Tbg972.7.4990 | proteasome alpha 3 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.7.4990OTHER0.9998390.0001040.000057
No Results

  • Fasta :-

    >Tbg972.7.4990 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTIIGILTTGGVVLGAERGQQHGLFDTEN MEDRNISGEKVYKISNHLGCSVAGVTSDAYALINYARLSAARHFYSFQEPIAAEDLCRMV CDEKQLYTQYGGVRPFGVSFLFAGWDRHYGYQLYHTDASGNYSAWRAYAVGQNDQVAQSL LKRDWKPELTLEEGIVLCLRVLGKTMDAVKLTPERLEVAVLQRVQAPLTQKLLDPYGVNP KMVPSFKILTDEELKPHVDEANRQREAEEAEEAEKEKKNEKRLASP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/149 Sequence name : 149 Sequence length : 286 VALUES OF COMPUTED PARAMETERS Coef20 : 4.132 CoefTot : 0.202 ChDiff : -8 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.876 1.706 0.393 0.711 MesoH : -0.761 0.180 -0.364 0.158 MuHd_075 : 11.267 2.054 1.264 3.887 MuHd_095 : 8.737 0.078 1.793 1.159 MuHd_100 : 9.493 3.825 2.195 2.151 MuHd_105 : 14.714 6.309 3.367 4.146 Hmax_075 : -3.850 -4.800 -2.602 0.210 Hmax_095 : -2.000 -3.325 -2.322 0.020 Hmax_100 : 9.800 0.700 0.016 2.170 Hmax_105 : -2.450 -3.967 -2.377 1.132 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9621 0.0379 DFMC : 0.9203 0.0797
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 286 Tbg972.7.4990 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTIIGILTTGGVVLGAERGQQHGLFDTENMEDRNISGEKVYKISNHLGC 80 SVAGVTSDAYALINYARLSAARHFYSFQEPIAAEDLCRMVCDEKQLYTQYGGVRPFGVSFLFAGWDRHYGYQLYHTDASG 160 NYSAWRAYAVGQNDQVAQSLLKRDWKPELTLEEGIVLCLRVLGKTMDAVKLTPERLEVAVLQRVQAPLTQKLLDPYGVNP 240 KMVPSFKILTDEELKPHVDEANRQREAEEAEEAEKEKKNEKRLASP 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.7.4990 4 ---MSSR|YD 0.099 . Tbg972.7.4990 8 SSRYDSR|TT 0.099 . Tbg972.7.4990 17 TFSPEGR|LY 0.098 . Tbg972.7.4990 49 VVLGAER|GQ 0.078 . Tbg972.7.4990 64 TENMEDR|NI 0.126 . Tbg972.7.4990 70 RNISGEK|VY 0.060 . Tbg972.7.4990 73 SGEKVYK|IS 0.068 . Tbg972.7.4990 97 ALINYAR|LS 0.082 . Tbg972.7.4990 102 ARLSAAR|HF 0.089 . Tbg972.7.4990 118 AAEDLCR|MV 0.125 . Tbg972.7.4990 124 RMVCDEK|QL 0.067 . Tbg972.7.4990 134 TQYGGVR|PF 0.099 . Tbg972.7.4990 147 LFAGWDR|HY 0.124 . Tbg972.7.4990 166 GNYSAWR|AY 0.118 . Tbg972.7.4990 182 VAQSLLK|RD 0.058 . Tbg972.7.4990 183 AQSLLKR|DW 0.365 . Tbg972.7.4990 186 LLKRDWK|PE 0.118 . Tbg972.7.4990 200 GIVLCLR|VL 0.090 . Tbg972.7.4990 204 CLRVLGK|TM 0.071 . Tbg972.7.4990 210 KTMDAVK|LT 0.059 . Tbg972.7.4990 215 VKLTPER|LE 0.072 . Tbg972.7.4990 223 EVAVLQR|VQ 0.070 . Tbg972.7.4990 231 QAPLTQK|LL 0.064 . Tbg972.7.4990 241 PYGVNPK|MV 0.066 . Tbg972.7.4990 247 KMVPSFK|IL 0.074 . Tbg972.7.4990 255 LTDEELK|PH 0.053 . Tbg972.7.4990 263 HVDEANR|QR 0.087 . Tbg972.7.4990 265 DEANRQR|EA 0.161 . Tbg972.7.4990 275 EAEEAEK|EK 0.054 . Tbg972.7.4990 277 EEAEKEK|KN 0.075 . Tbg972.7.4990 278 EAEKEKK|NE 0.072 . Tbg972.7.4990 281 KEKKNEK|RL 0.057 . Tbg972.7.4990 282 EKKNEKR|LA 0.320 . ____________________________^_________________

  • Fasta :-

    >Tbg972.7.4990 ATGTCCTCGCGTTACGACTCCCGCACCACCACCTTCTCGCCTGAGGGACGTCTTTATCAA GTGGAATATGCGGAAGAGGCAATATCGCAGGCGGGCACTATCATCGGAATTCTCACTACT GGTGGCGTCGTGCTTGGCGCTGAGCGGGGGCAGCAACATGGGTTGTTCGATACAGAGAAC ATGGAGGATAGAAATATAAGTGGAGAAAAAGTGTATAAGATTTCAAATCATCTCGGCTGC AGCGTCGCTGGCGTAACTTCTGATGCCTACGCACTAATCAACTACGCTCGACTGAGTGCA GCCCGCCACTTTTACAGCTTTCAGGAGCCGATAGCCGCGGAAGACCTTTGCCGCATGGTG TGTGACGAGAAACAGCTGTACACCCAGTATGGTGGTGTGCGTCCCTTCGGTGTGTCATTT CTCTTTGCAGGGTGGGATCGCCACTATGGCTACCAACTTTACCACACAGATGCAAGTGGT AACTATAGCGCATGGCGGGCGTATGCCGTTGGACAAAATGACCAGGTTGCACAGTCACTT CTCAAGCGTGACTGGAAACCGGAACTTACACTGGAGGAGGGCATTGTGCTTTGCCTACGG GTCCTCGGTAAGACGATGGACGCTGTGAAGCTTACGCCAGAGCGCTTGGAGGTGGCGGTG CTCCAACGCGTCCAGGCACCACTGACCCAAAAATTACTGGACCCGTACGGTGTAAACCCA AAGATGGTTCCGAGCTTTAAAATCTTGACTGATGAAGAGCTGAAACCACATGTTGATGAA GCAAACAGACAACGTGAGGCTGAGGAGGCGGAAGAAGCGGAAAAGGAGAAAAAGAACGAG AAGCGCTTGGCCTCGCCGTAA
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  • Fasta :-

    MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTIIGILTTGGVVLGAERGQQHGLFDTEN MEDRNISGEKVYKISNHLGCSVAGVTSDAYALINYARLSAARHFYSFQEPIAAEDLCRMV CDEKQLYTQYGGVRPFGVSFLFAGWDRHYGYQLYHTDASGNYSAWRAYAVGQNDQVAQSL LKRDWKPELTLEEGIVLCLRVLGKTMDAVKLTPERLEVAVLQRVQAPLTQKLLDPYGVNP KMVPSFKILTDEELKPHVDEANRQREAEEAEEAEKEKKNEKRLASP

  • title: active site
  • coordinates: G32,E48,G50,K70,Q172
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.7.49907 SSRYDSRTTT0.995unspTbg972.7.499013 STTTFSPEGR0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India