Tbg972.8.1860 | trypanothione synthetase, putative

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.8.1860OTHER0.9850880.0096180.005294
No Results

  • Fasta :-

    >Tbg972.8.1860 MVVREAVKRVPKQVVPLHGVCGYAPGCIPAYSNGTDTTFTYQGHYADNFFMGYKWQCVEF ARRWLLLRKGLALPQYDFAAHLIHMREVCDAETGEVVPCKFVSQGSPEPPAADALIVYPG TRENIFGHVGVITHVTDALVGVADQNRFFHDWDGRPYAAEFPLECVDGQYFIRDPLVECR GWVTFPERPNRVEGVPLVVSPHVRGPPKVHICKRINYVAGQLWSWCFNRECITFART
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/412 Sequence name : 412 Sequence length : 237 VALUES OF COMPUTED PARAMETERS Coef20 : 3.850 CoefTot : -2.386 ChDiff : 0 ZoneTo : 35 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.276 0.262 0.574 MesoH : -0.571 0.300 -0.366 0.234 MuHd_075 : 38.998 23.638 12.083 8.912 MuHd_095 : 44.393 31.239 11.672 10.294 MuHd_100 : 39.420 28.849 12.130 8.636 MuHd_105 : 37.572 28.988 11.845 7.997 Hmax_075 : 5.367 14.700 3.334 4.760 Hmax_095 : 12.600 20.475 2.018 5.967 Hmax_100 : 11.800 19.200 3.045 5.720 Hmax_105 : 17.733 14.500 6.198 3.120 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0523 0.9477 DFMC : 0.3533 0.6467 This protein is probably imported in mitochondria. f(Ser) = 0.0286 f(Arg) = 0.0571 CMi = 0.19048 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 237 Tbg972.8.1860 MVVREAVKRVPKQVVPLHGVCGYAPGCIPAYSNGTDTTFTYQGHYADNFFMGYKWQCVEFARRWLLLRKGLALPQYDFAA 80 HLIHMREVCDAETGEVVPCKFVSQGSPEPPAADALIVYPGTRENIFGHVGVITHVTDALVGVADQNRFFHDWDGRPYAAE 160 FPLECVDGQYFIRDPLVECRGWVTFPERPNRVEGVPLVVSPHVRGPPKVHICKRINYVAGQLWSWCFNRECITFART 240 ................................................................................ 80 ................................................................................ 160 ............................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.8.1860 4 ---MVVR|EA 0.095 . Tbg972.8.1860 8 VVREAVK|RV 0.064 . Tbg972.8.1860 9 VREAVKR|VP 0.185 . Tbg972.8.1860 12 AVKRVPK|QV 0.175 . Tbg972.8.1860 54 NFFMGYK|WQ 0.058 . Tbg972.8.1860 62 QCVEFAR|RW 0.077 . Tbg972.8.1860 63 CVEFARR|WL 0.083 . Tbg972.8.1860 68 RRWLLLR|KG 0.069 . Tbg972.8.1860 69 RWLLLRK|GL 0.070 . Tbg972.8.1860 86 AHLIHMR|EV 0.163 . Tbg972.8.1860 100 GEVVPCK|FV 0.141 . Tbg972.8.1860 122 IVYPGTR|EN 0.083 . Tbg972.8.1860 147 GVADQNR|FF 0.117 . Tbg972.8.1860 155 FHDWDGR|PY 0.087 . Tbg972.8.1860 173 DGQYFIR|DP 0.087 . Tbg972.8.1860 180 DPLVECR|GW 0.090 . Tbg972.8.1860 188 WVTFPER|PN 0.080 . Tbg972.8.1860 191 FPERPNR|VE 0.217 . Tbg972.8.1860 204 VVSPHVR|GP 0.109 . Tbg972.8.1860 208 HVRGPPK|VH 0.062 . Tbg972.8.1860 213 PKVHICK|RI 0.068 . Tbg972.8.1860 214 KVHICKR|IN 0.211 . Tbg972.8.1860 229 WSWCFNR|EC 0.097 . Tbg972.8.1860 236 ECITFAR|T- 0.093 . ____________________________^_________________

  • Fasta :-

    >Tbg972.8.1860 ATGGTGGTGCGGGAGGCGGTTAAGCGAGTCCCAAAGCAGGTTGTTCCACTGCATGGTGTG TGTGGTTATGCCCCGGGTTGTATACCCGCCTACAGCAATGGTACAGATACAACTTTTACT TACCAAGGTCACTACGCCGACAATTTCTTTATGGGATACAAGTGGCAGTGTGTAGAATTT GCCCGACGTTGGTTACTGTTACGCAAGGGCCTAGCCCTCCCGCAGTATGATTTCGCTGCA CATCTCATTCACATGCGCGAGGTGTGTGATGCAGAGACGGGGGAAGTTGTTCCCTGTAAA TTCGTATCGCAGGGTTCACCGGAACCACCAGCGGCGGATGCCCTAATCGTGTATCCGGGC ACAAGGGAAAATATTTTCGGCCATGTAGGTGTTATAACACACGTGACTGATGCACTTGTC GGCGTGGCCGATCAGAATCGATTCTTCCATGATTGGGATGGGCGGCCTTACGCAGCGGAG TTCCCGCTAGAGTGCGTGGATGGACAATATTTCATCAGAGATCCTCTCGTGGAGTGCCGC GGGTGGGTCACATTTCCCGAACGGCCAAACCGCGTCGAAGGAGTGCCGCTCGTTGTGTCG CCGCATGTGCGTGGTCCTCCAAAGGTTCATATCTGCAAGCGAATCAATTATGTAGCGGGA CAGTTGTGGTCGTGGTGTTTCAACAGAGAATGCATCACGTTTGCTCGAACCTAA
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  • Fasta :-

    MVVREAVKRVPKQVVPLHGVCGYAPGCIPAYSNGTDTTFTYQGHYADNFFMGYKWQCVEF ARRWLLLRKGLALPQYDFAAHLIHMREVCDAETGEVVPCKFVSQGSPEPPAADALIVYPG TRENIFGHVGVITHVTDALVGVADQNRFFHDWDGRPYAAEFPLECVDGQYFIRDPLVECR GWVTFPERPNRVEGVPLVVSPHVRGPPKVHICKRINYVAGQLWSWCFNRECITFART

    No Results
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IDSitePeptideScoreMethod
Tbg972.8.1860106 SVSQGSPEPP0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India