Tbg972.3.5500 | signal peptide peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.3.5500OTHER0.9987690.0009090.000322
No Results

  • Fasta :-

    >Tbg972.3.5500 MPSPSETIQLSIALAYLMASAVTIVYMGSQRLLRETIKMKKRSGNQSEVMKTGDAMMMPL MGSVVLFSVYVVLRFVPREYFNSIVSFYLSIFGVFSLGSFVKTYTRPNVLTGCFCCVAGG LYYITGNWVVNNILATGIAVSAISSIHLGSFKSSFVLLLGLFFYDIFWVFGSDVMLMVAS GVDGPIKMVFPRDIFGGCKSMSLLGLGDLIIPGFFIGQTLVFSSQYVKKGSLYFNVALTA YGLSLVNTMAVMVIFDHGQPALLFIVPWLLVSFSITAVIQGDYKAAWEYTSDAVTEPDNS STDKVKSEEGDQRGTGDEMGLGDFLVKQMKGLFVWDGEEEEEEVCEGTKKND
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/733 Sequence name : 733 Sequence length : 352 VALUES OF COMPUTED PARAMETERS Coef20 : 4.176 CoefTot : 0.391 ChDiff : -7 ZoneTo : 34 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.271 2.359 0.548 0.890 MesoH : 1.181 1.317 0.124 0.563 MuHd_075 : 24.157 15.051 5.230 5.519 MuHd_095 : 29.398 22.133 8.019 7.998 MuHd_100 : 28.996 21.038 7.526 7.670 MuHd_105 : 23.779 16.662 6.104 5.765 Hmax_075 : 17.500 24.150 2.697 5.346 Hmax_095 : 16.800 19.862 3.385 5.880 Hmax_100 : 17.300 19.600 3.501 6.440 Hmax_105 : 16.333 19.600 3.066 5.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6949 0.3051 DFMC : 0.7431 0.2569
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 352 Tbg972.3.5500 MPSPSETIQLSIALAYLMASAVTIVYMGSQRLLRETIKMKKRSGNQSEVMKTGDAMMMPLMGSVVLFSVYVVLRFVPREY 80 FNSIVSFYLSIFGVFSLGSFVKTYTRPNVLTGCFCCVAGGLYYITGNWVVNNILATGIAVSAISSIHLGSFKSSFVLLLG 160 LFFYDIFWVFGSDVMLMVASGVDGPIKMVFPRDIFGGCKSMSLLGLGDLIIPGFFIGQTLVFSSQYVKKGSLYFNVALTA 240 YGLSLVNTMAVMVIFDHGQPALLFIVPWLLVSFSITAVIQGDYKAAWEYTSDAVTEPDNSSTDKVKSEEGDQRGTGDEMG 320 LGDFLVKQMKGLFVWDGEEEEEEVCEGTKKND 400 .........................................P...................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.3.5500 31 VYMGSQR|LL 0.083 . Tbg972.3.5500 34 GSQRLLR|ET 0.264 . Tbg972.3.5500 38 LLRETIK|MK 0.071 . Tbg972.3.5500 40 RETIKMK|KR 0.066 . Tbg972.3.5500 41 ETIKMKK|RS 0.095 . Tbg972.3.5500 42 TIKMKKR|SG 0.510 *ProP* Tbg972.3.5500 51 NQSEVMK|TG 0.078 . Tbg972.3.5500 74 SVYVVLR|FV 0.131 . Tbg972.3.5500 78 VLRFVPR|EY 0.110 . Tbg972.3.5500 102 SLGSFVK|TY 0.061 . Tbg972.3.5500 106 FVKTYTR|PN 0.064 . Tbg972.3.5500 152 IHLGSFK|SS 0.080 . Tbg972.3.5500 187 GVDGPIK|MV 0.072 . Tbg972.3.5500 192 IKMVFPR|DI 0.272 . Tbg972.3.5500 199 DIFGGCK|SM 0.070 . Tbg972.3.5500 228 FSSQYVK|KG 0.064 . Tbg972.3.5500 229 SSQYVKK|GS 0.114 . Tbg972.3.5500 284 VIQGDYK|AA 0.067 . Tbg972.3.5500 304 DNSSTDK|VK 0.083 . Tbg972.3.5500 306 SSTDKVK|SE 0.098 . Tbg972.3.5500 313 SEEGDQR|GT 0.141 . Tbg972.3.5500 327 LGDFLVK|QM 0.057 . Tbg972.3.5500 330 FLVKQMK|GL 0.070 . Tbg972.3.5500 349 EVCEGTK|KN 0.060 . Tbg972.3.5500 350 VCEGTKK|ND 0.084 . ____________________________^_________________

  • Fasta :-

    >Tbg972.3.5500 ATGCCGAGTCCATCTGAAACAATACAGTTAAGTATAGCCCTTGCCTATCTTATGGCTAGT GCTGTGACGATTGTCTACATGGGCAGCCAGAGACTTCTTAGAGAGACAATCAAAATGAAG AAACGAAGTGGCAACCAAAGTGAAGTAATGAAAACAGGGGATGCTATGATGATGCCTTTA ATGGGGTCAGTCGTGTTGTTCAGCGTGTATGTTGTACTGAGATTTGTTCCTAGGGAGTAT TTCAACTCCATAGTTTCATTCTACCTGAGTATCTTTGGTGTATTCTCTCTTGGCTCATTT GTTAAGACGTACACTCGTCCCAATGTTTTAACTGGCTGCTTTTGCTGCGTGGCAGGAGGG TTATATTACATAACCGGGAATTGGGTGGTGAATAACATATTAGCCACAGGTATAGCTGTT TCGGCGATCAGTTCGATACATTTGGGTTCTTTTAAGAGCTCTTTTGTTCTTCTCCTGGGC TTATTTTTCTATGATATATTTTGGGTGTTCGGATCTGATGTTATGCTCATGGTCGCAAGC GGTGTAGATGGACCAATCAAAATGGTTTTCCCAAGGGATATCTTCGGTGGTTGTAAGTCG ATGAGCCTTTTGGGTCTTGGTGACCTTATCATTCCGGGGTTCTTTATCGGCCAGACACTG GTATTTTCCTCTCAGTATGTAAAGAAGGGCAGTCTTTACTTCAATGTTGCCCTCACTGCA TATGGTTTGAGTTTAGTGAACACGATGGCGGTAATGGTGATATTTGATCACGGTCAGCCA GCGCTTCTTTTTATTGTTCCTTGGCTTCTAGTTTCCTTTTCCATTACTGCCGTTATTCAA GGCGATTACAAGGCTGCATGGGAATATACATCCGATGCCGTGACGGAGCCGGACAACTCA TCGACTGATAAGGTGAAGTCTGAAGAGGGGGATCAACGGGGCACAGGGGACGAGATGGGG CTGGGCGACTTTTTAGTGAAGCAAATGAAGGGACTTTTTGTCTGGGACGGCGAAGAAGAA GAGGAGGAGGTATGTGAGGGAACAAAAAAGAATGACTAG
  • Download Fasta

  • Fasta :-

    MPSPSETIQLSIALAYLMASAVTIVYMGSQRLLRETIKMKKRSGNQSEVMKTGDAMMMPL MGSVVLFSVYVVLRFVPREYFNSIVSFYLSIFGVFSLGSFVKTYTRPNVLTGCFCCVAGG LYYITGNWVVNNILATGIAVSAISSIHLGSFKSSFVLLLGLFFYDIFWVFGSDVMLMVAS GVDGPIKMVFPRDIFGGCKSMSLLGLGDLIIPGFFIGQTLVFSSQYVKKGSLYFNVALTA YGLSLVNTMAVMVIFDHGQPALLFIVPWLLVSFSITAVIQGDYKAAWEYTSDAVTEPDNS STDKVKSEEGDQRGTGDEMGLGDFLVKQMKGLFVWDGEEEEEEVCEGTKKND

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.3.5500300 SEPDNSSTDK0.996unspTbg972.3.5500307 SDKVKSEEGD0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India