Tbg972.8.1550 | metallo- peptidase, Clan MH, Family M18

_IDPredictionOTHERSPmTPCS_Position
Tbg972.8.1550OTHER0.9983800.0007230.000897
No Results

  • Fasta :-

    >Tbg972.8.1550 MNCREWLAKLVSYDTTSRNSNLELIYCIRSYLTALGVPSTLVYNDEKTKANLWATLAGEG GITDGGIILSGHTDVVPVDGQKWESDPFTLTERDGKFYGRGTCDMKGFIAVCMSLVPELL QMKRRKPIHLAWTYDEEVGCIGGQVLTQFLREQGVKAYGCIVGEPTSNQVVVAHKGIAVY RARVQGKAAHSSYALTRRSCNAIDYAAKLIVKIREIAEDFRCNGTCDSFFDVPNTTISTN LVTGGNAENTVPAVCEFVFEMRYLTNTDLGLIEKQIKTYAEGELLPLMKTEFDCASIEIV KMVGAPPLKQADEEDPFLILLRRIARDNAVRKVAYATEAGHYQGIGIPVGVCGPGSILQA HGANEFVTLEQLEGCAKIIREVAQDGDIGRKPHL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/628 Sequence name : 628 Sequence length : 394 VALUES OF COMPUTED PARAMETERS Coef20 : 4.450 CoefTot : 0.001 ChDiff : -6 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.294 1.265 0.295 0.589 MesoH : -0.652 0.260 -0.371 0.204 MuHd_075 : 47.253 18.309 9.529 8.675 MuHd_095 : 9.469 13.942 6.233 1.330 MuHd_100 : 6.634 11.337 3.829 2.268 MuHd_105 : 19.298 12.867 6.005 4.048 Hmax_075 : 7.262 5.600 0.841 3.337 Hmax_095 : -1.500 6.300 0.466 0.831 Hmax_100 : 0.200 5.500 -0.631 2.480 Hmax_105 : 10.967 8.283 1.951 3.943 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3635 0.6365 DFMC : 0.5232 0.4768
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 394 Tbg972.8.1550 MNCREWLAKLVSYDTTSRNSNLELIYCIRSYLTALGVPSTLVYNDEKTKANLWATLAGEGGITDGGIILSGHTDVVPVDG 80 QKWESDPFTLTERDGKFYGRGTCDMKGFIAVCMSLVPELLQMKRRKPIHLAWTYDEEVGCIGGQVLTQFLREQGVKAYGC 160 IVGEPTSNQVVVAHKGIAVYRARVQGKAAHSSYALTRRSCNAIDYAAKLIVKIREIAEDFRCNGTCDSFFDVPNTTISTN 240 LVTGGNAENTVPAVCEFVFEMRYLTNTDLGLIEKQIKTYAEGELLPLMKTEFDCASIEIVKMVGAPPLKQADEEDPFLIL 320 LRRIARDNAVRKVAYATEAGHYQGIGIPVGVCGPGSILQAHGANEFVTLEQLEGCAKIIREVAQDGDIGRKPHL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.8.1550 4 ---MNCR|EW 0.094 . Tbg972.8.1550 9 CREWLAK|LV 0.089 . Tbg972.8.1550 18 SYDTTSR|NS 0.067 . Tbg972.8.1550 29 ELIYCIR|SY 0.114 . Tbg972.8.1550 47 LVYNDEK|TK 0.056 . Tbg972.8.1550 49 YNDEKTK|AN 0.062 . Tbg972.8.1550 82 VPVDGQK|WE 0.060 . Tbg972.8.1550 93 PFTLTER|DG 0.079 . Tbg972.8.1550 96 LTERDGK|FY 0.227 . Tbg972.8.1550 100 DGKFYGR|GT 0.107 . Tbg972.8.1550 106 RGTCDMK|GF 0.067 . Tbg972.8.1550 123 PELLQMK|RR 0.053 . Tbg972.8.1550 124 ELLQMKR|RK 0.115 . Tbg972.8.1550 125 LLQMKRR|KP 0.147 . Tbg972.8.1550 126 LQMKRRK|PI 0.103 . Tbg972.8.1550 151 VLTQFLR|EQ 0.077 . Tbg972.8.1550 156 LREQGVK|AY 0.077 . Tbg972.8.1550 175 QVVVAHK|GI 0.068 . Tbg972.8.1550 181 KGIAVYR|AR 0.103 . Tbg972.8.1550 183 IAVYRAR|VQ 0.124 . Tbg972.8.1550 187 RARVQGK|AA 0.098 . Tbg972.8.1550 197 SSYALTR|RS 0.107 . Tbg972.8.1550 198 SYALTRR|SC 0.246 . Tbg972.8.1550 208 AIDYAAK|LI 0.064 . Tbg972.8.1550 212 AAKLIVK|IR 0.062 . Tbg972.8.1550 214 KLIVKIR|EI 0.112 . Tbg972.8.1550 221 EIAEDFR|CN 0.103 . Tbg972.8.1550 262 EFVFEMR|YL 0.087 . Tbg972.8.1550 274 DLGLIEK|QI 0.062 . Tbg972.8.1550 277 LIEKQIK|TY 0.066 . Tbg972.8.1550 289 ELLPLMK|TE 0.061 . Tbg972.8.1550 301 ASIEIVK|MV 0.073 . Tbg972.8.1550 309 VGAPPLK|QA 0.071 . Tbg972.8.1550 322 PFLILLR|RI 0.068 . Tbg972.8.1550 323 FLILLRR|IA 0.123 . Tbg972.8.1550 326 LLRRIAR|DN 0.244 . Tbg972.8.1550 331 ARDNAVR|KV 0.109 . Tbg972.8.1550 332 RDNAVRK|VA 0.130 . Tbg972.8.1550 377 QLEGCAK|II 0.065 . Tbg972.8.1550 380 GCAKIIR|EV 0.129 . Tbg972.8.1550 390 QDGDIGR|KP 0.080 . Tbg972.8.1550 391 DGDIGRK|PH 0.064 . ____________________________^_________________

  • Fasta :-

    >Tbg972.8.1550 ATGAACTGCAGAGAGTGGTTGGCGAAACTTGTTTCGTATGACACTACCAGCCGAAATTCG AACCTCGAGCTCATTTACTGCATAAGAAGCTACCTTACGGCCCTTGGCGTACCGAGCACG TTAGTGTACAACGACGAGAAAACAAAAGCGAATCTATGGGCAACGTTGGCAGGTGAGGGT GGGATAACAGATGGTGGAATTATCCTCTCCGGTCATACAGACGTAGTCCCGGTAGATGGC CAGAAATGGGAGAGTGACCCCTTCACTCTAACAGAAAGAGATGGGAAGTTCTATGGACGA GGCACGTGTGATATGAAGGGTTTCATCGCGGTTTGCATGTCTCTTGTACCAGAGCTTCTT CAAATGAAGCGAAGGAAACCTATTCACCTTGCGTGGACGTACGATGAGGAAGTGGGGTGT ATTGGCGGCCAAGTATTAACCCAGTTTCTTCGTGAACAAGGGGTCAAGGCTTACGGATGC ATTGTTGGGGAGCCAACATCCAATCAGGTTGTTGTTGCACACAAGGGAATAGCAGTTTAC CGCGCTCGTGTGCAGGGGAAGGCGGCACACTCTTCGTATGCACTTACACGCCGGAGCTGC AATGCCATCGACTATGCCGCTAAACTCATTGTGAAGATACGCGAAATCGCCGAGGATTTC CGGTGCAACGGAACGTGTGATTCATTCTTTGACGTTCCCAACACGACGATATCAACCAAT CTTGTGACTGGTGGTAACGCTGAGAACACCGTACCCGCAGTTTGTGAATTCGTATTTGAG ATGCGTTACCTAACAAATACTGACTTGGGTTTGATTGAAAAACAAATCAAAACCTATGCA GAAGGTGAACTCCTCCCACTAATGAAGACGGAATTCGATTGCGCAAGCATTGAAATTGTG AAGATGGTCGGTGCACCACCTCTGAAGCAGGCGGATGAGGAAGATCCTTTTCTCATTTTG CTTCGTCGTATTGCAAGGGATAACGCGGTACGTAAGGTTGCGTATGCCACGGAAGCTGGA CATTACCAGGGTATTGGTATCCCTGTTGGTGTTTGCGGCCCTGGCTCGATTCTGCAGGCG CATGGAGCTAACGAATTCGTCACCCTCGAGCAGCTCGAAGGTTGTGCTAAAATTATTCGT GAGGTTGCGCAAGACGGCGATATTGGAAGAAAACCGCATCTGTAG
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  • Fasta :-

    MNCREWLAKLVSYDTTSRNSNLELIYCIRSYLTALGVPSTLVYNDEKTKANLWATLAGEG GITDGGIILSGHTDVVPVDGQKWESDPFTLTERDGKFYGRGTCDMKGFIAVCMSLVPELL QMKRRKPIHLAWTYDEEVGCIGGQVLTQFLREQGVKAYGCIVGEPTSNQVVVAHKGIAVY RARVQGKAAHSSYALTRRSCNAIDYAAKLIVKIREIAEDFRCNGTCDSFFDVPNTTISTN LVTGGNAENTVPAVCEFVFEMRYLTNTDLGLIEKQIKTYAEGELLPLMKTEFDCASIEIV KMVGAPPLKQADEEDPFLILLRRIARDNAVRKVAYATEAGHYQGIGIPVGVCGPGSILQA HGANEFVTLEQLEGCAKIIREVAQDGDIGRKPHL

  • title: metal binding site
  • coordinates: H72,D104,E136,E137,E164,H361
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.8.155020 STSRNSNLEL0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India