Tbg972.5.3790 | otubain cysteine peptidase, Clan CA, family C65, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0016579      

  • Computed_GO_Processes:  protein deubiquitination      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.5.3790OTHER0.9997990.0001300.000070
No Results

  • Fasta :-

    >Tbg972.5.3790 MSEHATTDLEGRYAQLATIQSEIDAAPLLSPTVEKLGDGCNLMIEFSDNPPMLVKVVSLW RNEETKYKGIRYARRDGNCFYRSVVFGMHESLLNNKERAGAHLERITDLSRQVVADYGNF AEDFCHPAVEMAKKIESGECSTVEQLYELSTNGEAEYALYFYRYAVSHHIRTHENDFLPF VVGMGHETVSEFCSAEVDAVASEADNVQVVAFAQCFDVRVIVEYVDGREGDCTTRHTFQQ KDSHDANEYTTIEVTLLYRPGHYDLLYK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/378 Sequence name : 378 Sequence length : 268 VALUES OF COMPUTED PARAMETERS Coef20 : 3.683 CoefTot : 0.112 ChDiff : -20 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.665 1.476 -0.071 0.465 MesoH : -0.909 0.248 -0.452 0.187 MuHd_075 : 19.041 8.592 4.063 3.234 MuHd_095 : 21.032 16.553 6.327 4.386 MuHd_100 : 12.124 12.861 4.839 3.040 MuHd_105 : 3.938 6.628 2.400 2.038 Hmax_075 : 4.083 2.683 -1.617 2.508 Hmax_095 : 11.637 9.013 1.162 3.596 Hmax_100 : 9.900 8.400 1.192 3.470 Hmax_105 : 7.000 3.967 -1.525 1.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9762 0.0238 DFMC : 0.9704 0.0296
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 268 Tbg972.5.3790 MSEHATTDLEGRYAQLATIQSEIDAAPLLSPTVEKLGDGCNLMIEFSDNPPMLVKVVSLWRNEETKYKGIRYARRDGNCF 80 YRSVVFGMHESLLNNKERAGAHLERITDLSRQVVADYGNFAEDFCHPAVEMAKKIESGECSTVEQLYELSTNGEAEYALY 160 FYRYAVSHHIRTHENDFLPFVVGMGHETVSEFCSAEVDAVASEADNVQVVAFAQCFDVRVIVEYVDGREGDCTTRHTFQQ 240 KDSHDANEYTTIEVTLLYRPGHYDLLYK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.5.3790 12 TTDLEGR|YA 0.103 . Tbg972.5.3790 35 LSPTVEK|LG 0.064 . Tbg972.5.3790 55 NPPMLVK|VV 0.072 . Tbg972.5.3790 61 KVVSLWR|NE 0.083 . Tbg972.5.3790 66 WRNEETK|YK 0.081 . Tbg972.5.3790 68 NEETKYK|GI 0.079 . Tbg972.5.3790 71 TKYKGIR|YA 0.141 . Tbg972.5.3790 74 KGIRYAR|RD 0.248 . Tbg972.5.3790 75 GIRYARR|DG 0.175 . Tbg972.5.3790 82 DGNCFYR|SV 0.248 . Tbg972.5.3790 96 ESLLNNK|ER 0.052 . Tbg972.5.3790 98 LLNNKER|AG 0.132 . Tbg972.5.3790 105 AGAHLER|IT 0.105 . Tbg972.5.3790 111 RITDLSR|QV 0.087 . Tbg972.5.3790 133 PAVEMAK|KI 0.080 . Tbg972.5.3790 134 AVEMAKK|IE 0.117 . Tbg972.5.3790 163 YALYFYR|YA 0.089 . Tbg972.5.3790 171 AVSHHIR|TH 0.104 . Tbg972.5.3790 219 AQCFDVR|VI 0.088 . Tbg972.5.3790 228 VEYVDGR|EG 0.077 . Tbg972.5.3790 235 EGDCTTR|HT 0.099 . Tbg972.5.3790 241 RHTFQQK|DS 0.087 . Tbg972.5.3790 259 EVTLLYR|PG 0.066 . Tbg972.5.3790 268 HYDLLYK|-- 0.061 . ____________________________^_________________

  • Fasta :-

    >Tbg972.5.3790 ATGTCAGAGCATGCAACGACCGATTTAGAAGGCAGATATGCCCAGTTGGCCACAATTCAG AGCGAAATCGACGCAGCACCACTACTTTCCCCTACTGTCGAGAAACTCGGAGACGGCTGT AACTTAATGATTGAATTTTCTGACAACCCGCCGATGCTCGTCAAAGTTGTTTCCCTCTGG AGGAACGAAGAAACCAAATACAAGGGTATACGCTATGCACGCCGCGATGGGAACTGTTTC TACCGTTCAGTGGTGTTTGGCATGCATGAGTCGCTACTGAACAATAAGGAGCGTGCCGGT GCCCACCTTGAGCGGATTACGGACCTCAGTAGGCAAGTTGTGGCCGATTACGGCAACTTT GCCGAAGATTTCTGCCATCCCGCCGTGGAAATGGCTAAGAAAATAGAGTCGGGTGAGTGC TCAACGGTGGAGCAGCTGTATGAACTGTCCACTAATGGAGAAGCGGAGTACGCACTCTAC TTCTACCGATATGCTGTGTCACATCATATTCGTACACATGAAAATGACTTTCTGCCGTTT GTAGTTGGAATGGGCCACGAAACGGTGTCGGAGTTCTGCTCAGCGGAAGTTGATGCGGTC GCGAGTGAGGCAGATAATGTGCAGGTGGTGGCCTTCGCACAATGCTTCGACGTGCGCGTT ATTGTGGAGTATGTGGATGGCAGAGAAGGCGACTGCACTACACGGCATACATTTCAGCAA AAGGACTCACACGACGCTAACGAGTACACCACTATCGAGGTAACGCTACTCTATCGACCG GGTCATTACGACCTTCTTTACAAGTAG
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  • Fasta :-

    MSEHATTDLEGRYAQLATIQSEIDAAPLLSPTVEKLGDGCNLMIEFSDNPPMLVKVVSLW RNEETKYKGIRYARRDGNCFYRSVVFGMHESLLNNKERAGAHLERITDLSRQVVADYGNF AEDFCHPAVEMAKKIESGECSTVEQLYELSTNGEAEYALYFYRYAVSHHIRTHENDFLPF VVGMGHETVSEFCSAEVDAVASEADNVQVVAFAQCFDVRVIVEYVDGREGDCTTRHTFQQ KDSHDANEYTTIEVTLLYRPGHYDLLYK

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India