Tbg972.9.6750 | proteasome beta 2 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.9.6750OTHER0.9981790.0006070.001214
No Results

  • Fasta :-

    >Tbg972.9.6750 MTGFSFENVQRNLNLEQQGLHPPRTLKTGTTIVGVVFEGGVVLGADTRATEGSIVADKRC KKIHYMAPNIMCCGAGTAADTEAVTNMTAANLTLHRLGTGKQSRVSEALTLLKRHLYRYQ GHVSAALVLGGVDVGGAFLATVAPHGSTDRLPFVAMGSGSIAAMAALETGYKENLTLEEA KQLVVSAIHKGIFNDPYSGTQVDLCVITKAKTEMLIGYDKPNDRKYPKHDIKLPPGTTPV LREEIRQLVTITELE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/648 Sequence name : 648 Sequence length : 255 VALUES OF COMPUTED PARAMETERS Coef20 : 3.510 CoefTot : -0.138 ChDiff : 2 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.929 1.800 0.271 0.690 MesoH : -0.022 0.578 -0.241 0.318 MuHd_075 : 25.436 15.807 6.904 4.474 MuHd_095 : 22.066 12.076 4.769 3.881 MuHd_100 : 21.809 13.404 5.823 4.302 MuHd_105 : 21.138 13.840 6.564 4.807 Hmax_075 : 1.867 3.500 -2.508 1.855 Hmax_095 : 5.337 3.675 -1.683 1.943 Hmax_100 : 3.100 2.700 -1.780 2.130 Hmax_105 : 3.617 7.233 -0.693 3.605 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9109 0.0891 DFMC : 0.8799 0.1201
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 255 Tbg972.9.6750 MTGFSFENVQRNLNLEQQGLHPPRTLKTGTTIVGVVFEGGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCGAGTAAD 80 TEAVTNMTAANLTLHRLGTGKQSRVSEALTLLKRHLYRYQGHVSAALVLGGVDVGGAFLATVAPHGSTDRLPFVAMGSGS 160 IAAMAALETGYKENLTLEEAKQLVVSAIHKGIFNDPYSGTQVDLCVITKAKTEMLIGYDKPNDRKYPKHDIKLPPGTTPV 240 LREEIRQLVTITELE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.9.6750 11 SFENVQR|NL 0.094 . Tbg972.9.6750 24 QGLHPPR|TL 0.107 . Tbg972.9.6750 27 HPPRTLK|TG 0.118 . Tbg972.9.6750 48 VLGADTR|AT 0.099 . Tbg972.9.6750 58 GSIVADK|RC 0.064 . Tbg972.9.6750 59 SIVADKR|CK 0.169 . Tbg972.9.6750 61 VADKRCK|KI 0.066 . Tbg972.9.6750 62 ADKRCKK|IH 0.245 . Tbg972.9.6750 96 ANLTLHR|LG 0.072 . Tbg972.9.6750 101 HRLGTGK|QS 0.076 . Tbg972.9.6750 104 GTGKQSR|VS 0.100 . Tbg972.9.6750 113 EALTLLK|RH 0.050 . Tbg972.9.6750 114 ALTLLKR|HL 0.166 . Tbg972.9.6750 118 LKRHLYR|YQ 0.144 . Tbg972.9.6750 150 PHGSTDR|LP 0.080 . Tbg972.9.6750 172 ALETGYK|EN 0.057 . Tbg972.9.6750 181 LTLEEAK|QL 0.064 . Tbg972.9.6750 190 VVSAIHK|GI 0.072 . Tbg972.9.6750 209 DLCVITK|AK 0.065 . Tbg972.9.6750 211 CVITKAK|TE 0.060 . Tbg972.9.6750 220 MLIGYDK|PN 0.066 . Tbg972.9.6750 224 YDKPNDR|KY 0.072 . Tbg972.9.6750 225 DKPNDRK|YP 0.070 . Tbg972.9.6750 228 NDRKYPK|HD 0.073 . Tbg972.9.6750 232 YPKHDIK|LP 0.060 . Tbg972.9.6750 242 GTTPVLR|EE 0.097 . Tbg972.9.6750 246 VLREEIR|QL 0.095 . ____________________________^_________________

  • Fasta :-

    >Tbg972.9.6750 ATGACAGGGTTCTCATTTGAAAACGTCCAGCGTAACCTAAACCTTGAGCAGCAAGGCCTG CACCCACCAAGGACATTGAAGACTGGCACTACCATTGTAGGAGTTGTATTTGAAGGTGGT GTTGTTTTAGGCGCCGATACGCGGGCTACTGAAGGTTCTATTGTGGCGGACAAGCGATGC AAAAAGATTCACTACATGGCACCCAACATAATGTGCTGTGGGGCCGGAACCGCCGCGGAT ACGGAGGCCGTAACTAATATGACAGCTGCCAACTTGACACTTCACCGTCTTGGGACCGGC AAGCAATCACGTGTGAGTGAGGCGCTGACGCTTCTTAAGCGACACTTGTACCGATACCAG GGACATGTGAGCGCCGCACTTGTCCTCGGTGGTGTAGATGTAGGTGGTGCTTTCCTGGCA ACTGTGGCGCCCCACGGCAGCACTGATCGCCTTCCTTTTGTTGCAATGGGCAGCGGAAGC ATTGCGGCGATGGCAGCCCTGGAGACGGGTTATAAAGAGAACCTTACTCTGGAAGAGGCG AAACAGCTGGTCGTTTCAGCGATTCACAAGGGCATTTTCAATGATCCCTACAGCGGAACG CAGGTAGATCTTTGTGTCATCACGAAGGCAAAGACGGAAATGCTTATCGGGTACGACAAA CCCAATGATCGTAAGTATCCTAAACATGACATCAAGCTCCCCCCTGGTACAACTCCTGTT CTTCGTGAGGAAATACGCCAGTTGGTGACAATCACCGAATTGGAGTGA
  • Download Fasta

  • Fasta :-

    MTGFSFENVQRNLNLEQQGLHPPRTLKTGTTIVGVVFEGGVVLGADTRATEGSIVADKRC KKIHYMAPNIMCCGAGTAADTEAVTNMTAANLTLHRLGTGKQSRVSEALTLLKRHLYRYQ GHVSAALVLGGVDVGGAFLATVAPHGSTDRLPFVAMGSGSIAAMAALETGYKENLTLEEA KQLVVSAIHKGIFNDPYSGTQVDLCVITKAKTEMLIGYDKPNDRKYPKHDIKLPPGTTPV LREEIRQLVTITELE

  • title: active site
  • coordinates: D46,R48,K62,S158,D195,S198,G199
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.9.6750106 SQSRVSEALT0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India