Tbg972.6.1980 | DJ-1 family protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0097014      GO:0005737      

  • Curated_GO_Components:  ciliary plasm      cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.1980OTHER0.9997080.0002610.000031
No Results

  • Fasta :-

    >Tbg972.6.1980 MPKVLVPIAEGTEDIELSCITDILRRANFQVTVSSVMESTTVRLCRGLVLIADSLIKDES GEGYDGVFLPGGLPGADYLGKSVALKKILEDVRAAGKWYGAICASPVVSFEPMGLLRDVK TITCYPGLKDKVPSHVQWSADPVVRCGKCLTSMGPGTAIAFALSIVTVLATKDIAEKLAK DLLVYDSPVINQMFSKF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/782 Sequence name : 782 Sequence length : 197 VALUES OF COMPUTED PARAMETERS Coef20 : 3.421 CoefTot : -0.356 ChDiff : -1 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.982 1.794 0.343 0.688 MesoH : -0.106 0.545 -0.187 0.261 MuHd_075 : 9.767 8.338 2.597 2.459 MuHd_095 : 24.329 16.093 6.666 4.436 MuHd_100 : 33.142 18.514 9.078 5.494 MuHd_105 : 38.142 19.957 10.507 6.180 Hmax_075 : 5.483 12.250 0.197 4.643 Hmax_095 : 8.000 14.700 0.897 4.850 Hmax_100 : 17.200 17.800 3.499 6.070 Hmax_105 : 15.000 14.200 2.434 5.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9543 0.0457 DFMC : 0.9423 0.0577
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 197 Tbg972.6.1980 MPKVLVPIAEGTEDIELSCITDILRRANFQVTVSSVMESTTVRLCRGLVLIADSLIKDESGEGYDGVFLPGGLPGADYLG 80 KSVALKKILEDVRAAGKWYGAICASPVVSFEPMGLLRDVKTITCYPGLKDKVPSHVQWSADPVVRCGKCLTSMGPGTAIA 160 FALSIVTVLATKDIAEKLAKDLLVYDSPVINQMFSKF 240 ................................................................................ 80 ................................................................................ 160 ..................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.1980 3 ----MPK|VL 0.066 . Tbg972.6.1980 25 CITDILR|RA 0.072 . Tbg972.6.1980 26 ITDILRR|AN 0.137 . Tbg972.6.1980 43 MESTTVR|LC 0.083 . Tbg972.6.1980 46 TTVRLCR|GL 0.291 . Tbg972.6.1980 57 IADSLIK|DE 0.068 . Tbg972.6.1980 81 GADYLGK|SV 0.086 . Tbg972.6.1980 86 GKSVALK|KI 0.071 . Tbg972.6.1980 87 KSVALKK|IL 0.152 . Tbg972.6.1980 93 KILEDVR|AA 0.103 . Tbg972.6.1980 97 DVRAAGK|WY 0.070 . Tbg972.6.1980 117 EPMGLLR|DV 0.165 . Tbg972.6.1980 120 GLLRDVK|TI 0.110 . Tbg972.6.1980 129 TCYPGLK|DK 0.065 . Tbg972.6.1980 131 YPGLKDK|VP 0.072 . Tbg972.6.1980 145 SADPVVR|CG 0.079 . Tbg972.6.1980 148 PVVRCGK|CL 0.127 . Tbg972.6.1980 172 VTVLATK|DI 0.064 . Tbg972.6.1980 177 TKDIAEK|LA 0.063 . Tbg972.6.1980 180 IAEKLAK|DL 0.069 . Tbg972.6.1980 196 INQMFSK|F- 0.082 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.1980 ATGCCCAAGGTTCTCGTTCCCATTGCGGAGGGAACTGAAGACATTGAACTGTCTTGCATA ACGGACATTTTGCGTCGTGCTAACTTCCAGGTTACCGTGTCGTCCGTTATGGAGTCTACA ACCGTTCGCTTGTGCAGGGGCCTCGTACTTATAGCTGACTCATTGATTAAGGATGAGTCT GGCGAAGGGTATGATGGCGTTTTTCTTCCCGGTGGTTTACCTGGTGCTGACTACCTTGGG AAAAGTGTGGCTCTCAAAAAGATCCTTGAGGATGTCCGTGCCGCAGGGAAATGGTACGGA GCCATCTGTGCCTCGCCCGTGGTTTCATTCGAGCCCATGGGTTTGCTGCGGGATGTCAAG ACTATCACGTGTTACCCCGGATTGAAGGACAAAGTCCCCTCGCATGTGCAGTGGAGTGCA GACCCTGTCGTTCGCTGCGGCAAGTGCTTGACGAGCATGGGACCTGGAACAGCAATTGCA TTTGCTCTTTCGATCGTTACTGTTCTCGCGACGAAGGATATTGCGGAGAAACTGGCGAAG GACCTGCTTGTTTACGACAGCCCCGTGATTAATCAAATGTTCAGTAAGTTTTAG
  • Download Fasta

  • Fasta :-

    MPKVLVPIAEGTEDIELSCITDILRRANFQVTVSSVMESTTVRLCRGLVLIADSLIKDES GEGYDGVFLPGGLPGADYLGKSVALKKILEDVRAAGKWYGAICASPVVSFEPMGLLRDVK TITCYPGLKDKVPSHVQWSADPVVRCGKCLTSMGPGTAIAFALSIVTVLATKDIAEKLAK DLLVYDSPVINQMFSKF

  • title: conserved cys residue
  • coordinates: C103
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India