Tbg972.3.400 | proteasome alpha 7 subunit

_IDPredictionOTHERSPmTPCS_Position
Tbg972.3.400OTHER0.9999510.0000480.000001
No Results

  • Fasta :-

    >Tbg972.3.400 MSGSGHDQSTDIFSADGRVFQVEYACKAVDNGSTAVAACCKDGVVVAVEKILTSRMLEEG SNNRIHAVDRQAGICVCGVLPDGLAVVSRARGEAENSRDIFSTPILGSLLASRIGEFMHV YTTHYAYRPFGCSVIIASYADDGPQLYVADPSGAVAGYYGIALGKGKTVAKTELEKLDFA TLTCSEAVEKLTNILHEVHDKSKDKIYEVEVAWVCDKSDRTFVHVPKEMVPHPTPAS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/382 Sequence name : 382 Sequence length : 237 VALUES OF COMPUTED PARAMETERS Coef20 : 3.485 CoefTot : -0.515 ChDiff : -8 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.206 1.788 0.403 0.606 MesoH : -0.089 0.443 -0.193 0.296 MuHd_075 : 18.167 3.341 4.601 0.817 MuHd_095 : 27.879 12.577 5.519 5.139 MuHd_100 : 24.900 11.441 4.876 4.872 MuHd_105 : 18.002 8.460 3.610 3.939 Hmax_075 : 9.800 1.167 0.282 1.630 Hmax_095 : 7.437 2.888 -0.601 2.572 Hmax_100 : 5.100 3.700 -0.847 2.460 Hmax_105 : 6.200 2.700 -0.518 1.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9719 0.0281 DFMC : 0.9827 0.0173
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 237 Tbg972.3.400 MSGSGHDQSTDIFSADGRVFQVEYACKAVDNGSTAVAACCKDGVVVAVEKILTSRMLEEGSNNRIHAVDRQAGICVCGVL 80 PDGLAVVSRARGEAENSRDIFSTPILGSLLASRIGEFMHVYTTHYAYRPFGCSVIIASYADDGPQLYVADPSGAVAGYYG 160 IALGKGKTVAKTELEKLDFATLTCSEAVEKLTNILHEVHDKSKDKIYEVEVAWVCDKSDRTFVHVPKEMVPHPTPAS 240 ................................................................................ 80 ................................................................................ 160 ............................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.3.400 18 IFSADGR|VF 0.085 . Tbg972.3.400 27 QVEYACK|AV 0.081 . Tbg972.3.400 41 AVAACCK|DG 0.064 . Tbg972.3.400 50 VVVAVEK|IL 0.059 . Tbg972.3.400 55 EKILTSR|ML 0.099 . Tbg972.3.400 64 EEGSNNR|IH 0.069 . Tbg972.3.400 70 RIHAVDR|QA 0.170 . Tbg972.3.400 89 GLAVVSR|AR 0.175 . Tbg972.3.400 91 AVVSRAR|GE 0.075 . Tbg972.3.400 98 GEAENSR|DI 0.103 . Tbg972.3.400 113 GSLLASR|IG 0.073 . Tbg972.3.400 128 TTHYAYR|PF 0.127 . Tbg972.3.400 165 YGIALGK|GK 0.063 . Tbg972.3.400 167 IALGKGK|TV 0.079 . Tbg972.3.400 171 KGKTVAK|TE 0.064 . Tbg972.3.400 176 AKTELEK|LD 0.060 . Tbg972.3.400 190 CSEAVEK|LT 0.061 . Tbg972.3.400 201 LHEVHDK|SK 0.107 . Tbg972.3.400 203 EVHDKSK|DK 0.077 . Tbg972.3.400 205 HDKSKDK|IY 0.079 . Tbg972.3.400 217 VAWVCDK|SD 0.074 . Tbg972.3.400 220 VCDKSDR|TF 0.084 . Tbg972.3.400 227 TFVHVPK|EM 0.065 . ____________________________^_________________

  • Fasta :-

    >Tbg972.3.400 ATGTCTGGCTCTGGTCATGACCAGTCAACAGATATATTTTCTGCTGACGGGCGTGTGTTT CAGGTAGAGTACGCCTGCAAGGCTGTCGACAATGGCAGCACCGCCGTTGCTGCCTGTTGC AAGGACGGTGTTGTCGTTGCTGTGGAGAAAATCCTCACAAGCCGCATGCTGGAGGAAGGG TCCAATAACCGTATTCATGCGGTAGATCGGCAGGCTGGAATTTGTGTTTGTGGAGTGCTC CCCGATGGTCTTGCTGTTGTTTCACGCGCTCGTGGTGAAGCAGAGAACAGTCGAGATATT TTTTCCACACCGATACTAGGCTCCTTGCTTGCGTCTCGAATCGGCGAGTTTATGCACGTT TACACGACTCACTACGCCTATCGCCCCTTCGGCTGTTCGGTCATCATTGCCTCTTATGCT GACGATGGCCCGCAGCTTTATGTGGCCGACCCGAGCGGGGCAGTTGCGGGGTACTATGGA ATAGCGTTGGGGAAGGGCAAAACGGTGGCCAAAACCGAGTTGGAGAAGCTGGACTTTGCG ACTCTGACATGCAGTGAGGCGGTGGAAAAGCTAACCAACATCCTCCATGAGGTGCATGAC AAGTCGAAAGATAAAATTTATGAGGTGGAGGTGGCATGGGTGTGCGACAAGTCCGACCGC ACCTTCGTGCATGTGCCGAAGGAAATGGTACCGCATCCAACCCCCGCATCATAG
  • Download Fasta

  • Fasta :-

    MSGSGHDQSTDIFSADGRVFQVEYACKAVDNGSTAVAACCKDGVVVAVEKILTSRMLEEG SNNRIHAVDRQAGICVCGVLPDGLAVVSRARGEAENSRDIFSTPILGSLLASRIGEFMHV YTTHYAYRPFGCSVIIASYADDGPQLYVADPSGAVAGYYGIALGKGKTVAKTELEKLDFA TLTCSEAVEKLTNILHEVHDKSKDKIYEVEVAWVCDKSDRTFVHVPKEMVPHPTPAS

    No Results
  • title: active site
  • coordinates: S33,E49,I51,R64,K165
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India