Tbg972.6.1380 | cysteine peptidase, Clan CA, family C54, putative

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.1380OTHER0.9991830.0007780.000039
No Results

  • Fasta :-

    >Tbg972.6.1380 MERLKNFVHSVVGCDAHIEYPCCVLGTIQREPQQLDEHLENSFYLFTYRRYFDPLPYSTL TSDKGWGCLARATQMLLACSLRRHSAQDCKLQYFADLDDEQVAPFSLHCMVRHILKQGES LRPVYWAPSQGCEAISGCVKRATERGILSSPLSVVITVAGAVPAEEVSCHLKESRNVLIL APLRCGASRCMSQKMFLSLEHLLLAPESVGMVGGVPNRGYYIIGTGAQELLLYLDPHCKT QDALLSGEPGETGVVKPTSSNLRSVPYGQVDTSFFLGFFVDSQSRWESLQKRIEGLSKQK LHPIVSVYRGGPHTPVDLLVMEWPTEP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/197 Sequence name : 197 Sequence length : 327 VALUES OF COMPUTED PARAMETERS Coef20 : 3.507 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.776 1.853 0.355 0.655 MesoH : -0.195 0.660 -0.209 0.256 MuHd_075 : 8.017 9.351 3.638 2.736 MuHd_095 : 18.957 23.199 7.984 5.185 MuHd_100 : 23.706 27.490 9.779 6.499 MuHd_105 : 28.914 26.962 10.023 6.875 Hmax_075 : 9.917 13.300 2.441 4.632 Hmax_095 : 6.700 17.500 1.177 5.320 Hmax_100 : 9.000 19.300 2.966 5.640 Hmax_105 : 20.200 23.900 5.405 6.830 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9653 0.0347 DFMC : 0.9842 0.0158
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 327 Tbg972.6.1380 MERLKNFVHSVVGCDAHIEYPCCVLGTIQREPQQLDEHLENSFYLFTYRRYFDPLPYSTLTSDKGWGCLARATQMLLACS 80 LRRHSAQDCKLQYFADLDDEQVAPFSLHCMVRHILKQGESLRPVYWAPSQGCEAISGCVKRATERGILSSPLSVVITVAG 160 AVPAEEVSCHLKESRNVLILAPLRCGASRCMSQKMFLSLEHLLLAPESVGMVGGVPNRGYYIIGTGAQELLLYLDPHCKT 240 QDALLSGEPGETGVVKPTSSNLRSVPYGQVDTSFFLGFFVDSQSRWESLQKRIEGLSKQKLHPIVSVYRGGPHTPVDLLV 320 MEWPTEP 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.1380 3 ----MER|LK 0.073 . Tbg972.6.1380 5 --MERLK|NF 0.058 . Tbg972.6.1380 30 VLGTIQR|EP 0.076 . Tbg972.6.1380 49 FYLFTYR|RY 0.080 . Tbg972.6.1380 50 YLFTYRR|YF 0.141 . Tbg972.6.1380 64 STLTSDK|GW 0.070 . Tbg972.6.1380 71 GWGCLAR|AT 0.117 . Tbg972.6.1380 82 LLACSLR|RH 0.089 . Tbg972.6.1380 83 LACSLRR|HS 0.107 . Tbg972.6.1380 90 HSAQDCK|LQ 0.059 . Tbg972.6.1380 112 SLHCMVR|HI 0.158 . Tbg972.6.1380 116 MVRHILK|QG 0.065 . Tbg972.6.1380 122 KQGESLR|PV 0.140 . Tbg972.6.1380 140 AISGCVK|RA 0.064 . Tbg972.6.1380 141 ISGCVKR|AT 0.438 . Tbg972.6.1380 145 VKRATER|GI 0.095 . Tbg972.6.1380 172 EVSCHLK|ES 0.068 . Tbg972.6.1380 175 CHLKESR|NV 0.090 . Tbg972.6.1380 184 LILAPLR|CG 0.063 . Tbg972.6.1380 189 LRCGASR|CM 0.129 . Tbg972.6.1380 194 SRCMSQK|MF 0.078 . Tbg972.6.1380 218 VGGVPNR|GY 0.106 . Tbg972.6.1380 239 YLDPHCK|TQ 0.064 . Tbg972.6.1380 256 GETGVVK|PT 0.086 . Tbg972.6.1380 263 PTSSNLR|SV 0.220 . Tbg972.6.1380 285 FVDSQSR|WE 0.072 . Tbg972.6.1380 291 RWESLQK|RI 0.064 . Tbg972.6.1380 292 WESLQKR|IE 0.191 . Tbg972.6.1380 298 RIEGLSK|QK 0.062 . Tbg972.6.1380 300 EGLSKQK|LH 0.054 . Tbg972.6.1380 309 PIVSVYR|GG 0.077 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.1380 ATGGAGCGTCTGAAAAATTTTGTACACTCCGTTGTCGGTTGTGACGCACACATTGAGTAT CCGTGTTGTGTTCTTGGCACGATCCAAAGGGAGCCTCAGCAGTTGGACGAGCACCTTGAG AATTCCTTTTACCTCTTCACCTACCGCAGGTATTTCGATCCTCTTCCTTATTCTACGCTT ACGTCAGACAAGGGATGGGGTTGCCTGGCACGCGCTACGCAAATGCTTTTGGCTTGCAGT CTGCGGAGACACAGCGCACAAGACTGTAAGTTACAATACTTCGCCGATTTGGATGATGAA CAAGTAGCGCCTTTTTCTTTGCACTGCATGGTGCGCCACATACTGAAGCAAGGTGAGTCG CTCCGACCCGTCTACTGGGCACCAAGTCAGGGATGTGAGGCTATTAGTGGTTGCGTTAAA AGAGCAACGGAAAGGGGAATTCTTTCGAGTCCACTTAGTGTTGTCATTACAGTGGCTGGT GCTGTTCCAGCAGAAGAGGTAAGTTGCCATCTGAAGGAGTCGCGAAACGTTCTTATACTC GCGCCCTTACGTTGTGGTGCAAGCCGTTGCATGAGTCAAAAAATGTTTCTTTCACTGGAG CATCTGTTGCTTGCACCGGAGAGTGTTGGAATGGTGGGCGGTGTCCCTAACCGTGGGTAT TATATCATCGGTACTGGGGCACAGGAATTATTGCTTTATTTGGATCCTCACTGCAAGACA CAAGATGCTTTGTTGTCGGGTGAGCCAGGCGAAACGGGGGTTGTGAAGCCAACATCGAGT AACTTGCGGTCTGTTCCATATGGTCAAGTGGACACTTCATTTTTTTTAGGGTTCTTTGTT GATTCCCAATCGCGTTGGGAAAGTCTTCAAAAGCGAATCGAAGGACTTTCAAAGCAGAAA CTGCATCCGATAGTGTCTGTGTATCGTGGTGGACCCCATACCCCAGTGGATTTATTAGTA ATGGAGTGGCCAACTGAACCATGA
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  • Fasta :-

    MERLKNFVHSVVGCDAHIEYPCCVLGTIQREPQQLDEHLENSFYLFTYRRYFDPLPYSTL TSDKGWGCLARATQMLLACSLRRHSAQDCKLQYFADLDDEQVAPFSLHCMVRHILKQGES LRPVYWAPSQGCEAISGCVKRATERGILSSPLSVVITVAGAVPAEEVSCHLKESRNVLIL APLRCGASRCMSQKMFLSLEHLLLAPESVGMVGGVPNRGYYIIGTGAQELLLYLDPHCKT QDALLSGEPGETGVVKPTSSNLRSVPYGQVDTSFFLGFFVDSQSRWESLQKRIEGLSKQK LHPIVSVYRGGPHTPVDLLVMEWPTEP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.6.138085 SLRRHSAQDC0.998unspTbg972.6.1380192 SSRCMSQKMF0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India