 . Tbg972.11.8310 204 RLIKGRK|D- 0.102 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.8310 ATGTCCATTCTCACGTACAGCGGTGGCTCCTGCTTAGCCATGGCTGGCAAGGAGTGCTTT GTGGTGATTTCGGACAATCGCCTTGGTGAGCAACTTAAAACGATTTCTATGGAGGTTCCG AAGCTACACGTCATCAACGATGGGATTGTTATGGGACTCACGGGGCTCCGAACAGACCAG CAAACCTTCGCTCAGAAAGTTAACTTCCGGACCGAAATGTACAAACTCCGTGAGGAGCGG GACATTAACGGGAAGGCTTTCGCAGCTTTAGTGTCCTCTATGCTCTATGAGGCTCGGTTC GGCCCATGGTTCGTGGAGCCTGTGATTGGCACCATCGACCGCAAAACCGGTGAAGTATAT CTCTGCGCTACGGATCTCATCGGTGCCCCGTGCGAGCCAGAGGACTACGTCTGCGCTGGC ACCTGCGCTGAGAGTCTTCACGGTATGTGTGAGGCACTCTGGCGGCCTGGGCTTGAACCG GAGGAATTGTTTGAAGTTGCTGCGCAAGCAATGCTTTCTGCATGCGATAGGGATTCCCTC TCAGGTTACGGTGCGGTGGCTGCAATTGTAACAAAGGACAAATTGGTAACACGTCTCATC AAGGGTCGCAAAGACTAG
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  • Fasta :-

    MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL SGYGAVAAIVTKDKLVTRLIKGRKD

  • title: active site
  • coordinates: G9,D25,R27,K41,T141,D178,S181,G182
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India