Tbg972.7.2790 | proteasome regulatory ATPase subunit 1

_IDPredictionOTHERSPmTPCS_Position
Tbg972.7.2790OTHER0.9999140.0000390.000046
No Results

  • Fasta :-

    >Tbg972.7.2790 MASEKGGCQTKNTVRIKGENEEEKEIIPLDQDDIALLKLYGSGPYHATVKELEEFVKTKA EAVNKLAGTRDNELGLAPPVQWDLNSDQEVMRSENSLHVARCTRIINKGQDDAKYVVAIR DTAKYVVKLGNRVARQDIEESMRVGVLVGYSSIHIEIPLPPRVDPSVSMMQVEEKPDVTY NDVGGAKEQIDRIREVVELPLTNPEKYTQLGIDPPKGVLLYGPPGTGKTLLAKAVANRTD ATFIRVIGSELVQRYIGEGARMIREIFQLARTKKAAIIFFDEVDAVGGARGGGDGDDEIQ RTMLEMVNQMDGFDSRGNIKVIMATNRPDTLDPALTRPGRMDRKLEVGLPDLEGRTKILR IHAKSLSCEKAIRFELIARLCPNATGADLRSVCTEAGMFAIRARRKTINEKDFLDAVNKV IKGHHKFSATAKYMVYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/292 Sequence name : 292 Sequence length : 437 VALUES OF COMPUTED PARAMETERS Coef20 : 3.365 CoefTot : -1.223 ChDiff : 1 ZoneTo : 18 KR : 4 DE : 1 CleavSite : 17 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.800 1.182 0.029 0.568 MesoH : -1.096 0.243 -0.455 0.126 MuHd_075 : 10.918 3.718 3.469 2.230 MuHd_095 : 18.641 4.534 3.563 3.017 MuHd_100 : 21.012 5.158 3.974 3.356 MuHd_105 : 22.889 5.455 4.851 3.677 Hmax_075 : -4.900 0.200 -1.771 0.330 Hmax_095 : 0.350 -0.525 -1.514 1.251 Hmax_100 : -0.600 -0.200 -1.997 0.810 Hmax_105 : 4.600 1.050 -0.701 1.657 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9735 0.0265 DFMC : 0.9641 0.0359
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 437 Tbg972.7.2790 MASEKGGCQTKNTVRIKGENEEEKEIIPLDQDDIALLKLYGSGPYHATVKELEEFVKTKAEAVNKLAGTRDNELGLAPPV 80 QWDLNSDQEVMRSENSLHVARCTRIINKGQDDAKYVVAIRDTAKYVVKLGNRVARQDIEESMRVGVLVGYSSIHIEIPLP 160 PRVDPSVSMMQVEEKPDVTYNDVGGAKEQIDRIREVVELPLTNPEKYTQLGIDPPKGVLLYGPPGTGKTLLAKAVANRTD 240 ATFIRVIGSELVQRYIGEGARMIREIFQLARTKKAAIIFFDEVDAVGGARGGGDGDDEIQRTMLEMVNQMDGFDSRGNIK 320 VIMATNRPDTLDPALTRPGRMDRKLEVGLPDLEGRTKILRIHAKSLSCEKAIRFELIARLCPNATGADLRSVCTEAGMFA 400 IRARRKTINEKDFLDAVNKVIKGHHKFSATAKYMVYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.7.2790 5 --MASEK|GG 0.069 . Tbg972.7.2790 11 KGGCQTK|NT 0.064 . Tbg972.7.2790 15 QTKNTVR|IK 0.101 . Tbg972.7.2790 17 KNTVRIK|GE 0.076 . Tbg972.7.2790 24 GENEEEK|EI 0.070 . Tbg972.7.2790 38 DDIALLK|LY 0.063 . Tbg972.7.2790 50 PYHATVK|EL 0.070 . Tbg972.7.2790 57 ELEEFVK|TK 0.063 . Tbg972.7.2790 59 EEFVKTK|AE 0.065 . Tbg972.7.2790 65 KAEAVNK|LA 0.074 . Tbg972.7.2790 70 NKLAGTR|DN 0.100 . Tbg972.7.2790 92 SDQEVMR|SE 0.115 . Tbg972.7.2790 101 NSLHVAR|CT 0.117 . Tbg972.7.2790 104 HVARCTR|II 0.378 . Tbg972.7.2790 108 CTRIINK|GQ 0.070 . Tbg972.7.2790 114 KGQDDAK|YV 0.107 . Tbg972.7.2790 120 KYVVAIR|DT 0.098 . Tbg972.7.2790 124 AIRDTAK|YV 0.093 . Tbg972.7.2790 128 TAKYVVK|LG 0.066 . Tbg972.7.2790 132 VVKLGNR|VA 0.077 . Tbg972.7.2790 135 LGNRVAR|QD 0.353 . Tbg972.7.2790 143 DIEESMR|VG 0.071 . Tbg972.7.2790 162 EIPLPPR|VD 0.069 . Tbg972.7.2790 175 MMQVEEK|PD 0.065 . Tbg972.7.2790 187 NDVGGAK|EQ 0.061 . Tbg972.7.2790 192 AKEQIDR|IR 0.084 . Tbg972.7.2790 194 EQIDRIR|EV 0.117 . Tbg972.7.2790 206 PLTNPEK|YT 0.069 . Tbg972.7.2790 216 LGIDPPK|GV 0.077 . Tbg972.7.2790 228 GPPGTGK|TL 0.061 . Tbg972.7.2790 233 GKTLLAK|AV 0.074 . Tbg972.7.2790 238 AKAVANR|TD 0.087 . Tbg972.7.2790 245 TDATFIR|VI 0.154 . Tbg972.7.2790 254 GSELVQR|YI 0.183 . Tbg972.7.2790 261 YIGEGAR|MI 0.098 . Tbg972.7.2790 264 EGARMIR|EI 0.291 . Tbg972.7.2790 271 EIFQLAR|TK 0.090 . Tbg972.7.2790 273 FQLARTK|KA 0.069 . Tbg972.7.2790 274 QLARTKK|AA 0.488 . Tbg972.7.2790 290 DAVGGAR|GG 0.119 . Tbg972.7.2790 301 GDDEIQR|TM 0.077 . Tbg972.7.2790 316 MDGFDSR|GN 0.123 . Tbg972.7.2790 320 DSRGNIK|VI 0.062 . Tbg972.7.2790 327 VIMATNR|PD 0.075 . Tbg972.7.2790 337 LDPALTR|PG 0.074 . Tbg972.7.2790 340 ALTRPGR|MD 0.267 . Tbg972.7.2790 343 RPGRMDR|KL 0.473 . Tbg972.7.2790 344 PGRMDRK|LE 0.066 . Tbg972.7.2790 355 LPDLEGR|TK 0.079 . Tbg972.7.2790 357 DLEGRTK|IL 0.063 . Tbg972.7.2790 360 GRTKILR|IH 0.093 . Tbg972.7.2790 364 ILRIHAK|SL 0.121 . Tbg972.7.2790 370 KSLSCEK|AI 0.062 . Tbg972.7.2790 373 SCEKAIR|FE 0.086 . Tbg972.7.2790 379 RFELIAR|LC 0.073 . Tbg972.7.2790 390 ATGADLR|SV 0.244 . Tbg972.7.2790 402 AGMFAIR|AR 0.086 . Tbg972.7.2790 404 MFAIRAR|RK 0.121 . Tbg972.7.2790 405 FAIRARR|KT 0.344 . Tbg972.7.2790 406 AIRARRK|TI 0.089 . Tbg972.7.2790 411 RKTINEK|DF 0.071 . Tbg972.7.2790 419 FLDAVNK|VI 0.059 . Tbg972.7.2790 422 AVNKVIK|GH 0.073 . Tbg972.7.2790 426 VIKGHHK|FS 0.076 . Tbg972.7.2790 432 KFSATAK|YM 0.078 . ____________________________^_________________

  • Fasta :-

    >Tbg972.7.2790 ATGGCAAGCGAGAAGGGAGGATGTCAAACCAAGAACACTGTGCGCATCAAGGGGGAAAAT GAAGAAGAAAAGGAGATTATTCCACTTGACCAAGATGACATTGCTCTATTGAAACTATAT GGCTCGGGACCATACCACGCCACGGTGAAGGAGTTGGAGGAGTTTGTGAAGACAAAGGCA GAGGCGGTTAACAAACTCGCTGGCACACGGGATAATGAACTTGGACTTGCACCACCCGTA CAGTGGGATCTAAACAGTGACCAGGAGGTGATGCGGTCTGAGAACTCCCTTCATGTTGCT CGTTGCACCCGTATCATAAACAAAGGTCAGGACGATGCGAAGTACGTTGTGGCCATTCGT GACACAGCCAAATACGTGGTGAAACTTGGCAACCGCGTGGCCCGTCAGGACATTGAGGAA TCCATGCGTGTGGGTGTGTTAGTTGGGTATTCCAGCATTCACATCGAAATACCCCTCCCA CCTCGTGTTGACCCGTCTGTATCGATGATGCAGGTAGAAGAAAAGCCAGACGTTACATAT AATGATGTGGGTGGAGCAAAGGAGCAGATCGACCGCATTCGGGAGGTCGTGGAATTACCC CTCACTAACCCAGAGAAATACACACAGCTTGGTATAGATCCACCGAAGGGTGTGTTGCTC TACGGTCCACCGGGGACGGGGAAGACGCTCTTAGCGAAGGCTGTCGCCAACCGTACGGAC GCGACTTTTATTCGTGTGATTGGTTCCGAGCTGGTTCAGCGTTATATTGGTGAGGGTGCC CGAATGATTCGTGAGATTTTTCAGCTTGCAAGGACCAAGAAGGCAGCCATCATTTTCTTT GATGAAGTGGATGCTGTTGGTGGTGCTCGAGGTGGTGGTGATGGTGACGACGAAATTCAG CGAACGATGCTTGAGATGGTGAACCAGATGGATGGCTTCGACTCACGTGGTAATATAAAG GTTATAATGGCAACGAACCGTCCTGATACGTTAGACCCCGCCCTCACACGCCCAGGTCGC ATGGACCGCAAGCTTGAGGTTGGTCTGCCGGATCTGGAGGGTCGAACAAAGATCCTTCGC ATCCACGCCAAGTCACTCTCGTGTGAGAAGGCGATCAGGTTTGAACTGATTGCGAGGTTG TGCCCGAACGCAACGGGTGCCGATTTGAGGTCGGTCTGTACGGAAGCAGGCATGTTTGCC ATCAGGGCGCGCCGCAAGACAATTAACGAGAAAGACTTCTTGGATGCCGTTAACAAAGTG ATTAAGGGCCATCATAAGTTCAGCGCAACAGCCAAATACATGGTGTACAACTAA
  • Download Fasta

  • Fasta :-

    MASEKGGCQTKNTVRIKGENEEEKEIIPLDQDDIALLKLYGSGPYHATVKELEEFVKTKA EAVNKLAGTRDNELGLAPPVQWDLNSDQEVMRSENSLHVARCTRIINKGQDDAKYVVAIR DTAKYVVKLGNRVARQDIEESMRVGVLVGYSSIHIEIPLPPRVDPSVSMMQVEEKPDVTY NDVGGAKEQIDRIREVVELPLTNPEKYTQLGIDPPKGVLLYGPPGTGKTLLAKAVANRTD ATFIRVIGSELVQRYIGEGARMIREIFQLARTKKAAIIFFDEVDAVGGARGGGDGDDEIQ RTMLEMVNQMDGFDSRGNIKVIMATNRPDTLDPALTRPGRMDRKLEVGLPDLEGRTKILR IHAKSLSCEKAIRFELIARLCPNATGADLRSVCTEAGMFAIRARRKTINEKDFLDAVNKV IKGHHKFSATAKYMVYN

  • title: ATP binding site
  • coordinates: P223,P224,G225,T226,G227,K228,T229,L230,D281,N326
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India