Tbg972.7.5470 | proteasome beta 6 subunit

_IDPredictionOTHERSPmTPCS_Position
Tbg972.7.5470OTHER0.9988640.0004940.000641
No Results

  • Fasta :-

    >Tbg972.7.5470 MIEDFSEHHVGEANTLQHHGYPRKLGNSVLTLPLRQGAKGHPQHWSPYTDNGGTIAAIAG SNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQ YNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSYDPVGSTEPFRY GTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCF HIITADGVGTEMFELRKD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/152 Sequence name : 152 Sequence length : 258 VALUES OF COMPUTED PARAMETERS Coef20 : 2.545 CoefTot : 0.000 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.206 0.185 0.574 MesoH : -0.419 0.291 -0.293 0.206 MuHd_075 : 38.409 23.491 12.454 5.812 MuHd_095 : 24.477 16.355 5.491 4.236 MuHd_100 : 27.034 19.853 7.410 5.102 MuHd_105 : 23.535 17.065 6.793 4.445 Hmax_075 : 14.583 8.167 1.449 3.722 Hmax_095 : 7.087 6.737 -1.400 3.089 Hmax_100 : 4.700 8.100 -1.540 3.820 Hmax_105 : 0.600 6.800 -2.168 3.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9262 0.0738 DFMC : 0.9204 0.0796
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 258 Tbg972.7.5470 MIEDFSEHHVGEANTLQHHGYPRKLGNSVLTLPLRQGAKGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHT 80 RSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDE 160 KGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCF 240 HIITADGVGTEMFELRKD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.7.5470 23 QHHGYPR|KL 0.142 . Tbg972.7.5470 24 HHGYPRK|LG 0.082 . Tbg972.7.5470 35 VLTLPLR|QG 0.085 . Tbg972.7.5470 39 PLRQGAK|GH 0.062 . Tbg972.7.5470 71 VLGADTR|LN 0.082 . Tbg972.7.5470 81 DFCIHTR|SD 0.116 . Tbg972.7.5470 86 TRSDTSK|LF 0.081 . Tbg972.7.5470 89 DTSKLFK|LT 0.079 . Tbg972.7.5470 93 LFKLTDR|IF 0.078 . Tbg972.7.5470 105 SGMQADR|LQ 0.077 . Tbg972.7.5470 113 QLQQMLK|YR 0.061 . Tbg972.7.5470 115 QQMLKYR|IQ 0.097 . Tbg972.7.5470 126 QYNNGGK|VP 0.062 . Tbg972.7.5470 131 GKVPSTK|AI 0.083 . Tbg972.7.5470 135 STKAIAK|LT 0.081 . Tbg972.7.5470 144 STMLYQR|RF 0.074 . Tbg972.7.5470 145 TMLYQRR|FF 0.145 . Tbg972.7.5470 161 IVGIDEK|GA 0.071 . Tbg972.7.5470 179 GSTEPFR|YG 0.093 . Tbg972.7.5470 200 LDCLLTR|QH 0.081 . Tbg972.7.5470 221 EALGMLK|NA 0.059 . Tbg972.7.5470 230 FTGAAER|DI 0.116 . Tbg972.7.5470 256 TEMFELR|KD 0.095 . Tbg972.7.5470 257 EMFELRK|D- 0.083 . ____________________________^_________________

  • Fasta :-

    >Tbg972.7.5470 ATGATTGAAGACTTCAGTGAGCACCACGTAGGTGAAGCAAATACCTTGCAGCATCACGGT TACCCCAGAAAGTTAGGAAACTCTGTGTTAACACTTCCTCTACGCCAAGGGGCCAAGGGA CACCCGCAACACTGGTCTCCCTACACAGACAATGGTGGCACCATCGCTGCCATTGCAGGA AGCAACTACGTTGTGCTTGGCGCCGATACACGCTTGAACGGTGACTTCTGCATTCACACC CGCTCGGATACTTCCAAGTTGTTTAAACTCACTGACCGCATCTTCCTCGCGTCGTCGGGC ATGCAAGCGGACCGTCTTCAGTTGCAGCAGATGCTTAAGTATCGCATTCAATGGTATCAA TACAATAACGGTGGGAAAGTGCCGTCAACAAAGGCCATCGCAAAGCTTACGTCCACAATG CTCTATCAACGGCGTTTTTTCCCATACTACACATTCAATATGATCGTTGGCATTGACGAG AAGGGCGCAGGTGTGTGCTACAGTTACGACCCTGTTGGCTCGACGGAACCCTTTCGTTAT GGCACATGTGGTTCCGCTAGCAGCTTTGTGGAGCCACTATTGGACTGTTTGCTTACTCGA CAACACATGGTTACGCAGGCGCCGGCTGACCTCACGATGGAAGAGGCTCTGGGCATGTTG AAAAATGCCTTCACTGGTGCAGCTGAGAGGGACATATTCACTGGTGACACCGTGTGCTTC CACATCATTACTGCGGATGGAGTGGGTACAGAAATGTTTGAGCTCCGCAAAGACTAA
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  • Fasta :-

    MIEDFSEHHVGEANTLQHHGYPRKLGNSVLTLPLRQGAKGHPQHWSPYTDNGGTIAAIAG SNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQ YNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSYDPVGSTEPFRY GTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCF HIITADGVGTEMFELRKD

  • title: active site
  • coordinates: G53,D69,R71,K86,S185,D231,T234,G235
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India