Tbg972.11.8480 | major surface protease A, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.8480SP0.0069570.9928730.000170CS pos: 23-24. TAA-DD. Pr: 0.7995
No Results

  • Fasta :-

    >Tbg972.11.8480 MLHHKLDTVSVIALLLTLRGTAADDNITGEEEGTGHRCMHNDVAVPYDELPSMDVVHDLQ TAHVAEVSNNTEGEGNKSKSVERKNVRFHIKYALGETCKGIGMTVPTYIKGTTKECTEDD VLTKWKLRSVKVMMEAATKFLSSALLVDPLEAVNVPGGKCSGVQVPKMTVPNADYVVFVT INPRPEEETTTVAWAAACRKDTRSGRPVVGHINFIPAAIQRNPSSLAEHVAMHELAHAIG FSDIAETMLRAPNGLGAKGSQRVYRKGLGKAVTLITSPKVLKVAREYYGCPGLDGVEVED AGSEGTRGSHWKKRILFNEALVGSVTSGQLFFSPLTLAYFEDLGFYTANYSTAETGMTWG KGRGCDFLYQKCDSHPREWGEFCFRKEMFVSTCTLDRSSLGACDITTHPEDLPQLYRYFD DPRVGGSSAEMDYCPTVMGFVNAYCTAELGFAFMNVFGNEMGVHSLCYDSDVITSVFPNF PFAARCFPTTCTPSGQLLLRVQGRTVACPRDGKAGLGDTSKLKGVHGKVQCPPSENFCKN SGNGISKLQLASVADEVDGSSNTERIGHSLISPTPHTWNSEDMGSCSSRLACLKDIPPPF PACSLAARKVKECLGNDCPGSAQQWRYANEVGNSCLNPEGMVAMCMDGWRGVNELCGAVD PESKLGRSYRSMLPF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/225 Sequence name : 225 Sequence length : 675 VALUES OF COMPUTED PARAMETERS Coef20 : 4.264 CoefTot : 0.323 ChDiff : -9 ZoneTo : 23 KR : 2 DE : 1 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.512 1.424 0.136 0.549 MesoH : 0.296 0.525 -0.108 0.311 MuHd_075 : 15.016 11.676 5.072 4.342 MuHd_095 : 20.642 10.954 5.657 3.743 MuHd_100 : 17.072 9.892 4.639 2.640 MuHd_105 : 11.375 15.603 4.482 3.346 Hmax_075 : 16.800 21.700 3.610 6.207 Hmax_095 : 15.050 17.238 2.868 5.154 Hmax_100 : 12.600 18.000 2.192 4.920 Hmax_105 : 18.317 25.550 4.466 7.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9685 0.0315 DFMC : 0.9455 0.0545
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 675 Tbg972.11.8480 MLHHKLDTVSVIALLLTLRGTAADDNITGEEEGTGHRCMHNDVAVPYDELPSMDVVHDLQTAHVAEVSNNTEGEGNKSKS 80 VERKNVRFHIKYALGETCKGIGMTVPTYIKGTTKECTEDDVLTKWKLRSVKVMMEAATKFLSSALLVDPLEAVNVPGGKC 160 SGVQVPKMTVPNADYVVFVTINPRPEEETTTVAWAAACRKDTRSGRPVVGHINFIPAAIQRNPSSLAEHVAMHELAHAIG 240 FSDIAETMLRAPNGLGAKGSQRVYRKGLGKAVTLITSPKVLKVAREYYGCPGLDGVEVEDAGSEGTRGSHWKKRILFNEA 320 LVGSVTSGQLFFSPLTLAYFEDLGFYTANYSTAETGMTWGKGRGCDFLYQKCDSHPREWGEFCFRKEMFVSTCTLDRSSL 400 GACDITTHPEDLPQLYRYFDDPRVGGSSAEMDYCPTVMGFVNAYCTAELGFAFMNVFGNEMGVHSLCYDSDVITSVFPNF 480 PFAARCFPTTCTPSGQLLLRVQGRTVACPRDGKAGLGDTSKLKGVHGKVQCPPSENFCKNSGNGISKLQLASVADEVDGS 560 SNTERIGHSLISPTPHTWNSEDMGSCSSRLACLKDIPPPFPACSLAARKVKECLGNDCPGSAQQWRYANEVGNSCLNPEG 640 MVAMCMDGWRGVNELCGAVDPESKLGRSYRSMLPF 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .............................P..... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.8480 5 --MLHHK|LD 0.061 . Tbg972.11.8480 19 ALLLTLR|GT 0.075 . Tbg972.11.8480 37 EEGTGHR|CM 0.070 . Tbg972.11.8480 77 TEGEGNK|SK 0.087 . Tbg972.11.8480 79 GEGNKSK|SV 0.150 . Tbg972.11.8480 83 KSKSVER|KN 0.072 . Tbg972.11.8480 84 SKSVERK|NV 0.190 . Tbg972.11.8480 87 VERKNVR|FH 0.093 . Tbg972.11.8480 91 NVRFHIK|YA 0.083 . Tbg972.11.8480 99 ALGETCK|GI 0.081 . Tbg972.11.8480 110 TVPTYIK|GT 0.059 . Tbg972.11.8480 114 YIKGTTK|EC 0.059 . Tbg972.11.8480 124 EDDVLTK|WK 0.060 . Tbg972.11.8480 126 DVLTKWK|LR 0.070 . Tbg972.11.8480 128 LTKWKLR|SV 0.190 . Tbg972.11.8480 131 WKLRSVK|VM 0.121 . Tbg972.11.8480 139 MMEAATK|FL 0.074 . Tbg972.11.8480 159 VNVPGGK|CS 0.073 . Tbg972.11.8480 167 SGVQVPK|MT 0.070 . Tbg972.11.8480 184 FVTINPR|PE 0.072 . Tbg972.11.8480 199 AWAAACR|KD 0.086 . Tbg972.11.8480 200 WAAACRK|DT 0.127 . Tbg972.11.8480 203 ACRKDTR|SG 0.144 . Tbg972.11.8480 206 KDTRSGR|PV 0.408 . Tbg972.11.8480 221 IPAAIQR|NP 0.096 . Tbg972.11.8480 250 IAETMLR|AP 0.073 . Tbg972.11.8480 258 PNGLGAK|GS 0.064 . Tbg972.11.8480 262 GAKGSQR|VY 0.110 . Tbg972.11.8480 265 GSQRVYR|KG 0.334 . Tbg972.11.8480 266 SQRVYRK|GL 0.159 . Tbg972.11.8480 270 YRKGLGK|AV 0.079 . Tbg972.11.8480 279 TLITSPK|VL 0.069 . Tbg972.11.8480 282 TSPKVLK|VA 0.067 . Tbg972.11.8480 285 KVLKVAR|EY 0.096 . Tbg972.11.8480 307 AGSEGTR|GS 0.112 . Tbg972.11.8480 312 TRGSHWK|KR 0.071 . Tbg972.11.8480 313 RGSHWKK|RI 0.133 . Tbg972.11.8480 314 GSHWKKR|IL 0.327 . Tbg972.11.8480 361 TGMTWGK|GR 0.069 . Tbg972.11.8480 363 MTWGKGR|GC 0.100 . Tbg972.11.8480 371 CDFLYQK|CD 0.061 . Tbg972.11.8480 377 KCDSHPR|EW 0.094 . Tbg972.11.8480 385 WGEFCFR|KE 0.070 . Tbg972.11.8480 386 GEFCFRK|EM 0.095 . Tbg972.11.8480 397 STCTLDR|SS 0.110 . Tbg972.11.8480 417 DLPQLYR|YF 0.094 . Tbg972.11.8480 423 RYFDDPR|VG 0.081 . Tbg972.11.8480 485 NFPFAAR|CF 0.072 . Tbg972.11.8480 500 SGQLLLR|VQ 0.086 . Tbg972.11.8480 504 LLRVQGR|TV 0.144 . Tbg972.11.8480 510 RTVACPR|DG 0.127 . Tbg972.11.8480 513 ACPRDGK|AG 0.079 . Tbg972.11.8480 521 GLGDTSK|LK 0.070 . Tbg972.11.8480 523 GDTSKLK|GV 0.090 . Tbg972.11.8480 528 LKGVHGK|VQ 0.069 . Tbg972.11.8480 539 PSENFCK|NS 0.080 . Tbg972.11.8480 547 SGNGISK|LQ 0.064 . Tbg972.11.8480 565 GSSNTER|IG 0.102 . Tbg972.11.8480 589 MGSCSSR|LA 0.111 . Tbg972.11.8480 594 SRLACLK|DI 0.077 . Tbg972.11.8480 608 ACSLAAR|KV 0.147 . Tbg972.11.8480 609 CSLAARK|VK 0.072 . Tbg972.11.8480 611 LAARKVK|EC 0.123 . Tbg972.11.8480 626 GSAQQWR|YA 0.222 . Tbg972.11.8480 650 MCMDGWR|GV 0.121 . Tbg972.11.8480 664 AVDPESK|LG 0.056 . Tbg972.11.8480 667 PESKLGR|SY 0.183 . Tbg972.11.8480 670 KLGRSYR|SM 0.531 *ProP* ____________________________^_________________

  • Fasta :-

    >Tbg972.11.8480 ATGCTTCACCATAAATTAGATACAGTGAGCGTCATCGCACTCTTGTTGACACTCCGTGGT ACCGCCGCTGACGACAACATCACTGGGGAGGAAGAGGGGACAGGACACCGATGCATGCAC AATGATGTTGCCGTTCCATACGATGAGCTTCCCTCCATGGACGTCGTTCATGATTTGCAA ACGGCACACGTGGCGGAGGTTTCCAACAATACTGAAGGTGAGGGAAACAAGAGCAAAAGT GTTGAACGGAAAAACGTGCGGTTTCACATAAAATACGCGTTAGGCGAGACCTGCAAAGGA ATCGGAATGACTGTTCCCACCTACATCAAGGGAACTACCAAGGAATGCACCGAGGATGAT GTGCTGACGAAATGGAAACTTCGCTCTGTCAAGGTCATGATGGAGGCTGCTACAAAATTT CTTAGTTCTGCGCTTCTTGTAGATCCCCTGGAAGCGGTGAACGTTCCAGGGGGTAAGTGC TCAGGGGTTCAGGTCCCCAAAATGACCGTACCGAATGCGGATTACGTTGTGTTTGTGACG ATCAACCCACGACCAGAAGAGGAAACCACGACAGTCGCGTGGGCCGCTGCGTGTCGGAAA GATACTCGGTCAGGTAGACCTGTCGTGGGCCACATCAATTTCATCCCCGCTGCCATCCAA CGGAACCCATCAAGTCTTGCTGAACATGTGGCTATGCACGAGCTCGCGCATGCCATCGGC TTTAGTGATATTGCTGAAACGATGTTAAGAGCACCTAATGGATTGGGTGCGAAAGGCTCG CAAAGAGTGTATCGTAAAGGACTGGGGAAAGCGGTCACACTTATTACATCGCCCAAGGTT CTGAAGGTCGCCCGGGAGTACTATGGTTGCCCCGGCCTTGATGGTGTTGAGGTTGAGGAT GCTGGAAGTGAGGGCACGCGGGGCTCGCACTGGAAGAAACGAATTTTGTTTAACGAGGCC CTCGTTGGTAGTGTAACGTCCGGGCAGCTTTTTTTTTCTCCTCTAACTCTCGCTTACTTT GAGGACCTTGGATTTTACACGGCCAACTACTCCACCGCAGAGACGGGCATGACCTGGGGG AAGGGCAGAGGGTGCGACTTTTTGTATCAGAAGTGCGATAGTCATCCCCGGGAGTGGGGA GAGTTCTGTTTTCGTAAAGAAATGTTCGTGTCCACCTGTACATTGGACCGAAGCAGCTTA GGGGCGTGCGATATTACAACTCACCCCGAGGATCTCCCTCAGCTTTATCGGTACTTTGAT GATCCTCGAGTTGGCGGCTCCTCCGCGGAGATGGATTATTGTCCCACCGTAATGGGGTTT GTTAATGCGTACTGTACTGCGGAGCTAGGTTTTGCTTTTATGAACGTCTTTGGTAATGAA ATGGGTGTGCACAGTCTGTGTTATGACTCCGACGTCATCACAAGTGTGTTTCCCAACTTC CCCTTCGCGGCACGATGCTTTCCAACAACGTGTACACCCTCTGGACAGCTTTTGCTGCGT GTGCAGGGGCGTACGGTTGCGTGCCCACGTGACGGTAAAGCGGGATTGGGTGACACCTCG AAGTTGAAGGGTGTTCACGGTAAGGTCCAATGCCCCCCTAGTGAGAACTTTTGCAAAAAT TCTGGTAATGGTATTTCTAAGCTGCAGCTTGCGTCGGTTGCGGACGAGGTGGATGGTAGT TCAAACACGGAAAGAATCGGACACTCACTTATATCTCCTACACCGCATACGTGGAACAGT GAAGACATGGGGAGCTGCAGCAGTCGCCTCGCTTGTCTGAAAGATATTCCGCCCCCCTTT CCGGCGTGCAGCCTGGCTGCAAGGAAGGTGAAGGAGTGTCTCGGGAATGATTGCCCAGGG AGTGCGCAGCAATGGCGATATGCAAATGAAGTAGGTAATAGTTGCTTGAACCCAGAGGGT ATGGTGGCCATGTGTATGGATGGCTGGAGAGGTGTAAATGAATTGTGTGGGGCAGTAGAT CCTGAATCCAAGTTGGGACGAAGCTACCGATCGATGCTTCCCTTCTAA
  • Download Fasta

  • Fasta :-

    MLHHKLDTVSVIALLLTLRGTAADDNITGEEEGTGHRCMHNDVAVPYDELPSMDVVHDLQ TAHVAEVSNNTEGEGNKSKSVERKNVRFHIKYALGETCKGIGMTVPTYIKGTTKECTEDD VLTKWKLRSVKVMMEAATKFLSSALLVDPLEAVNVPGGKCSGVQVPKMTVPNADYVVFVT INPRPEEETTTVAWAAACRKDTRSGRPVVGHINFIPAAIQRNPSSLAEHVAMHELAHAIG FSDIAETMLRAPNGLGAKGSQRVYRKGLGKAVTLITSPKVLKVAREYYGCPGLDGVEVED AGSEGTRGSHWKKRILFNEALVGSVTSGQLFFSPLTLAYFEDLGFYTANYSTAETGMTWG KGRGCDFLYQKCDSHPREWGEFCFRKEMFVSTCTLDRSSLGACDITTHPEDLPQLYRYFD DPRVGGSSAEMDYCPTVMGFVNAYCTAELGFAFMNVFGNEMGVHSLCYDSDVITSVFPNF PFAARCFPTTCTPSGQLLLRVQGRTVACPRDGKAGLGDTSKLKGVHGKVQCPPSENFCKN SGNGISKLQLASVADEVDGSSNTERIGHSLISPTPHTWNSEDMGSCSSRLACLKDIPPPF PACSLAARKVKECLGNDCPGSAQQWRYANEVGNSCLNPEGMVAMCMDGWRGVNELCGAVD PESKLGRSYRSMLPF

    No Results
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.11.848080 SNKSKSVERK0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India