Tbg972.3.1750 | CHAP domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.3.1750SP0.3206220.6781480.001230CS pos: 31-32. GGG-SP. Pr: 0.4902
No Results

  • Fasta :-

    >Tbg972.3.1750 MVSLNRKQKFQLAVPATLLLFLFVYVLLGGGSPQKSKRHGMHMDFNPLEHCNAPMDSVVG YSSDVPSMSNCHRHWLSETYAYTTIGYPHEVMKKMPYGSEWKRAPTGLCWTADEFVARYL LHTRGIFVYFGGSRHDLYWENLKFFGSSGMHRLYERINFENKVEVRTTKRRKRHTPLVGD VVVWNSDYKAYFPRGHVAVVVKVEDDVSAAGGEAALRELKKERRQPSLVYIAEQNFDNKN WEGRNFSRVLKFTWMRGDRASLEDPDGPPLMGHVRVGKLLEDASFFGDL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/653 Sequence name : 653 Sequence length : 289 VALUES OF COMPUTED PARAMETERS Coef20 : 4.420 CoefTot : -1.328 ChDiff : 8 ZoneTo : 43 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.635 0.411 0.881 MesoH : -0.375 0.053 -0.404 0.180 MuHd_075 : 19.744 15.874 5.229 4.534 MuHd_095 : 20.396 10.061 6.294 3.259 MuHd_100 : 20.870 9.909 6.178 3.762 MuHd_105 : 20.928 12.325 5.819 4.368 Hmax_075 : 12.000 26.367 1.562 3.320 Hmax_095 : 9.200 21.800 0.390 2.080 Hmax_100 : 9.000 24.000 0.488 2.460 Hmax_105 : 5.250 23.567 0.736 1.803 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9560 0.0440 DFMC : 0.8698 0.1302
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 289 Tbg972.3.1750 MVSLNRKQKFQLAVPATLLLFLFVYVLLGGGSPQKSKRHGMHMDFNPLEHCNAPMDSVVGYSSDVPSMSNCHRHWLSETY 80 AYTTIGYPHEVMKKMPYGSEWKRAPTGLCWTADEFVARYLLHTRGIFVYFGGSRHDLYWENLKFFGSSGMHRLYERINFE 160 NKVEVRTTKRRKRHTPLVGDVVVWNSDYKAYFPRGHVAVVVKVEDDVSAAGGEAALRELKKERRQPSLVYIAEQNFDNKN 240 WEGRNFSRVLKFTWMRGDRASLEDPDGPPLMGHVRVGKLLEDASFFGDL 320 ................................................................................ 80 ................................................................................ 160 ............P................................................................... 240 ................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.3.1750 6 -MVSLNR|KQ 0.069 . Tbg972.3.1750 7 MVSLNRK|QK 0.084 . Tbg972.3.1750 9 SLNRKQK|FQ 0.246 . Tbg972.3.1750 35 GGGSPQK|SK 0.097 . Tbg972.3.1750 37 GSPQKSK|RH 0.068 . Tbg972.3.1750 38 SPQKSKR|HG 0.305 . Tbg972.3.1750 73 SMSNCHR|HW 0.108 . Tbg972.3.1750 93 YPHEVMK|KM 0.071 . Tbg972.3.1750 94 PHEVMKK|MP 0.099 . Tbg972.3.1750 102 PYGSEWK|RA 0.066 . Tbg972.3.1750 103 YGSEWKR|AP 0.181 . Tbg972.3.1750 118 ADEFVAR|YL 0.130 . Tbg972.3.1750 124 RYLLHTR|GI 0.103 . Tbg972.3.1750 134 VYFGGSR|HD 0.069 . Tbg972.3.1750 143 LYWENLK|FF 0.072 . Tbg972.3.1750 152 GSSGMHR|LY 0.118 . Tbg972.3.1750 156 MHRLYER|IN 0.083 . Tbg972.3.1750 162 RINFENK|VE 0.054 . Tbg972.3.1750 166 ENKVEVR|TT 0.084 . Tbg972.3.1750 169 VEVRTTK|RR 0.093 . Tbg972.3.1750 170 EVRTTKR|RK 0.117 . Tbg972.3.1750 171 VRTTKRR|KR 0.140 . Tbg972.3.1750 172 RTTKRRK|RH 0.075 . Tbg972.3.1750 173 TTKRRKR|HT 0.640 *ProP* Tbg972.3.1750 189 VWNSDYK|AY 0.070 . Tbg972.3.1750 194 YKAYFPR|GH 0.130 . Tbg972.3.1750 202 HVAVVVK|VE 0.067 . Tbg972.3.1750 217 GGEAALR|EL 0.092 . Tbg972.3.1750 220 AALRELK|KE 0.084 . Tbg972.3.1750 221 ALRELKK|ER 0.083 . Tbg972.3.1750 223 RELKKER|RQ 0.072 . Tbg972.3.1750 224 ELKKERR|QP 0.121 . Tbg972.3.1750 239 EQNFDNK|NW 0.068 . Tbg972.3.1750 244 NKNWEGR|NF 0.139 . Tbg972.3.1750 248 EGRNFSR|VL 0.078 . Tbg972.3.1750 251 NFSRVLK|FT 0.178 . Tbg972.3.1750 256 LKFTWMR|GD 0.110 . Tbg972.3.1750 259 TWMRGDR|AS 0.210 . Tbg972.3.1750 275 PLMGHVR|VG 0.078 . Tbg972.3.1750 278 GHVRVGK|LL 0.162 . ____________________________^_________________

  • Fasta :-

    >Tbg972.3.1750 ATGGTGTCTCTAAACCGAAAACAGAAGTTTCAGCTCGCTGTGCCGGCTACTCTCCTGCTT TTTCTATTCGTCTACGTTCTCCTCGGTGGGGGGTCCCCGCAGAAATCAAAGAGACATGGG ATGCATATGGATTTCAACCCACTTGAGCATTGCAACGCTCCCATGGACTCTGTTGTAGGT TATAGTTCAGACGTCCCTTCTATGAGCAACTGCCACCGCCACTGGCTGTCAGAGACATAC GCCTACACTACAATTGGTTATCCACATGAAGTAATGAAGAAAATGCCGTATGGGTCCGAG TGGAAGCGAGCACCAACTGGGTTGTGTTGGACCGCGGATGAGTTTGTTGCTCGCTACCTT TTACACACCCGAGGAATTTTCGTCTATTTCGGTGGAAGCAGACACGATTTGTACTGGGAG AACCTCAAGTTTTTTGGTTCAAGCGGGATGCACCGTCTATACGAGCGGATTAACTTCGAA AATAAGGTGGAGGTCAGGACAACGAAGAGGCGCAAGCGGCACACACCGCTCGTGGGCGAT GTTGTGGTATGGAACTCGGACTATAAGGCATACTTTCCACGCGGCCACGTTGCCGTGGTT GTGAAGGTGGAAGATGACGTATCTGCTGCTGGTGGAGAGGCGGCACTTCGCGAACTGAAG AAGGAGCGTCGACAGCCCTCACTTGTCTACATCGCTGAACAAAACTTCGATAACAAGAAC TGGGAGGGGAGAAACTTTTCAAGGGTGCTCAAATTCACATGGATGCGCGGAGATCGAGCT TCTTTGGAAGACCCTGATGGACCGCCTCTCATGGGCCACGTGCGCGTTGGAAAACTTTTA GAGGACGCGAGTTTCTTCGGTGACTTGTGA
  • Download Fasta

  • Fasta :-

    MVSLNRKQKFQLAVPATLLLFLFVYVLLGGGSPQKSKRHGMHMDFNPLEHCNAPMDSVVG YSSDVPSMSNCHRHWLSETYAYTTIGYPHEVMKKMPYGSEWKRAPTGLCWTADEFVARYL LHTRGIFVYFGGSRHDLYWENLKFFGSSGMHRLYERINFENKVEVRTTKRRKRHTPLVGD VVVWNSDYKAYFPRGHVAVVVKVEDDVSAAGGEAALRELKKERRQPSLVYIAEQNFDNKN WEGRNFSRVLKFTWMRGDRASLEDPDGPPLMGHVRVGKLLEDASFFGDL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.3.1750168 TEVRTTKRRK0.99unspTbg972.3.1750261 SGDRASLEDP0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India