Tbg972.4.170 | proteasome beta 7 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.4.170OTHER0.9430970.0204510.036453
No Results

  • Fasta :-

    >Tbg972.4.170 MASGGSVIGLKYNGGVLLASDTLLSYGSLAKWPNIPRIKIIGPHTAVCATGDYADFQDMT EQLESHVERQRRYINDVLRPDEIFCYLHRHIYHKRSNFEPCLCSFVVCGCQGGVPFLGGI DSVGTQWRDDCVATGYGAYIAIPLLRKALEKPGGLSREEAVEVIKNCLRVLFYRECRAIN KFQIADATNDAVEIGKPFEVETNWEYEGFCFEKTAIIR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/740 Sequence name : 740 Sequence length : 218 VALUES OF COMPUTED PARAMETERS Coef20 : 3.573 CoefTot : -2.025 ChDiff : -3 ZoneTo : 51 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.653 1.688 0.564 0.604 MesoH : -0.603 0.394 -0.225 0.211 MuHd_075 : 23.150 18.016 6.426 4.930 MuHd_095 : 13.658 12.873 4.077 3.804 MuHd_100 : 14.403 9.072 4.598 3.183 MuHd_105 : 23.310 11.944 5.649 4.228 Hmax_075 : 13.533 11.200 2.540 5.980 Hmax_095 : 12.400 11.500 2.435 3.800 Hmax_100 : 10.300 10.900 1.812 4.300 Hmax_105 : 10.967 16.450 2.898 3.733 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9397 0.0603 DFMC : 0.9374 0.0626
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 218 Tbg972.4.170 MASGGSVIGLKYNGGVLLASDTLLSYGSLAKWPNIPRIKIIGPHTAVCATGDYADFQDMTEQLESHVERQRRYINDVLRP 80 DEIFCYLHRHIYHKRSNFEPCLCSFVVCGCQGGVPFLGGIDSVGTQWRDDCVATGYGAYIAIPLLRKALEKPGGLSREEA 160 VEVIKNCLRVLFYRECRAINKFQIADATNDAVEIGKPFEVETNWEYEGFCFEKTAIIR 240 .......................................................................P........ 80 ................................................................................ 160 .......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.4.170 11 GSVIGLK|YN 0.082 . Tbg972.4.170 31 SYGSLAK|WP 0.058 . Tbg972.4.170 37 KWPNIPR|IK 0.100 . Tbg972.4.170 39 PNIPRIK|II 0.076 . Tbg972.4.170 69 LESHVER|QR 0.126 . Tbg972.4.170 71 SHVERQR|RY 0.070 . Tbg972.4.170 72 HVERQRR|YI 0.628 *ProP* Tbg972.4.170 79 YINDVLR|PD 0.083 . Tbg972.4.170 89 IFCYLHR|HI 0.104 . Tbg972.4.170 94 HRHIYHK|RS 0.067 . Tbg972.4.170 95 RHIYHKR|SN 0.250 . Tbg972.4.170 128 SVGTQWR|DD 0.129 . Tbg972.4.170 146 IAIPLLR|KA 0.099 . Tbg972.4.170 147 AIPLLRK|AL 0.076 . Tbg972.4.170 151 LRKALEK|PG 0.072 . Tbg972.4.170 157 KPGGLSR|EE 0.072 . Tbg972.4.170 165 EAVEVIK|NC 0.059 . Tbg972.4.170 169 VIKNCLR|VL 0.070 . Tbg972.4.170 174 LRVLFYR|EC 0.106 . Tbg972.4.170 177 LFYRECR|AI 0.246 . Tbg972.4.170 181 ECRAINK|FQ 0.062 . Tbg972.4.170 196 DAVEIGK|PF 0.069 . Tbg972.4.170 213 EGFCFEK|TA 0.069 . Tbg972.4.170 218 EKTAIIR|-- 0.085 . ____________________________^_________________

  • Fasta :-

    >Tbg972.4.170 ATGGCATCTGGAGGATCTGTTATTGGTCTGAAATATAACGGTGGTGTCCTGTTGGCTAGC GACACACTTTTATCGTATGGATCCCTTGCGAAATGGCCAAATATCCCGCGTATTAAAATC ATAGGCCCCCATACCGCCGTGTGTGCTACTGGCGACTACGCTGACTTTCAAGATATGACT GAACAACTTGAGAGTCATGTGGAGCGACAGCGGAGATACATCAATGATGTGCTTAGGCCT GATGAAATATTTTGTTATCTCCACCGGCATATTTACCATAAACGCTCCAATTTTGAGCCA TGCCTTTGCAGTTTTGTTGTCTGTGGTTGTCAAGGAGGAGTTCCATTTCTTGGTGGAATT GACAGTGTGGGGACGCAATGGAGGGATGACTGCGTGGCTACGGGATATGGAGCATATATT GCAATTCCACTACTACGGAAGGCGCTTGAAAAACCTGGTGGACTCTCACGTGAGGAGGCG GTGGAGGTTATCAAAAACTGTCTTCGTGTTCTTTTCTACCGGGAGTGCCGCGCCATCAAC AAGTTTCAAATTGCAGATGCGACAAATGACGCTGTGGAGATTGGCAAGCCGTTTGAAGTA GAAACAAATTGGGAGTACGAGGGGTTCTGCTTTGAGAAAACAGCCATTATTCGATGA
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  • Fasta :-

    MASGGSVIGLKYNGGVLLASDTLLSYGSLAKWPNIPRIKIIGPHTAVCATGDYADFQDMT EQLESHVERQRRYINDVLRPDEIFCYLHRHIYHKRSNFEPCLCSFVVCGCQGGVPFLGGI DSVGTQWRDDCVATGYGAYIAIPLLRKALEKPGGLSREEAVEVIKNCLRVLFYRECRAIN KFQIADATNDAVEIGKPFEVETNWEYEGFCFEKTAIIR

  • title: active site
  • coordinates: G5,D21,L23,R37,Y136,E175,A178,I179
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.4.170156 SPGGLSREEA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India