Tbg972.6.710 | metacaspase MCA2, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005634      

  • Curated_GO_Components:  nucleus      

  • Curated_GO_Function_IDs:  GO:0008233      

  • Curated_GO_Functions:  peptidase activity      

  • Curated_GO_Processes:  aerobic respiration      proteolysis      

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.710OTHER0.9849360.0128510.002213
No Results

  • Fasta :-

    >Tbg972.6.710 MCSLITQLCDAGQLADYVGLGWLNAVSSQPYLVQALGLQPPPRRVDVDAAFRDAEGLHGH QPWVATPLPGRTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKKGLPINEAVILVDED NFPGRTDQPTRDNIVRYMAWLVKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVD FQKSGCIVDDDIHKLLFSRLPEKVRLTAVFDCCHSGSIMDLPFTYVCSGGEQASGTPHMK RIREGNDVLGDVMMISGCADEQTSADVKNTATFGTGSTGAGGAATQCITCMLMNNQSLSY GKLLIETRDMLKRKGFKQVPQLSASKAIDLDQTFSLTEMFSVDRSVQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/91 Sequence name : 91 Sequence length : 347 VALUES OF COMPUTED PARAMETERS Coef20 : 3.784 CoefTot : 0.201 ChDiff : -6 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.447 1.000 0.271 0.519 MesoH : -0.430 0.188 -0.300 0.190 MuHd_075 : 13.548 16.609 4.562 3.579 MuHd_095 : 8.138 7.094 1.541 2.499 MuHd_100 : 21.081 19.120 5.083 5.544 MuHd_105 : 31.059 27.895 8.936 7.776 Hmax_075 : 10.733 17.850 3.418 4.830 Hmax_095 : 7.900 12.600 2.016 4.440 Hmax_100 : 16.300 17.200 3.199 5.960 Hmax_105 : 15.900 16.600 5.769 4.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7484 0.2516 DFMC : 0.7551 0.2449
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 347 Tbg972.6.710 MCSLITQLCDAGQLADYVGLGWLNAVSSQPYLVQALGLQPPPRRVDVDAAFRDAEGLHGHQPWVATPLPGRTVRALFIGI 80 NYYGTSAALSGCCNDVKQMLATLQKKGLPINEAVILVDEDNFPGRTDQPTRDNIVRYMAWLVKDAKPGDVLFFHYSGHGT 160 QCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKLLFSRLPEKVRLTAVFDCCHSGSIMDLPFTYVCSGGEQASGTPHMK 240 RIREGNDVLGDVMMISGCADEQTSADVKNTATFGTGSTGAGGAATQCITCMLMNNQSLSYGKLLIETRDMLKRKGFKQVP 320 QLSASKAIDLDQTFSLTEMFSVDRSVQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.710 43 GLQPPPR|RV 0.125 . Tbg972.6.710 44 LQPPPRR|VD 0.096 . Tbg972.6.710 52 DVDAAFR|DA 0.108 . Tbg972.6.710 71 ATPLPGR|TV 0.100 . Tbg972.6.710 74 LPGRTVR|AL 0.424 . Tbg972.6.710 97 GCCNDVK|QM 0.060 . Tbg972.6.710 105 MLATLQK|KG 0.061 . Tbg972.6.710 106 LATLQKK|GL 0.104 . Tbg972.6.710 125 EDNFPGR|TD 0.097 . Tbg972.6.710 131 RTDQPTR|DN 0.098 . Tbg972.6.710 136 TRDNIVR|YM 0.110 . Tbg972.6.710 143 YMAWLVK|DA 0.083 . Tbg972.6.710 146 WLVKDAK|PG 0.065 . Tbg972.6.710 163 GHGTQCK|SR 0.100 . Tbg972.6.710 165 GTQCKSR|GD 0.130 . Tbg972.6.710 171 RGDSDEK|YD 0.059 . Tbg972.6.710 183 APVDFQK|SG 0.089 . Tbg972.6.710 194 VDDDIHK|LL 0.059 . Tbg972.6.710 199 HKLLFSR|LP 0.091 . Tbg972.6.710 203 FSRLPEK|VR 0.058 . Tbg972.6.710 205 RLPEKVR|LT 0.082 . Tbg972.6.710 240 SGTPHMK|RI 0.073 . Tbg972.6.710 241 GTPHMKR|IR 0.162 . Tbg972.6.710 243 PHMKRIR|EG 0.106 . Tbg972.6.710 268 QTSADVK|NT 0.074 . Tbg972.6.710 302 QSLSYGK|LL 0.066 . Tbg972.6.710 308 KLLIETR|DM 0.077 . Tbg972.6.710 312 ETRDMLK|RK 0.059 . Tbg972.6.710 313 TRDMLKR|KG 0.248 . Tbg972.6.710 314 RDMLKRK|GF 0.130 . Tbg972.6.710 317 LKRKGFK|QV 0.079 . Tbg972.6.710 326 PQLSASK|AI 0.059 . Tbg972.6.710 344 EMFSVDR|SV 0.151 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.710 ATGTGCTCCTTAATTACACAACTCTGTGATGCGGGCCAGTTAGCTGATTATGTGGGGCTC GGCTGGTTAAACGCAGTGAGCTCCCAGCCGTACCTTGTACAAGCTCTGGGACTTCAACCA CCTCCCCGGAGGGTTGACGTAGATGCCGCTTTCAGAGACGCAGAAGGCCTTCATGGCCAC CAGCCATGGGTCGCGACACCTCTTCCTGGCCGAACAGTTCGAGCTTTATTTATTGGAATT AATTACTATGGAACTTCCGCAGCGCTCTCCGGTTGCTGCAATGATGTCAAGCAAATGCTC GCCACACTGCAGAAAAAGGGGCTCCCAATCAACGAAGCCGTCATACTCGTCGACGAGGAC AATTTCCCCGGGAGGACCGACCAGCCAACCCGCGACAATATCGTACGTTACATGGCGTGG CTCGTGAAGGATGCAAAACCAGGTGATGTCCTTTTCTTCCATTACTCTGGTCATGGTACA CAATGCAAATCCAGAGGCGACAGTGACGAGAAGTACGATCAATGCATTGCCCCTGTGGAC TTCCAGAAAAGTGGATGCATTGTTGATGATGATATACACAAACTTCTCTTCTCTAGGCTT CCTGAAAAGGTACGACTCACAGCTGTGTTCGATTGTTGCCACTCAGGTTCTATTATGGAT CTTCCTTTTACCTATGTCTGCAGTGGAGGTGAGCAAGCATCGGGTACGCCACACATGAAG CGAATTCGTGAGGGAAATGATGTTCTGGGGGATGTGATGATGATTTCTGGTTGTGCTGAT GAGCAAACATCTGCTGATGTTAAGAATACTGCCACATTTGGTACGGGTTCTACAGGCGCT GGTGGTGCGGCCACGCAGTGTATCACGTGCATGCTTATGAACAACCAGTCGTTGTCGTAT GGTAAACTTCTAATCGAAACTCGCGACATGTTGAAGAGGAAAGGATTCAAACAAGTGCCA CAGCTCAGTGCTTCAAAAGCTATAGACCTTGATCAGACCTTCTCACTAACGGAAATGTTT TCTGTTGACAGATCTGTCCAATAG
  • Download Fasta

  • Fasta :-

    MCSLITQLCDAGQLADYVGLGWLNAVSSQPYLVQALGLQPPPRRVDVDAAFRDAEGLHGH QPWVATPLPGRTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKKGLPINEAVILVDED NFPGRTDQPTRDNIVRYMAWLVKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVD FQKSGCIVDDDIHKLLFSRLPEKVRLTAVFDCCHSGSIMDLPFTYVCSGGEQASGTPHMK RIREGNDVLGDVMMISGCADEQTSADVKNTATFGTGSTGAGGAATQCITCMLMNNQSLSY GKLLIETRDMLKRKGFKQVPQLSASKAIDLDQTFSLTEMFSVDRSVQ

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.6.710164 STQCKSRGDS0.995unspTbg972.6.710168 SSRGDSDEKY0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India