Tbg972.9.2640 | presenilin-like aspartic peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.9.2640OTHER0.9999360.0000100.000054
No Results

  • Fasta :-

    >Tbg972.9.2640 MRRSRVPADGVSHILGKRAVALLVPVLITLMLVTWSVLNLSSLIGERQNSLVIVEPHGNE SSSLQVFEASVINALAVVALIVVFTFIMLALYKFGFEIVLYVWLGVSVGSILFITMWVFL DLVLTRFQIPYDFITMFLVLWNTGVVGLVSIFYYSHPTVAQVYLIAISVIVAWSATSLPA WTTWCLLVAVAIYDVVAVLCPYGPLRMLVEAADERNRPIPALVYDSDARIIVATSFPGED AQMVEIAARARKQEGGRQRPRKRPPSPLDSLLGDTPFKLGLGDFIFYSLLCGIAASYSFI PWLMSVIAVLFGLVGTLLFLVLFKEKLTALPALPISIALGVITYFSSRYLVVPLDWFATL SVLAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/788 Sequence name : 788 Sequence length : 365 VALUES OF COMPUTED PARAMETERS Coef20 : 4.348 CoefTot : 0.641 ChDiff : 1 ZoneTo : 45 KR : 5 DE : 1 CleavSite : 20 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.624 3.129 0.531 0.968 MesoH : 1.454 1.853 0.171 0.689 MuHd_075 : 36.757 25.696 10.898 8.879 MuHd_095 : 36.824 21.166 9.989 6.586 MuHd_100 : 29.215 16.585 8.278 4.982 MuHd_105 : 21.129 19.233 5.377 4.765 Hmax_075 : 14.700 18.200 3.624 6.253 Hmax_095 : 10.800 20.800 1.800 3.560 Hmax_100 : -0.700 7.400 -0.737 1.660 Hmax_105 : 1.400 21.000 -0.526 5.731 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7272 0.2728 DFMC : 0.6468 0.3532
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 365 Tbg972.9.2640 MRRSRVPADGVSHILGKRAVALLVPVLITLMLVTWSVLNLSSLIGERQNSLVIVEPHGNESSSLQVFEASVINALAVVAL 80 IVVFTFIMLALYKFGFEIVLYVWLGVSVGSILFITMWVFLDLVLTRFQIPYDFITMFLVLWNTGVVGLVSIFYYSHPTVA 160 QVYLIAISVIVAWSATSLPAWTTWCLLVAVAIYDVVAVLCPYGPLRMLVEAADERNRPIPALVYDSDARIIVATSFPGED 240 AQMVEIAARARKQEGGRQRPRKRPPSPLDSLLGDTPFKLGLGDFIFYSLLCGIAASYSFIPWLMSVIAVLFGLVGTLLFL 320 VLFKEKLTALPALPISIALGVITYFSSRYLVVPLDWFATLSVLAL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.9.2640 2 -----MR|RS 0.079 . Tbg972.9.2640 3 ----MRR|SR 0.186 . Tbg972.9.2640 5 --MRRSR|VP 0.256 . Tbg972.9.2640 17 VSHILGK|RA 0.067 . Tbg972.9.2640 18 SHILGKR|AV 0.167 . Tbg972.9.2640 47 SSLIGER|QN 0.089 . Tbg972.9.2640 93 IMLALYK|FG 0.063 . Tbg972.9.2640 126 LDLVLTR|FQ 0.089 . Tbg972.9.2640 206 CPYGPLR|ML 0.091 . Tbg972.9.2640 215 VEAADER|NR 0.061 . Tbg972.9.2640 217 AADERNR|PI 0.077 . Tbg972.9.2640 229 VYDSDAR|II 0.070 . Tbg972.9.2640 249 MVEIAAR|AR 0.094 . Tbg972.9.2640 251 EIAARAR|KQ 0.114 . Tbg972.9.2640 252 IAARARK|QE 0.270 . Tbg972.9.2640 257 RKQEGGR|QR 0.081 . Tbg972.9.2640 259 QEGGRQR|PR 0.073 . Tbg972.9.2640 261 GGRQRPR|KR 0.084 . Tbg972.9.2640 262 GRQRPRK|RP 0.255 . Tbg972.9.2640 263 RQRPRKR|PP 0.190 . Tbg972.9.2640 278 LGDTPFK|LG 0.053 . Tbg972.9.2640 324 LFLVLFK|EK 0.061 . Tbg972.9.2640 326 LVLFKEK|LT 0.053 . Tbg972.9.2640 348 ITYFSSR|YL 0.095 . ____________________________^_________________

  • Fasta :-

    >Tbg972.9.2640 ATGAGGCGGAGCAGGGTACCCGCAGATGGCGTGAGCCACATTCTCGGTAAACGGGCCGTA GCGCTGCTCGTTCCCGTTTTAATAACACTGATGCTAGTGACGTGGTCTGTACTTAACCTG TCAAGTCTCATTGGGGAACGGCAAAATTCCCTCGTCATCGTTGAACCGCACGGAAACGAG TCAAGTTCGCTGCAGGTATTTGAGGCGTCTGTTATTAATGCTCTGGCAGTTGTTGCGCTT ATTGTGGTCTTCACGTTCATTATGTTGGCGTTGTACAAGTTTGGGTTCGAAATAGTTCTC TACGTGTGGCTGGGTGTGTCTGTGGGGTCAATCCTCTTTATCACGATGTGGGTTTTTTTG GATTTGGTACTTACCCGATTTCAAATACCGTATGATTTCATTACAATGTTTCTGGTTCTG TGGAACACGGGTGTAGTTGGCCTGGTATCAATCTTTTATTATTCGCATCCGACGGTTGCG CAGGTGTACCTTATTGCCATATCGGTTATCGTTGCTTGGTCTGCTACGTCCCTGCCCGCC TGGACCACTTGGTGCTTGCTCGTAGCGGTTGCGATATATGATGTAGTCGCCGTGTTATGT CCGTACGGACCGCTTCGTATGCTCGTGGAGGCTGCTGATGAGCGCAACCGACCCATTCCA GCCCTTGTTTACGACAGTGACGCCCGGATTATTGTTGCAACTTCTTTCCCTGGAGAGGAT GCGCAGATGGTTGAGATTGCGGCCAGGGCCCGAAAGCAAGAGGGAGGCAGGCAGCGACCC CGGAAGCGGCCCCCGTCTCCCCTGGACTCGCTTCTTGGCGACACTCCCTTTAAATTGGGG CTTGGCGATTTCATTTTCTACAGTTTGTTGTGTGGAATCGCTGCGAGCTACTCATTTATT CCGTGGTTGATGTCGGTGATTGCTGTCTTATTCGGCCTAGTTGGTACGTTGCTTTTCTTG GTGCTTTTCAAGGAAAAGTTGACGGCTCTTCCGGCACTTCCTATATCGATAGCTCTGGGG GTGATCACCTACTTTTCATCCCGCTACTTGGTTGTGCCACTGGACTGGTTTGCGACTCTC TCTGTGCTTGCACTGTAG
  • Download Fasta

  • Fasta :-

    MRRSRVPADGVSHILGKRAVALLVPVLITLMLVTWSVLNLSSLIGERQNSLVIVEPHGNE SSSLQVFEASVINALAVVALIVVFTFIMLALYKFGFEIVLYVWLGVSVGSILFITMWVFL DLVLTRFQIPYDFITMFLVLWNTGVVGLVSIFYYSHPTVAQVYLIAISVIVAWSATSLPA WTTWCLLVAVAIYDVVAVLCPYGPLRMLVEAADERNRPIPALVYDSDARIIVATSFPGED AQMVEIAARARKQEGGRQRPRKRPPSPLDSLLGDTPFKLGLGDFIFYSLLCGIAASYSFI PWLMSVIAVLFGLVGTLLFLVLFKEKLTALPALPISIALGVITYFSSRYLVVPLDWFATL SVLAL

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IDSitePeptideScoreMethod
Tbg972.9.2640266 SKRPPSPLDS0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India