Tbg972.6.790 | proteasome regulatory ATPase subunit 3, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.790OTHER0.9926540.0021830.005162
No Results

  • Fasta :-

    >Tbg972.6.790 MTSLLAQTTNAAVAGGTPAATLSLYEEHERLVRSIQNLELKTMICKTETHHLQKEESAAK QEVKRIQAVPLVLGTFVEAVEAGRGIVGGSSSSNYYVRILSTLDKEKLKPGASVGLHKGS NSCVQILPNEIDSAVHVLRKEDRPNVTYSDVGGLDMQKQEIREAVELPLTHASLYDQIGI DPPRGVLLYGPPGTGKTMLVKAVAHHTNAAFISVVGSEFVQKYLGEGPRKVRDVFRLARE NAPAIIFIDEVDSIATKRFDAQTGADREVQRVLIELLAQMDGFDQTTNVKVIMATNRWDT LDPAILRPGRLDRKIEFPYPDRRQKRLVFQVCTSRMNLSPEVDLEEFVTRPERLTGADIQ SICHEAGMLAVRKNRYVVLPKDIESAYRTVTRKTGDEQYDFYS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/242 Sequence name : 242 Sequence length : 403 VALUES OF COMPUTED PARAMETERS Coef20 : 4.185 CoefTot : 0.359 ChDiff : -1 ZoneTo : 25 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.094 1.406 0.043 0.546 MesoH : -0.608 0.226 -0.394 0.209 MuHd_075 : 6.934 8.672 1.918 2.412 MuHd_095 : 15.100 13.122 4.650 3.489 MuHd_100 : 14.250 11.794 4.605 3.469 MuHd_105 : 13.770 13.209 4.768 4.066 Hmax_075 : 12.367 13.100 1.589 4.610 Hmax_095 : 14.525 11.987 2.183 4.349 Hmax_100 : 14.400 12.300 2.222 4.490 Hmax_105 : 12.400 12.300 2.222 4.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9086 0.0914 DFMC : 0.8543 0.1457
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 403 Tbg972.6.790 MTSLLAQTTNAAVAGGTPAATLSLYEEHERLVRSIQNLELKTMICKTETHHLQKEESAAKQEVKRIQAVPLVLGTFVEAV 80 EAGRGIVGGSSSSNYYVRILSTLDKEKLKPGASVGLHKGSNSCVQILPNEIDSAVHVLRKEDRPNVTYSDVGGLDMQKQE 160 IREAVELPLTHASLYDQIGIDPPRGVLLYGPPGTGKTMLVKAVAHHTNAAFISVVGSEFVQKYLGEGPRKVRDVFRLARE 240 NAPAIIFIDEVDSIATKRFDAQTGADREVQRVLIELLAQMDGFDQTTNVKVIMATNRWDTLDPAILRPGRLDRKIEFPYP 320 DRRQKRLVFQVCTSRMNLSPEVDLEEFVTRPERLTGADIQSICHEAGMLAVRKNRYVVLPKDIESAYRTVTRKTGDEQYD 400 FYS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .....P.......................................................................... 400 ... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.790 30 LYEEHER|LV 0.101 . Tbg972.6.790 33 EHERLVR|SI 0.272 . Tbg972.6.790 41 IQNLELK|TM 0.064 . Tbg972.6.790 46 LKTMICK|TE 0.060 . Tbg972.6.790 54 ETHHLQK|EE 0.070 . Tbg972.6.790 60 KEESAAK|QE 0.059 . Tbg972.6.790 64 AAKQEVK|RI 0.070 . Tbg972.6.790 65 AKQEVKR|IQ 0.148 . Tbg972.6.790 84 EAVEAGR|GI 0.088 . Tbg972.6.790 98 SSNYYVR|IL 0.121 . Tbg972.6.790 105 ILSTLDK|EK 0.065 . Tbg972.6.790 107 STLDKEK|LK 0.058 . Tbg972.6.790 109 LDKEKLK|PG 0.065 . Tbg972.6.790 118 ASVGLHK|GS 0.067 . Tbg972.6.790 139 SAVHVLR|KE 0.089 . Tbg972.6.790 140 AVHVLRK|ED 0.084 . Tbg972.6.790 143 VLRKEDR|PN 0.089 . Tbg972.6.790 158 GGLDMQK|QE 0.056 . Tbg972.6.790 162 MQKQEIR|EA 0.097 . Tbg972.6.790 184 IGIDPPR|GV 0.114 . Tbg972.6.790 196 GPPGTGK|TM 0.058 . Tbg972.6.790 201 GKTMLVK|AV 0.079 . Tbg972.6.790 222 GSEFVQK|YL 0.106 . Tbg972.6.790 229 YLGEGPR|KV 0.135 . Tbg972.6.790 230 LGEGPRK|VR 0.069 . Tbg972.6.790 232 EGPRKVR|DV 0.384 . Tbg972.6.790 236 KVRDVFR|LA 0.124 . Tbg972.6.790 239 DVFRLAR|EN 0.189 . Tbg972.6.790 257 VDSIATK|RF 0.069 . Tbg972.6.790 258 DSIATKR|FD 0.204 . Tbg972.6.790 267 AQTGADR|EV 0.097 . Tbg972.6.790 271 ADREVQR|VL 0.113 . Tbg972.6.790 290 DQTTNVK|VI 0.058 . Tbg972.6.790 297 VIMATNR|WD 0.078 . Tbg972.6.790 307 LDPAILR|PG 0.067 . Tbg972.6.790 310 AILRPGR|LD 0.203 . Tbg972.6.790 313 RPGRLDR|KI 0.298 . Tbg972.6.790 314 PGRLDRK|IE 0.070 . Tbg972.6.790 322 EFPYPDR|RQ 0.065 . Tbg972.6.790 323 FPYPDRR|QK 0.119 . Tbg972.6.790 325 YPDRRQK|RL 0.118 . Tbg972.6.790 326 PDRRQKR|LV 0.800 *ProP* Tbg972.6.790 335 FQVCTSR|MN 0.071 . Tbg972.6.790 350 LEEFVTR|PE 0.084 . Tbg972.6.790 353 FVTRPER|LT 0.219 . Tbg972.6.790 372 AGMLAVR|KN 0.074 . Tbg972.6.790 373 GMLAVRK|NR 0.079 . Tbg972.6.790 375 LAVRKNR|YV 0.305 . Tbg972.6.790 381 RYVVLPK|DI 0.092 . Tbg972.6.790 388 DIESAYR|TV 0.109 . Tbg972.6.790 392 AYRTVTR|KT 0.152 . Tbg972.6.790 393 YRTVTRK|TG 0.102 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.790 ATGACTTCACTTTTAGCGCAAACAACAAATGCCGCAGTTGCAGGTGGTACCCCCGCGGCG ACGTTGAGTTTGTATGAAGAACATGAGCGGCTGGTGCGAAGCATACAAAACCTTGAACTC AAGACGATGATCTGCAAAACAGAAACGCACCATCTCCAAAAGGAGGAGAGCGCAGCCAAA CAGGAAGTGAAACGAATTCAAGCTGTCCCATTGGTACTTGGCACTTTTGTGGAGGCAGTA GAGGCGGGTCGTGGTATTGTAGGTGGTAGTTCGAGCAGCAACTACTATGTACGCATTTTA AGCACCTTGGACAAGGAAAAACTGAAACCTGGCGCAAGTGTGGGGTTGCATAAGGGCAGC AATTCTTGCGTCCAGATTCTTCCCAATGAAATAGACTCGGCGGTCCACGTTCTCCGTAAA GAAGATAGGCCAAACGTGACGTACAGTGATGTGGGTGGGCTGGACATGCAAAAACAAGAA ATTCGGGAAGCGGTTGAGTTACCTCTTACACATGCCTCACTATACGACCAGATTGGAATC GACCCTCCACGTGGCGTTTTGCTCTACGGCCCACCCGGCACCGGCAAAACAATGCTTGTG AAAGCTGTTGCACATCACACGAATGCGGCCTTCATTAGTGTGGTGGGTTCGGAATTTGTG CAGAAGTACCTTGGCGAGGGTCCACGTAAGGTGCGTGATGTGTTTCGACTTGCACGAGAA AATGCCCCGGCAATTATTTTTATAGACGAGGTTGACAGCATTGCAACCAAACGTTTTGAT GCGCAAACCGGTGCTGATCGTGAGGTTCAACGGGTGTTAATTGAGTTGTTGGCCCAAATG GATGGTTTTGATCAGACAACTAACGTGAAAGTTATCATGGCGACCAATCGCTGGGATACG CTGGACCCCGCAATCCTTCGGCCTGGACGTCTTGATCGCAAGATCGAATTCCCCTACCCC GATCGCCGTCAGAAACGGCTTGTCTTCCAGGTTTGTACATCTCGAATGAACCTTTCACCT GAGGTTGACTTGGAGGAATTTGTCACGCGACCGGAACGGCTTACAGGTGCAGATATCCAG TCCATTTGTCATGAGGCGGGTATGTTGGCGGTGCGGAAGAACAGATATGTTGTCCTACCA AAAGACATTGAAAGTGCCTATCGTACGGTCACTCGCAAGACGGGTGATGAACAATATGAT TTTTATTCGTAG
  • Download Fasta

  • Fasta :-

    MTSLLAQTTNAAVAGGTPAATLSLYEEHERLVRSIQNLELKTMICKTETHHLQKEESAAK QEVKRIQAVPLVLGTFVEAVEAGRGIVGGSSSSNYYVRILSTLDKEKLKPGASVGLHKGS NSCVQILPNEIDSAVHVLRKEDRPNVTYSDVGGLDMQKQEIREAVELPLTHASLYDQIGI DPPRGVLLYGPPGTGKTMLVKAVAHHTNAAFISVVGSEFVQKYLGEGPRKVRDVFRLARE NAPAIIFIDEVDSIATKRFDAQTGADREVQRVLIELLAQMDGFDQTTNVKVIMATNRWDT LDPAILRPGRLDRKIEFPYPDRRQKRLVFQVCTSRMNLSPEVDLEEFVTRPERLTGADIQ SICHEAGMLAVRKNRYVVLPKDIESAYRTVTRKTGDEQYDFYS

  • title: ATP binding site
  • coordinates: P191,P192,G193,T194,G195,K196,T197,M198,D249,N296
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India