Tbg972.5.4490 | signal peptidase type I, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.5.4490OTHER0.9826140.0047000.012686
No Results

  • Fasta :-

    >Tbg972.5.4490 MSLLHRADATALRILREQHVESLAMSAQTGPINYIKKTFKDIVDTMPDRRNTFLMLVTLC TFFVGWRTAIAVTDCESPLVVVLSGSMEPFMFRGDLLVLHNIGEPTMGDVVVFSLPNRTI PIVHRVHRIRLLEDGVTRLYLTKGDNNEMDDRTLYPRGYHWVEKKDIIGKVAVLVPRVGF ITLIAEDHSWAKLVLVPLALIWCWYTGM
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/641 Sequence name : 641 Sequence length : 208 VALUES OF COMPUTED PARAMETERS Coef20 : 4.471 CoefTot : 0.393 ChDiff : 1 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.524 1.824 0.227 0.635 MesoH : 0.267 0.916 -0.128 0.371 MuHd_075 : 21.085 7.164 3.977 3.565 MuHd_095 : 33.251 22.153 9.281 8.035 MuHd_100 : 35.198 20.985 8.186 8.948 MuHd_105 : 31.592 16.164 5.879 8.410 Hmax_075 : 10.617 11.667 0.247 4.398 Hmax_095 : 10.600 16.000 1.560 5.090 Hmax_100 : 10.600 16.000 1.560 5.090 Hmax_105 : 4.900 11.500 0.226 4.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5812 0.4188 DFMC : 0.6877 0.3123
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 208 Tbg972.5.4490 MSLLHRADATALRILREQHVESLAMSAQTGPINYIKKTFKDIVDTMPDRRNTFLMLVTLCTFFVGWRTAIAVTDCESPLV 80 VVLSGSMEPFMFRGDLLVLHNIGEPTMGDVVVFSLPNRTIPIVHRVHRIRLLEDGVTRLYLTKGDNNEMDDRTLYPRGYH 160 WVEKKDIIGKVAVLVPRVGFITLIAEDHSWAKLVLVPLALIWCWYTGM 240 ................................................................................ 80 ................................................................................ 160 ................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.5.4490 6 -MSLLHR|AD 0.107 . Tbg972.5.4490 13 ADATALR|IL 0.089 . Tbg972.5.4490 16 TALRILR|EQ 0.150 . Tbg972.5.4490 36 GPINYIK|KT 0.072 . Tbg972.5.4490 37 PINYIKK|TF 0.153 . Tbg972.5.4490 40 YIKKTFK|DI 0.082 . Tbg972.5.4490 49 VDTMPDR|RN 0.067 . Tbg972.5.4490 50 DTMPDRR|NT 0.121 . Tbg972.5.4490 67 TFFVGWR|TA 0.103 . Tbg972.5.4490 93 MEPFMFR|GD 0.088 . Tbg972.5.4490 118 VFSLPNR|TI 0.092 . Tbg972.5.4490 125 TIPIVHR|VH 0.078 . Tbg972.5.4490 128 IVHRVHR|IR 0.181 . Tbg972.5.4490 130 HRVHRIR|LL 0.159 . Tbg972.5.4490 138 LEDGVTR|LY 0.078 . Tbg972.5.4490 143 TRLYLTK|GD 0.070 . Tbg972.5.4490 152 NNEMDDR|TL 0.084 . Tbg972.5.4490 157 DRTLYPR|GY 0.116 . Tbg972.5.4490 164 GYHWVEK|KD 0.073 . Tbg972.5.4490 165 YHWVEKK|DI 0.165 . Tbg972.5.4490 170 KKDIIGK|VA 0.060 . Tbg972.5.4490 177 VAVLVPR|VG 0.083 . Tbg972.5.4490 192 EDHSWAK|LV 0.069 . ____________________________^_________________

  • Fasta :-

    >Tbg972.5.4490 ATGTCATTGCTGCATCGGGCTGATGCGACGGCGCTGCGGATTTTGCGTGAGCAGCATGTG GAATCATTAGCCATGTCTGCACAAACAGGACCCATTAATTACATTAAAAAAACTTTTAAG GACATTGTTGATACAATGCCGGACAGACGCAACACCTTCTTAATGTTGGTAACTCTCTGC ACATTCTTTGTTGGTTGGCGTACAGCCATCGCAGTGACCGATTGTGAAAGCCCACTTGTT GTGGTGCTCTCAGGAAGTATGGAACCCTTCATGTTTCGTGGTGACTTACTTGTTCTGCAT AATATTGGCGAACCCACGATGGGGGATGTCGTTGTTTTCTCTCTCCCCAACCGTACAATT CCAATCGTTCATCGCGTCCATCGCATTCGATTACTTGAGGACGGTGTGACTCGTTTGTAC CTCACGAAAGGGGATAACAATGAAATGGATGACCGCACATTATATCCTCGCGGATATCAT TGGGTAGAGAAAAAAGATATCATTGGGAAAGTTGCCGTGCTGGTGCCGCGGGTGGGTTTT ATTACGCTAATTGCCGAAGACCACTCATGGGCAAAACTTGTGCTTGTTCCACTGGCATTG ATATGGTGCTGGTACACCGGAATGTAA
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  • Fasta :-

    MSLLHRADATALRILREQHVESLAMSAQTGPINYIKKTFKDIVDTMPDRRNTFLMLVTLC TFFVGWRTAIAVTDCESPLVVVLSGSMEPFMFRGDLLVLHNIGEPTMGDVVVFSLPNRTI PIVHRVHRIRLLEDGVTRLYLTKGDNNEMDDRTLYPRGYHWVEKKDIIGKVAVLVPRVGF ITLIAEDHSWAKLVLVPLALIWCWYTGM

  • title: Catalytic site
  • coordinates: S86,H124
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India