Tbg972.6.740 | cysteine peptidase, Clan CA, family C1, Cathepsin L-like, (fragment)

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.740OTHER0.9997140.0002330.000053
No Results

  • Fasta :-

    >Tbg972.6.740 MYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGAS YFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEGQWQVA GNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQC QMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGILTSCTSEQLD HGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVVGGPTPPP PPPPPPSATFTQDFCEGKGCTKGCSHATFPTGECVQTTGVGSVIATCGASNLTQIIYPLS RSCSGLSVPITVPLDKCIPILIGSVEYHCSTNPPTKAARLVPHQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/277 Sequence name : 277 Sequence length : 404 VALUES OF COMPUTED PARAMETERS Coef20 : 3.619 CoefTot : -0.790 ChDiff : -12 ZoneTo : 7 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.565 0.321 0.536 MesoH : 0.345 0.549 -0.009 0.285 MuHd_075 : 20.625 14.271 5.435 3.039 MuHd_095 : 30.042 16.663 8.128 5.628 MuHd_100 : 29.967 14.686 8.514 5.919 MuHd_105 : 28.912 12.311 8.601 5.894 Hmax_075 : 2.683 9.917 -1.222 3.103 Hmax_095 : -0.700 4.725 -1.490 1.925 Hmax_100 : 4.000 7.700 -1.010 3.700 Hmax_105 : 7.583 4.500 0.407 4.013 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9510 0.0490 DFMC : 0.9607 0.0393
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 404 Tbg972.6.740 MYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVNVTTGRA 80 PAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGG 160 NVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGILTSCTSEQLD 240 HGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVVGGPTPPPPPPPPPSATFTQDFCEGKGC 320 TKGCSHATFPTGECVQTTGVGSVIATCGASNLTQIIYPLSRSCSGLSVPITVPLDKCIPILIGSVEYHCSTNPPTKAARL 400 VPHQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.740 4 ---MYGK|VY 0.060 . Tbg972.6.740 7 MYGKVYK|DA 0.094 . Tbg972.6.740 10 KVYKDAK|EE 0.059 . Tbg972.6.740 15 AKEEAFR|FR 0.103 . Tbg972.6.740 17 EEAFRFR|AF 0.134 . Tbg972.6.740 27 ENMEQAK|IQ 0.071 . Tbg972.6.740 48 PFSDMTR|EE 0.085 . Tbg972.6.740 52 MTREEFR|AR 0.093 . Tbg972.6.740 54 REEFRAR|YR 0.088 . Tbg972.6.740 56 EFRARYR|NG 0.076 . Tbg972.6.740 67 YFAAAQK|RL 0.062 . Tbg972.6.740 68 FAAAQKR|LR 0.176 . Tbg972.6.740 70 AAQKRLR|KT 0.087 . Tbg972.6.740 71 AQKRLRK|TV 0.239 . Tbg972.6.740 79 VNVTTGR|AP 0.082 . Tbg972.6.740 87 PAAVDWR|EK 0.147 . Tbg972.6.740 89 AVDWREK|GA 0.065 . Tbg972.6.740 96 GAVTPMK|DQ 0.112 . Tbg972.6.740 260 PPYWIIK|NS 0.065 . Tbg972.6.740 274 GEDGYIR|IE 0.068 . Tbg972.6.740 277 GYIRIEK|GT 0.196 . Tbg972.6.740 318 QDFCEGK|GC 0.072 . Tbg972.6.740 322 EGKGCTK|GC 0.065 . Tbg972.6.740 361 IIYPLSR|SC 0.105 . Tbg972.6.740 376 ITVPLDK|CI 0.064 . Tbg972.6.740 396 STNPPTK|AA 0.098 . Tbg972.6.740 399 PPTKAAR|LV 0.140 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.740 ATGTACGGCAAGGTGTACAAGGATGCTAAGGAGGAAGCATTCCGCTTCCGTGCCTTTGAG GAGAATATGGAGCAGGCGAAGATTCAAGCTGCGGCGAACCCATACGCAACGTTTGGTGTG ACACCCTTCTCGGATATGACACGTGAAGAGTTCAGGGCACGCTACCGTAACGGCGCGTCC TACTTTGCAGCTGCGCAGAAGCGGCTACGCAAGACGGTGAACGTAACCACTGGCCGTGCT CCTGCAGCTGTGGATTGGCGTGAGAAGGGAGCAGTGACCCCAATGAAGGATCAGGGTCAG TGCGGCTCGTGCTGGGCCTTTTATAGTATCGGCAACATCGAAGGGCAGTGGCAGGTGGCA GGAAATCCTCTCGTATCCCTCTCGGAGCAGATGCTAGTGTCATGTGATACCATTGATTTC GGCTGTGGTGGTGGGCTGATGGACAATGCCTTCAACTGGATAGTAAATTCAAACGGTGGA AACGTATTCACGGAGGCGAGCTATCCCTATGTTTCTGGGAATGGTGAGCAGCCACAGTGC CAGATGAATGGTCACGAGATCGGTGCTGCGATAACAGACCATGTTGACTTACCGCAGGAT GAGGACGCTATCGCCGCGTATTTGGCAGAAAACGGTCCCCTTGCTATTGCCGTTGACGCC ACAAGTTTTATGGACTATAACGGTGGGATTCTGACTTCATGCACCTCCGAGCAATTGGAT CATGGTGTGCTCCTCGTTGGTTACAATGATAATAGCAATCCACCCTACTGGATCATCAAA AACTCGTGGAGCAACATGTGGGGCGAGGACGGCTACATCCGCATCGAGAAGGGCACAAAC CAATGTCTCATGAATCAGGCCGTATCCTCCGCAGTTGTTGGAGGCCCCACTCCACCACCA CCACCACCGCCGCCGCCTTCAGCAACTTTTACACAGGACTTCTGCGAGGGCAAGGGTTGT ACCAAAGGCTGCTCACATGCCACCTTCCCCACTGGCGAGTGCGTCCAGACTACCGGCGTC GGCTCAGTGATCGCCACGTGTGGCGCAAGCAACCTTACACAAATAATCTACCCACTAAGC AGGAGCTGCAGCGGCCTCTCTGTGCCGATTACTGTGCCACTGGATAAGTGCATACCCATT TTGATTGGGTCCGTTGAGTATCATTGCTCCACCAACCCACCCACTAAGGCGGCCAGGCTG GTCCCACACCAGTGA
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  • Fasta :-

    MYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGAS YFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEGQWQVA GNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQC QMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGILTSCTSEQLD HGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVVGGPTPPP PPPPPPSATFTQDFCEGKGCTKGCSHATFPTGECVQTTGVGSVIATCGASNLTQIIYPLS RSCSGLSVPITVPLDKCIPILIGSVEYHCSTNPPTKAARLVPHQ

  • title: active site
  • coordinates: Q98,C104,H241,N261
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India