Tbg972.6.80 | peptidase M20/M25/M40, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.80OTHER0.9996390.0003110.000049
No Results

  • Fasta :-

    >Tbg972.6.80 MQVDWGAVHKFITDEWDKTLVPTISAYIEVPNQSPHYDQEWATNGLMQKAMDIIIEWVKK QPIKGMKYELFEEKGLTPFLIVEIEGTEPCANTLMMYGHMDKQPPLLPWEEGLHPYKPVY RDGRLYGRGGADDGYAVFSALTAMAAVQKQGIPHGKVVVIIEASEESGSMHLPFYLEKCR DRIGNVDLLICLDSGAMSYDQLWLTTALRGVCGGMLTVETMKEGMHSGLSGGVVPDSFRI ARMLLERIEDTNTGEVKIIEANCDIPQHVVESMQSIRAIAYKEQFPLLSDVSTEVDDTVE LALRNSWKPCLTVVGDNLPDAATAGNVNRAKTVLRLSLRVPPIVDATKATLAMKRILEAD SPYNAKVTFTPDDAGDGCATPRLKPWLVEALNKGSEMAFGKGFASQGMGGSIPFIAMLLK KFPDAQFVVTGVLGPKSNAHGPNEFLHVPFAKGVTTCVARIVADHYHATPKIHKQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/806 Sequence name : 806 Sequence length : 475 VALUES OF COMPUTED PARAMETERS Coef20 : 3.410 CoefTot : -0.155 ChDiff : -11 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.712 1.276 0.166 0.604 MesoH : -0.037 0.424 -0.296 0.287 MuHd_075 : 29.662 18.566 8.299 5.774 MuHd_095 : 29.383 18.710 7.177 6.373 MuHd_100 : 27.911 12.182 4.317 5.055 MuHd_105 : 24.124 5.241 3.177 3.504 Hmax_075 : 1.225 7.000 -1.520 3.380 Hmax_095 : 1.662 10.500 -1.638 3.780 Hmax_100 : 5.800 5.500 -3.365 3.620 Hmax_105 : 2.000 -0.200 -4.468 2.625 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6893 0.3107 DFMC : 0.6952 0.3048
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 475 Tbg972.6.80 MQVDWGAVHKFITDEWDKTLVPTISAYIEVPNQSPHYDQEWATNGLMQKAMDIIIEWVKKQPIKGMKYELFEEKGLTPFL 80 IVEIEGTEPCANTLMMYGHMDKQPPLLPWEEGLHPYKPVYRDGRLYGRGGADDGYAVFSALTAMAAVQKQGIPHGKVVVI 160 IEASEESGSMHLPFYLEKCRDRIGNVDLLICLDSGAMSYDQLWLTTALRGVCGGMLTVETMKEGMHSGLSGGVVPDSFRI 240 ARMLLERIEDTNTGEVKIIEANCDIPQHVVESMQSIRAIAYKEQFPLLSDVSTEVDDTVELALRNSWKPCLTVVGDNLPD 320 AATAGNVNRAKTVLRLSLRVPPIVDATKATLAMKRILEADSPYNAKVTFTPDDAGDGCATPRLKPWLVEALNKGSEMAFG 400 KGFASQGMGGSIPFIAMLLKKFPDAQFVVTGVLGPKSNAHGPNEFLHVPFAKGVTTCVARIVADHYHATPKIHKQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.80 10 DWGAVHK|FI 0.083 . Tbg972.6.80 18 ITDEWDK|TL 0.056 . Tbg972.6.80 49 TNGLMQK|AM 0.079 . Tbg972.6.80 59 IIIEWVK|KQ 0.057 . Tbg972.6.80 60 IIEWVKK|QP 0.118 . Tbg972.6.80 64 VKKQPIK|GM 0.072 . Tbg972.6.80 67 QPIKGMK|YE 0.070 . Tbg972.6.80 74 YELFEEK|GL 0.066 . Tbg972.6.80 102 MYGHMDK|QP 0.054 . Tbg972.6.80 117 EGLHPYK|PV 0.071 . Tbg972.6.80 121 PYKPVYR|DG 0.097 . Tbg972.6.80 124 PVYRDGR|LY 0.292 . Tbg972.6.80 128 DGRLYGR|GG 0.081 . Tbg972.6.80 149 AMAAVQK|QG 0.071 . Tbg972.6.80 156 QGIPHGK|VV 0.098 . Tbg972.6.80 178 LPFYLEK|CR 0.067 . Tbg972.6.80 180 FYLEKCR|DR 0.083 . Tbg972.6.80 182 LEKCRDR|IG 0.076 . Tbg972.6.80 209 WLTTALR|GV 0.129 . Tbg972.6.80 222 LTVETMK|EG 0.062 . Tbg972.6.80 239 VVPDSFR|IA 0.086 . Tbg972.6.80 242 DSFRIAR|ML 0.244 . Tbg972.6.80 247 ARMLLER|IE 0.093 . Tbg972.6.80 257 TNTGEVK|II 0.074 . Tbg972.6.80 277 ESMQSIR|AI 0.117 . Tbg972.6.80 282 IRAIAYK|EQ 0.082 . Tbg972.6.80 304 TVELALR|NS 0.069 . Tbg972.6.80 308 ALRNSWK|PC 0.076 . Tbg972.6.80 329 TAGNVNR|AK 0.111 . Tbg972.6.80 331 GNVNRAK|TV 0.069 . Tbg972.6.80 335 RAKTVLR|LS 0.089 . Tbg972.6.80 339 VLRLSLR|VP 0.075 . Tbg972.6.80 348 PIVDATK|AT 0.062 . Tbg972.6.80 354 KATLAMK|RI 0.058 . Tbg972.6.80 355 ATLAMKR|IL 0.138 . Tbg972.6.80 366 DSPYNAK|VT 0.064 . Tbg972.6.80 382 DGCATPR|LK 0.080 . Tbg972.6.80 384 CATPRLK|PW 0.055 . Tbg972.6.80 393 LVEALNK|GS 0.073 . Tbg972.6.80 401 SEMAFGK|GF 0.081 . Tbg972.6.80 420 FIAMLLK|KF 0.063 . Tbg972.6.80 421 IAMLLKK|FP 0.139 . Tbg972.6.80 436 TGVLGPK|SN 0.081 . Tbg972.6.80 452 LHVPFAK|GV 0.108 . Tbg972.6.80 460 VTTCVAR|IV 0.126 . Tbg972.6.80 471 HYHATPK|IH 0.071 . Tbg972.6.80 474 ATPKIHK|Q- 0.061 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.80 ATGCAGGTTGATTGGGGTGCAGTTCATAAATTCATTACTGACGAATGGGACAAGACCCTC GTCCCCACCATTTCTGCATACATCGAGGTTCCGAACCAAAGCCCCCACTACGACCAGGAA TGGGCAACCAATGGGTTAATGCAAAAGGCTATGGATATCATTATTGAGTGGGTCAAAAAA CAGCCCATCAAGGGTATGAAATACGAGCTTTTCGAGGAGAAAGGATTAACGCCTTTCCTC ATTGTGGAGATTGAAGGAACTGAGCCATGTGCCAACACACTAATGATGTACGGCCATATG GACAAACAACCCCCTCTTCTTCCGTGGGAGGAGGGACTCCACCCATATAAGCCAGTGTAT CGGGATGGCAGATTATATGGTCGTGGAGGAGCTGACGATGGTTATGCCGTGTTTTCAGCT CTGACCGCAATGGCGGCTGTGCAAAAGCAAGGCATTCCACACGGGAAAGTCGTTGTTATC ATTGAGGCCAGTGAGGAATCTGGGAGTATGCACCTCCCTTTTTACCTCGAGAAATGCAGG GACCGCATCGGCAACGTCGATCTTCTTATTTGTTTGGACAGTGGGGCGATGAGCTACGAT CAACTTTGGCTGACGACAGCTCTACGAGGAGTATGTGGTGGCATGCTTACAGTGGAAACA ATGAAGGAAGGCATGCACAGTGGCCTATCCGGTGGCGTTGTTCCCGATTCCTTTCGTATT GCCCGTATGCTCCTCGAACGTATTGAAGATACAAATACCGGTGAAGTAAAAATTATCGAA GCAAACTGTGACATCCCTCAGCATGTTGTGGAGAGTATGCAGTCAATAAGGGCAATTGCA TACAAGGAGCAGTTTCCCCTTCTGTCCGACGTGTCTACTGAAGTTGATGACACTGTGGAG CTAGCCCTGAGGAATTCTTGGAAACCGTGCTTGACAGTGGTGGGTGATAACCTCCCTGAT GCGGCAACGGCTGGGAATGTCAATCGTGCCAAGACCGTGCTGCGGCTCTCCCTCCGTGTC CCCCCTATTGTGGACGCGACGAAGGCCACACTAGCGATGAAAAGAATACTCGAGGCTGAT TCCCCATATAACGCCAAAGTAACTTTCACTCCGGATGATGCAGGTGACGGCTGTGCGACA CCACGGCTAAAGCCATGGCTTGTGGAGGCGCTCAATAAGGGTAGTGAGATGGCTTTTGGT AAGGGGTTCGCATCACAGGGCATGGGTGGGTCCATTCCTTTTATTGCAATGTTGCTGAAA AAATTTCCGGATGCGCAATTTGTGGTCACCGGCGTTTTGGGACCGAAGAGCAACGCACAC GGGCCGAACGAGTTTCTACATGTGCCGTTTGCGAAAGGAGTAACTACGTGTGTTGCCCGA ATCGTTGCGGACCACTACCATGCAACGCCAAAGATACATAAGCAGTGA
  • Download Fasta

  • Fasta :-

    MQVDWGAVHKFITDEWDKTLVPTISAYIEVPNQSPHYDQEWATNGLMQKAMDIIIEWVKK QPIKGMKYELFEEKGLTPFLIVEIEGTEPCANTLMMYGHMDKQPPLLPWEEGLHPYKPVY RDGRLYGRGGADDGYAVFSALTAMAAVQKQGIPHGKVVVIIEASEESGSMHLPFYLEKCR DRIGNVDLLICLDSGAMSYDQLWLTTALRGVCGGMLTVETMKEGMHSGLSGGVVPDSFRI ARMLLERIEDTNTGEVKIIEANCDIPQHVVESMQSIRAIAYKEQFPLLSDVSTEVDDTVE LALRNSWKPCLTVVGDNLPDAATAGNVNRAKTVLRLSLRVPPIVDATKATLAMKRILEAD SPYNAKVTFTPDDAGDGCATPRLKPWLVEALNKGSEMAFGKGFASQGMGGSIPFIAMLLK KFPDAQFVVTGVLGPKSNAHGPNEFLHVPFAKGVTTCVARIVADHYHATPKIHKQ

  • title: metal binding site
  • coordinates: H99,D132,E165,E166,D193,H440
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.6.80337 SVLRLSLRVP0.995unspTbg972.6.80361 SLEADSPYNA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India