Tbg972.9.2390 | mitochondrial-processing peptidase subunit beta, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.9.2390SP0.2598470.4630460.277107CS pos: 24-25. CAA-AI. Pr: 0.5199
No Results

  • Fasta :-

    >Tbg972.9.2390 MFRPSFCRCLPVLNCTLSAPQCAAAIDRCTPVVYSSLPNGCRVATEYLPNCQFATVGVWI DAGSRFEDINNNGVAHFLEHMNFKGTAKYSKRAVEDLFEHRGAHFNAYTSRDRTAYYVKA FKYDVEKMIDVVSDLLQNGRYDPSDVELERPTILAEMREVEELVDEVLMDNLHQAAYDPA HCGLPLTILGPVENISSRINRDMIQEFVRVHYTGPRMSFISSGGIHPDEAHRLAEKFFGN LPAANNSPLLQSQYRGGYTVMWNEQMATANTAFAYPICGAIHDDSYALQLVHNVIGQVRE GQHDQFAHQRLNPRLPWEKLSNLVQLRPFYTPYKETSLLGYQLVTMRTAVADANGGVQRD ESQTVLLDHMLKLFNELSTKAVDAALLEEAKSEYKSSVMMMRDSTTNSAEDLGRQMIHLG RRVPLREVFERVDAVTPAVFRDTLAKYVQAVQPTVSYIGSASAVPRFDALTQVKHIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/56 Sequence name : 56 Sequence length : 477 VALUES OF COMPUTED PARAMETERS Coef20 : 4.566 CoefTot : -1.071 ChDiff : -9 ZoneTo : 60 KR : 4 DE : 2 CleavSite : 44 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.059 1.212 0.245 0.448 MesoH : -0.442 0.311 -0.197 0.182 MuHd_075 : 30.169 16.894 6.151 6.460 MuHd_095 : 38.234 29.334 12.733 8.321 MuHd_100 : 40.030 27.868 12.111 9.097 MuHd_105 : 32.135 25.510 11.870 8.249 Hmax_075 : 16.800 17.000 3.470 5.860 Hmax_095 : 14.263 15.925 5.487 4.576 Hmax_100 : 14.700 18.400 4.899 5.290 Hmax_105 : 13.767 22.983 5.529 4.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6989 0.3011 DFMC : 0.6510 0.3490
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 477 Tbg972.9.2390 MFRPSFCRCLPVLNCTLSAPQCAAAIDRCTPVVYSSLPNGCRVATEYLPNCQFATVGVWIDAGSRFEDINNNGVAHFLEH 80 MNFKGTAKYSKRAVEDLFEHRGAHFNAYTSRDRTAYYVKAFKYDVEKMIDVVSDLLQNGRYDPSDVELERPTILAEMREV 160 EELVDEVLMDNLHQAAYDPAHCGLPLTILGPVENISSRINRDMIQEFVRVHYTGPRMSFISSGGIHPDEAHRLAEKFFGN 240 LPAANNSPLLQSQYRGGYTVMWNEQMATANTAFAYPICGAIHDDSYALQLVHNVIGQVREGQHDQFAHQRLNPRLPWEKL 320 SNLVQLRPFYTPYKETSLLGYQLVTMRTAVADANGGVQRDESQTVLLDHMLKLFNELSTKAVDAALLEEAKSEYKSSVMM 400 MRDSTTNSAEDLGRQMIHLGRRVPLREVFERVDAVTPAVFRDTLAKYVQAVQPTVSYIGSASAVPRFDALTQVKHIL 480 ................................................................................ 80 ................................................................................ 160 ........................................P....................................... 240 ................................................................................ 320 ................................................................................ 400 ............................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.9.2390 3 ----MFR|PS 0.073 . Tbg972.9.2390 8 FRPSFCR|CL 0.091 . Tbg972.9.2390 28 CAAAIDR|CT 0.093 . Tbg972.9.2390 42 SLPNGCR|VA 0.097 . Tbg972.9.2390 65 WIDAGSR|FE 0.075 . Tbg972.9.2390 84 LEHMNFK|GT 0.073 . Tbg972.9.2390 88 NFKGTAK|YS 0.070 . Tbg972.9.2390 91 GTAKYSK|RA 0.066 . Tbg972.9.2390 92 TAKYSKR|AV 0.477 . Tbg972.9.2390 101 EDLFEHR|GA 0.098 . Tbg972.9.2390 111 FNAYTSR|DR 0.112 . Tbg972.9.2390 113 AYTSRDR|TA 0.074 . Tbg972.9.2390 119 RTAYYVK|AF 0.061 . Tbg972.9.2390 122 YYVKAFK|YD 0.059 . Tbg972.9.2390 127 FKYDVEK|MI 0.073 . Tbg972.9.2390 140 DLLQNGR|YD 0.070 . Tbg972.9.2390 150 SDVELER|PT 0.096 . Tbg972.9.2390 158 TILAEMR|EV 0.133 . Tbg972.9.2390 198 VENISSR|IN 0.103 . Tbg972.9.2390 201 ISSRINR|DM 0.636 *ProP* Tbg972.9.2390 209 MIQEFVR|VH 0.099 . Tbg972.9.2390 216 VHYTGPR|MS 0.084 . Tbg972.9.2390 232 HPDEAHR|LA 0.104 . Tbg972.9.2390 236 AHRLAEK|FF 0.068 . Tbg972.9.2390 255 LLQSQYR|GG 0.113 . Tbg972.9.2390 299 NVIGQVR|EG 0.078 . Tbg972.9.2390 310 DQFAHQR|LN 0.076 . Tbg972.9.2390 314 HQRLNPR|LP 0.087 . Tbg972.9.2390 319 PRLPWEK|LS 0.057 . Tbg972.9.2390 327 SNLVQLR|PF 0.081 . Tbg972.9.2390 334 PFYTPYK|ET 0.065 . Tbg972.9.2390 347 YQLVTMR|TA 0.082 . Tbg972.9.2390 359 ANGGVQR|DE 0.125 . Tbg972.9.2390 372 LLDHMLK|LF 0.055 . Tbg972.9.2390 380 FNELSTK|AV 0.090 . Tbg972.9.2390 391 ALLEEAK|SE 0.072 . Tbg972.9.2390 395 EAKSEYK|SS 0.070 . Tbg972.9.2390 402 SSVMMMR|DS 0.120 . Tbg972.9.2390 414 SAEDLGR|QM 0.091 . Tbg972.9.2390 421 QMIHLGR|RV 0.090 . Tbg972.9.2390 422 MIHLGRR|VP 0.092 . Tbg972.9.2390 426 GRRVPLR|EV 0.191 . Tbg972.9.2390 431 LREVFER|VD 0.089 . Tbg972.9.2390 441 VTPAVFR|DT 0.098 . Tbg972.9.2390 446 FRDTLAK|YV 0.130 . Tbg972.9.2390 466 SASAVPR|FD 0.118 . Tbg972.9.2390 474 DALTQVK|HI 0.062 . ____________________________^_________________

  • Fasta :-

    >Tbg972.9.2390 ATGTTTCGTCCATCCTTTTGCAGATGTCTTCCCGTGCTGAACTGCACGCTGAGCGCTCCT CAATGTGCTGCTGCGATTGACCGTTGCACACCGGTTGTTTACTCTTCACTTCCCAACGGA TGTCGTGTGGCCACCGAATATTTGCCAAATTGTCAGTTTGCCACCGTTGGGGTGTGGATT GACGCAGGCAGTCGCTTCGAGGATATTAACAACAACGGCGTTGCGCACTTTCTTGAACAC ATGAACTTCAAAGGCACTGCAAAGTACTCCAAGCGTGCCGTGGAAGATCTCTTCGAGCAT AGGGGGGCCCACTTCAATGCATACACTTCGCGTGACCGAACAGCATATTACGTGAAGGCG TTCAAATATGATGTGGAGAAAATGATTGATGTTGTCTCGGATTTACTGCAAAACGGCAGA TACGACCCAAGCGATGTCGAGTTGGAGAGGCCGACAATCCTAGCCGAGATGCGGGAGGTG GAGGAGCTGGTGGATGAAGTGCTCATGGATAACCTCCATCAGGCAGCTTACGACCCGGCA CACTGCGGGCTTCCGCTCACTATTCTAGGCCCTGTGGAAAACATTTCCTCCCGCATAAAC CGTGACATGATACAGGAGTTTGTTCGGGTGCACTACACCGGCCCGCGCATGTCTTTCATT AGTTCCGGTGGCATCCATCCAGATGAAGCACATAGGCTTGCCGAGAAGTTCTTTGGAAAC CTCCCTGCAGCGAACAACTCCCCACTGCTGCAGTCACAATACCGGGGTGGTTACACCGTG ATGTGGAACGAACAAATGGCCACGGCAAATACCGCTTTCGCGTATCCTATATGCGGGGCC ATACACGACGACAGCTACGCACTACAGTTAGTTCATAACGTTATTGGGCAAGTGCGTGAA GGACAACATGACCAATTTGCTCATCAGCGACTGAACCCGCGGCTCCCGTGGGAAAAGTTG TCAAACCTGGTCCAGCTGCGACCTTTCTATACTCCATACAAAGAGACTAGTCTCCTTGGG TATCAGTTAGTTACTATGCGCACGGCAGTCGCTGACGCCAACGGCGGTGTTCAGCGAGAT GAGAGCCAGACTGTGTTGCTGGATCACATGCTAAAGTTGTTTAATGAGCTGTCTACCAAA GCTGTTGACGCTGCACTCCTCGAGGAGGCAAAAAGTGAGTATAAGTCATCGGTTATGATG ATGCGAGACAGCACAACAAATAGCGCGGAGGACTTGGGTCGGCAGATGATTCACCTTGGT CGACGCGTGCCTCTGCGGGAGGTGTTCGAGCGAGTGGATGCCGTCACTCCAGCAGTGTTT CGTGACACATTAGCGAAGTACGTACAAGCGGTTCAACCTACAGTTTCGTACATTGGTTCG GCCTCCGCTGTCCCTCGATTTGACGCCCTCACACAAGTAAAGCACATACTTTGA
  • Download Fasta

  • Fasta :-

    MFRPSFCRCLPVLNCTLSAPQCAAAIDRCTPVVYSSLPNGCRVATEYLPNCQFATVGVWI DAGSRFEDINNNGVAHFLEHMNFKGTAKYSKRAVEDLFEHRGAHFNAYTSRDRTAYYVKA FKYDVEKMIDVVSDLLQNGRYDPSDVELERPTILAEMREVEELVDEVLMDNLHQAAYDPA HCGLPLTILGPVENISSRINRDMIQEFVRVHYTGPRMSFISSGGIHPDEAHRLAEKFFGN LPAANNSPLLQSQYRGGYTVMWNEQMATANTAFAYPICGAIHDDSYALQLVHNVIGQVRE GQHDQFAHQRLNPRLPWEKLSNLVQLRPFYTPYKETSLLGYQLVTMRTAVADANGGVQRD ESQTVLLDHMLKLFNELSTKAVDAALLEEAKSEYKSSVMMMRDSTTNSAEDLGRQMIHLG RRVPLREVFERVDAVTPAVFRDTLAKYVQAVQPTVSYIGSASAVPRFDALTQVKHIL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.9.2390404 SMMRDSTTNS0.991unspTbg972.9.2390408 SSTTNSAEDL0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India