Tbg972.7.7240 | peptidase t, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.7.7240OTHER0.9578330.0007750.041392
No Results

  • Fasta :-

    >Tbg972.7.7240 MPAETIEQRLVNRFMRYSAISSQSNASFAGKSLPTSPGQQELAELIAGELRDVGLEDVLC DNHATVTAIKRGTVKDCPTIGFIVHLDTVDVGLSPVVRAQKLHYDGGDVCLNKEKDIWLR VTEHPEIEAYVGQDILFGDGTSVLGADDKAAITVVMEMITGLQPNDEHGDIVVCCVPDEE IGLLGPKNLDLKARFDVDFAYTIDCCELGEVVYENFNAAAARITFTGVTAHPMSAKGVLV NPLLMAMDYIAQFDRNETPECTAGRDGYWWFSDIYANQNEAVLDVKIREFDAVRFEARKQ QLLSVAESIRLCYPTGGVELSISEQYRNIANFLGDDRSAVDLLFDALRSVGVQPKVTPMR GGTDGAVLSSRGVVTPNYFTGAHNFHSKFEFLPIPSFVKSYEVTRQLALLATKLPKLRKR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/534 Sequence name : 534 Sequence length : 420 VALUES OF COMPUTED PARAMETERS Coef20 : 4.410 CoefTot : -0.112 ChDiff : -17 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.300 0.029 0.544 MesoH : -0.576 0.476 -0.329 0.250 MuHd_075 : 34.630 24.492 8.955 7.146 MuHd_095 : 36.129 23.405 9.566 9.454 MuHd_100 : 28.102 18.376 6.804 8.132 MuHd_105 : 25.687 12.720 4.048 6.779 Hmax_075 : 20.533 18.200 2.921 5.752 Hmax_095 : 8.400 12.863 0.511 4.497 Hmax_100 : 2.900 7.300 -0.659 3.660 Hmax_105 : -5.950 4.300 -3.232 2.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1945 0.8055 DFMC : 0.4414 0.5586 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.0000 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 420 Tbg972.7.7240 MPAETIEQRLVNRFMRYSAISSQSNASFAGKSLPTSPGQQELAELIAGELRDVGLEDVLCDNHATVTAIKRGTVKDCPTI 80 GFIVHLDTVDVGLSPVVRAQKLHYDGGDVCLNKEKDIWLRVTEHPEIEAYVGQDILFGDGTSVLGADDKAAITVVMEMIT 160 GLQPNDEHGDIVVCCVPDEEIGLLGPKNLDLKARFDVDFAYTIDCCELGEVVYENFNAAAARITFTGVTAHPMSAKGVLV 240 NPLLMAMDYIAQFDRNETPECTAGRDGYWWFSDIYANQNEAVLDVKIREFDAVRFEARKQQLLSVAESIRLCYPTGGVEL 320 SISEQYRNIANFLGDDRSAVDLLFDALRSVGVQPKVTPMRGGTDGAVLSSRGVVTPNYFTGAHNFHSKFEFLPIPSFVKS 400 YEVTRQLALLATKLPKLRKR 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.7.7240 9 AETIEQR|LV 0.095 . Tbg972.7.7240 13 EQRLVNR|FM 0.098 . Tbg972.7.7240 16 LVNRFMR|YS 0.333 . Tbg972.7.7240 31 NASFAGK|SL 0.109 . Tbg972.7.7240 51 LIAGELR|DV 0.145 . Tbg972.7.7240 70 ATVTAIK|RG 0.056 . Tbg972.7.7240 71 TVTAIKR|GT 0.180 . Tbg972.7.7240 75 IKRGTVK|DC 0.084 . Tbg972.7.7240 98 GLSPVVR|AQ 0.102 . Tbg972.7.7240 101 PVVRAQK|LH 0.115 . Tbg972.7.7240 113 GDVCLNK|EK 0.066 . Tbg972.7.7240 115 VCLNKEK|DI 0.067 . Tbg972.7.7240 120 EKDIWLR|VT 0.087 . Tbg972.7.7240 149 VLGADDK|AA 0.079 . Tbg972.7.7240 187 IGLLGPK|NL 0.055 . Tbg972.7.7240 192 PKNLDLK|AR 0.066 . Tbg972.7.7240 194 NLDLKAR|FD 0.119 . Tbg972.7.7240 222 FNAAAAR|IT 0.154 . Tbg972.7.7240 236 AHPMSAK|GV 0.082 . Tbg972.7.7240 255 YIAQFDR|NE 0.085 . Tbg972.7.7240 265 PECTAGR|DG 0.103 . Tbg972.7.7240 286 EAVLDVK|IR 0.054 . Tbg972.7.7240 288 VLDVKIR|EF 0.121 . Tbg972.7.7240 294 REFDAVR|FE 0.078 . Tbg972.7.7240 298 AVRFEAR|KQ 0.076 . Tbg972.7.7240 299 VRFEARK|QQ 0.069 . Tbg972.7.7240 310 SVAESIR|LC 0.091 . Tbg972.7.7240 327 SISEQYR|NI 0.129 . Tbg972.7.7240 337 NFLGDDR|SA 0.107 . Tbg972.7.7240 348 LLFDALR|SV 0.211 . Tbg972.7.7240 355 SVGVQPK|VT 0.067 . Tbg972.7.7240 360 PKVTPMR|GG 0.107 . Tbg972.7.7240 371 GAVLSSR|GV 0.105 . Tbg972.7.7240 388 AHNFHSK|FE 0.080 . Tbg972.7.7240 399 PIPSFVK|SY 0.073 . Tbg972.7.7240 405 KSYEVTR|QL 0.078 . Tbg972.7.7240 413 LALLATK|LP 0.051 . Tbg972.7.7240 416 LATKLPK|LR 0.059 . Tbg972.7.7240 418 TKLPKLR|KR 0.082 . Tbg972.7.7240 419 KLPKLRK|R- 0.079 . Tbg972.7.7240 420 LPKLRKR|-- 0.235 . ____________________________^_________________

  • Fasta :-

    >Tbg972.7.7240 ATGCCAGCAGAGACCATTGAGCAGCGGCTTGTGAATCGCTTCATGCGATACTCTGCCATA AGCAGTCAAAGCAACGCCTCCTTTGCAGGGAAGTCCTTACCGACATCCCCTGGGCAGCAG GAACTCGCTGAGCTGATTGCTGGAGAACTGCGAGATGTGGGTTTGGAGGATGTATTGTGT GACAACCACGCCACAGTAACAGCGATTAAACGGGGCACTGTGAAGGATTGCCCAACTATC GGTTTCATTGTTCATCTCGACACAGTTGATGTTGGTCTCAGCCCGGTTGTACGGGCGCAG AAGCTGCATTACGACGGGGGTGACGTTTGCCTCAACAAGGAAAAGGATATTTGGTTACGG GTGACAGAGCACCCAGAAATTGAGGCCTACGTTGGACAGGATATTTTGTTTGGCGATGGT ACCAGCGTGCTTGGGGCGGATGACAAAGCAGCAATCACGGTGGTCATGGAAATGATCACA GGGTTGCAGCCGAACGATGAACATGGTGATATTGTTGTATGTTGTGTGCCTGATGAGGAG ATTGGCCTCTTGGGTCCGAAGAATCTCGATCTAAAGGCTCGTTTTGATGTGGACTTTGCG TATACGATCGATTGCTGTGAGTTGGGTGAAGTTGTTTATGAGAACTTTAATGCGGCGGCA GCGCGTATCACTTTCACTGGCGTCACGGCTCACCCCATGTCTGCGAAGGGTGTGCTGGTG AATCCGCTACTCATGGCGATGGATTACATTGCGCAGTTTGACCGCAACGAAACACCCGAG TGCACGGCGGGGCGTGATGGCTATTGGTGGTTTTCTGATATATACGCCAACCAGAATGAG GCGGTATTGGATGTCAAAATACGCGAGTTTGATGCAGTCAGGTTTGAAGCACGCAAACAA CAGCTTCTTTCGGTTGCGGAGTCCATTCGGCTGTGCTACCCAACTGGTGGTGTGGAGCTA AGCATTTCAGAGCAGTACCGCAACATTGCCAACTTTTTGGGTGACGATCGCTCTGCAGTG GACCTTCTGTTCGATGCGTTGCGCAGCGTTGGTGTGCAGCCAAAAGTAACACCGATGCGT GGCGGGACCGATGGAGCTGTTTTGTCTTCCCGGGGTGTTGTGACCCCAAATTACTTTACA GGGGCACACAACTTCCACTCGAAGTTTGAGTTTCTTCCCATTCCGTCGTTTGTCAAGTCA TATGAGGTCACGCGGCAGTTGGCACTATTGGCCACGAAGCTACCCAAGCTGCGGAAACGG TGA
  • Download Fasta

  • Fasta :-

    MPAETIEQRLVNRFMRYSAISSQSNASFAGKSLPTSPGQQELAELIAGELRDVGLEDVLC DNHATVTAIKRGTVKDCPTIGFIVHLDTVDVGLSPVVRAQKLHYDGGDVCLNKEKDIWLR VTEHPEIEAYVGQDILFGDGTSVLGADDKAAITVVMEMITGLQPNDEHGDIVVCCVPDEE IGLLGPKNLDLKARFDVDFAYTIDCCELGEVVYENFNAAAARITFTGVTAHPMSAKGVLV NPLLMAMDYIAQFDRNETPECTAGRDGYWWFSDIYANQNEAVLDVKIREFDAVRFEARKQ QLLSVAESIRLCYPTGGVELSISEQYRNIANFLGDDRSAVDLLFDALRSVGVQPKVTPMR GGTDGAVLSSRGVVTPNYFTGAHNFHSKFEFLPIPSFVKSYEVTRQLALLATKLPKLRKR

  • title: metal binding site
  • coordinates: H85,D147,E179,E180,D204,H386
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.7.724036 SSLPTSPGQQ0.996unspTbg972.7.7240400 SSFVKSYEVT0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India