Tbg972.9.5530 | proteasome alpha 1 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.9.5530OTHER0.9997950.0001540.000051
No Results

  • Fasta :-

    >Tbg972.9.5530 MSRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRP ETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMPVSVLAKRVADMAQ VRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGWCGSYHACAVGKKQIEACAF LEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFSRVPDREVE EWLTLLAEAD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/298 Sequence name : 298 Sequence length : 250 VALUES OF COMPUTED PARAMETERS Coef20 : 3.692 CoefTot : 0.138 ChDiff : -2 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.012 1.541 0.107 0.511 MesoH : -0.586 0.253 -0.362 0.181 MuHd_075 : 28.307 10.163 6.864 5.284 MuHd_095 : 24.856 11.661 5.862 5.852 MuHd_100 : 12.151 7.653 2.977 3.987 MuHd_105 : 8.098 4.122 0.647 1.831 Hmax_075 : 14.233 7.583 1.353 4.422 Hmax_095 : 13.825 7.962 1.554 4.795 Hmax_100 : 3.200 4.100 -0.962 3.620 Hmax_105 : 2.700 4.900 -1.212 3.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9323 0.0677 DFMC : 0.9458 0.0542
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 250 Tbg972.9.5530 MSRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGR 80 APDGKALVQKARNEASEYKYRYGMPMPVSVLAKRVADMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAG 160 WCGSYHACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFSRVPDREVE 240 EWLTLLAEAD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.9.5530 3 ----MSR|AG 0.095 . Tbg972.9.5530 8 SRAGFDK|YI 0.087 . Tbg972.9.5530 27 QVEYAFK|AV 0.073 . Tbg972.9.5530 40 LLTVAIR|CK 0.104 . Tbg972.9.5530 42 TVAIRCK|DA 0.091 . Tbg972.9.5530 56 QHSVPDK|LM 0.074 . Tbg972.9.5530 59 VPDKLMR|PE 0.075 . Tbg972.9.5530 80 GVCITGR|AP 0.087 . Tbg972.9.5530 85 GRAPDGK|AL 0.091 . Tbg972.9.5530 90 GKALVQK|AR 0.069 . Tbg972.9.5530 92 ALVQKAR|NE 0.086 . Tbg972.9.5530 99 NEASEYK|YR 0.065 . Tbg972.9.5530 101 ASEYKYR|YG 0.117 . Tbg972.9.5530 113 PVSVLAK|RV 0.089 . Tbg972.9.5530 114 VSVLAKR|VA 0.213 . Tbg972.9.5530 122 ADMAQVR|TQ 0.100 . Tbg972.9.5530 129 TQQAGMR|LM 0.117 . Tbg972.9.5530 172 HACAVGK|KQ 0.066 . Tbg972.9.5530 173 ACAVGKK|QI 0.122 . Tbg972.9.5530 183 ACAFLEK|KQ 0.063 . Tbg972.9.5530 184 CAFLEKK|QK 0.106 . Tbg972.9.5530 186 FLEKKQK|NA 0.065 . Tbg972.9.5530 196 FHTLSQK|EA 0.063 . Tbg972.9.5530 215 ALGESLR|AS 0.104 . Tbg972.9.5530 223 SGVEVGR|CT 0.090 . Tbg972.9.5530 233 DDHHFSR|VP 0.100 . Tbg972.9.5530 237 FSRVPDR|EV 0.205 . ____________________________^_________________

  • Fasta :-

    >Tbg972.9.5530 ATGAGCCGAGCTGGGTTTGACAAGTACATTACTGTCTTCAGCCCGGAAGGGTCCCTCTAT CAAGTCGAATATGCCTTCAAGGCAGTTACCTACGCGGGGCTGCTAACGGTGGCCATACGT TGCAAAGATGCTGTGCTTGTTTTCACGCAGCACAGTGTTCCGGACAAGCTTATGCGACCT GAAACCATTACCTCTCTCTACAATGTGAACGATAACACTGGTGTATGCATAACTGGGAGG GCTCCCGATGGAAAGGCGCTTGTGCAGAAGGCACGTAACGAGGCGTCGGAGTACAAGTAC CGCTACGGCATGCCAATGCCTGTTAGCGTCCTCGCAAAGCGAGTGGCAGACATGGCACAG GTGAGGACGCAGCAAGCAGGCATGCGACTGATGGGAACCATCATGACGTTTGTGGGCATG GAACAAAATGATGAGGATGGTGCGTGGATTCCACAGATTTACTGCGTAGACCCAGCGGGG TGGTGCGGCAGCTACCACGCATGTGCCGTGGGGAAAAAGCAAATTGAGGCCTGCGCCTTT CTTGAAAAGAAACAGAAAAATGCACCATTCCACACGTTGTCCCAGAAAGAAGCCGCAATG ATTGCGCTTGCGGCACTCCAGAGCGCACTCGGTGAGTCTTTGAGGGCGTCAGGTGTGGAG GTTGGGAGGTGTACAGCAGATGACCACCATTTCTCACGGGTTCCAGATAGGGAGGTGGAG GAGTGGCTAACTCTACTTGCGGAGGCTGATTAG
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  • Fasta :-

    MSRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRP ETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMPVSVLAKRVADMAQ VRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGWCGSYHACAVGKKQIEACAF LEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFSRVPDREVE EWLTLLAEAD

  • title: active site
  • coordinates: L34,Q50,S52,S65,K172
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.9.5530194 SFHTLSQKEA0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India