Tbg972.6.970 | proteasome beta-1 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.970OTHER0.9745510.0056150.019834
No Results

  • Fasta :-

    >Tbg972.6.970 MLRRPPGTLLHEPSYPLTLAHEPTANGPAQTAREYFQPDAAVLDPQLSEAVSLGTTIMAV SYKDGVVLAADSRTSTGAYVVNRASNKLTKLAKRIYCCRSGSAADTQALAEQTANYLESY ETDISQPVNVATAANIFKKLCYMNKWNITAGIIVAGYDPLNGGSVYSIPTGGACVKLDYA LGGSGSVFLYSFFDANYKPGMTKEECIRFCQRAVAHAYSRDGSSGGLIRTIALHQGEPED VTVPWTMTPYCMEKDPKYAELAVQNPPYSSSAKVCQNLMTSQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/928 Sequence name : 928 Sequence length : 282 VALUES OF COMPUTED PARAMETERS Coef20 : 3.568 CoefTot : -0.359 ChDiff : -1 ZoneTo : 11 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.053 1.088 0.127 0.538 MesoH : 0.094 0.453 -0.189 0.326 MuHd_075 : 19.621 5.963 3.399 4.908 MuHd_095 : 30.086 21.171 7.791 7.278 MuHd_100 : 19.264 16.128 5.788 5.771 MuHd_105 : 7.321 8.055 2.958 3.378 Hmax_075 : 10.150 6.767 0.497 3.547 Hmax_095 : 12.250 10.762 1.214 4.725 Hmax_100 : 10.600 10.400 1.139 4.760 Hmax_105 : 1.100 2.400 -1.980 2.430 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5931 0.4069 DFMC : 0.7319 0.2681
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 282 Tbg972.6.970 MLRRPPGTLLHEPSYPLTLAHEPTANGPAQTAREYFQPDAAVLDPQLSEAVSLGTTIMAVSYKDGVVLAADSRTSTGAYV 80 VNRASNKLTKLAKRIYCCRSGSAADTQALAEQTANYLESYETDISQPVNVATAANIFKKLCYMNKWNITAGIIVAGYDPL 160 NGGSVYSIPTGGACVKLDYALGGSGSVFLYSFFDANYKPGMTKEECIRFCQRAVAHAYSRDGSSGGLIRTIALHQGEPED 240 VTVPWTMTPYCMEKDPKYAELAVQNPPYSSSAKVCQNLMTSQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.970 3 ----MLR|RP 0.070 . Tbg972.6.970 4 ---MLRR|PP 0.156 . Tbg972.6.970 33 GPAQTAR|EY 0.138 . Tbg972.6.970 63 IMAVSYK|DG 0.072 . Tbg972.6.970 73 VLAADSR|TS 0.077 . Tbg972.6.970 83 GAYVVNR|AS 0.102 . Tbg972.6.970 87 VNRASNK|LT 0.065 . Tbg972.6.970 90 ASNKLTK|LA 0.073 . Tbg972.6.970 93 KLTKLAK|RI 0.069 . Tbg972.6.970 94 LTKLAKR|IY 0.123 . Tbg972.6.970 99 KRIYCCR|SG 0.167 . Tbg972.6.970 138 TAANIFK|KL 0.072 . Tbg972.6.970 139 AANIFKK|LC 0.103 . Tbg972.6.970 145 KLCYMNK|WN 0.072 . Tbg972.6.970 176 TGGACVK|LD 0.067 . Tbg972.6.970 198 FFDANYK|PG 0.060 . Tbg972.6.970 203 YKPGMTK|EE 0.059 . Tbg972.6.970 208 TKEECIR|FC 0.100 . Tbg972.6.970 212 CIRFCQR|AV 0.118 . Tbg972.6.970 220 VAHAYSR|DG 0.116 . Tbg972.6.970 229 SSGGLIR|TI 0.095 . Tbg972.6.970 254 TPYCMEK|DP 0.076 . Tbg972.6.970 257 CMEKDPK|YA 0.079 . Tbg972.6.970 273 PYSSSAK|VC 0.068 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.970 ATGTTGAGACGCCCCCCCGGTACACTCTTGCACGAACCCTCGTACCCGCTGACGCTGGCG CATGAACCGACAGCAAATGGACCAGCCCAAACTGCAAGGGAATATTTCCAACCAGATGCT GCAGTCCTCGACCCGCAACTGAGTGAGGCGGTTTCACTCGGAACAACCATCATGGCTGTT TCTTATAAGGATGGAGTCGTTCTGGCCGCTGATTCGCGAACTTCCACGGGAGCTTATGTG GTAAATCGCGCGAGCAACAAGCTGACGAAGTTGGCCAAAAGGATATACTGCTGCCGGAGT GGGTCTGCCGCCGACACTCAGGCACTCGCCGAGCAGACAGCAAATTATCTAGAGAGCTAT GAGACAGATATTTCGCAGCCGGTGAATGTTGCAACAGCAGCCAATATATTCAAAAAGCTG TGCTATATGAACAAGTGGAATATAACCGCTGGTATTATTGTGGCTGGTTATGATCCTTTG AACGGGGGATCTGTTTATAGCATTCCTACCGGTGGTGCGTGCGTGAAGCTGGACTATGCT CTGGGGGGAAGTGGTTCTGTTTTCCTGTATTCATTCTTCGACGCCAATTACAAACCGGGG ATGACGAAAGAAGAATGCATCCGTTTCTGTCAGCGCGCCGTCGCGCACGCGTACAGTCGA GACGGTTCCAGCGGTGGGTTAATCAGGACTATTGCTCTTCATCAAGGCGAACCGGAAGAT GTAACTGTGCCGTGGACGATGACTCCGTATTGCATGGAAAAGGACCCCAAATATGCTGAG TTGGCTGTGCAAAACCCTCCCTACAGTAGCTCTGCAAAGGTATGCCAGAACCTAATGACT TCTCAGTAG
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  • Fasta :-

    MLRRPPGTLLHEPSYPLTLAHEPTANGPAQTAREYFQPDAAVLDPQLSEAVSLGTTIMAV SYKDGVVLAADSRTSTGAYVVNRASNKLTKLAKRIYCCRSGSAADTQALAEQTANYLESY ETDISQPVNVATAANIFKKLCYMNKWNITAGIIVAGYDPLNGGSVYSIPTGGACVKLDYA LGGSGSVFLYSFFDANYKPGMTKEECIRFCQRAVAHAYSRDGSSGGLIRTIALHQGEPED VTVPWTMTPYCMEKDPKYAELAVQNPPYSSSAKVCQNLMTSQ

  • title: active site
  • coordinates: T55,D71,R73,K87,S184,D221,S224,G225
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.6.97061 SIMAVSYKDG0.998unspTbg972.6.97075 SDSRTSTGAY0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India