Tbg972.9.8930 | metacaspase 5, putative

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs: GO:0051286 GO:0097014 GO:0005737 GO:0031981
Curated_GO_Components: cell tip ciliary plasm cytoplasm nuclear lumen
Curated_GO_Function_IDs: GO:0030693
Curated_GO_Functions: obsolete caspase activity
Curated_GO_Processes: proteolysis

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	Tbg972.9.8930	SP	0.136439	0.855081	0.008480	CS pos: 23-24. VNS-IG. Pr: 0.3937

No Results

Fasta :-
>Tbg972.9.8930 MDAALALLFGQVATAVLPYVVNSIGRVPRPKRVDVKKAMGEAHQCRPVVPYRAPRPYTEG RVKALFIGINYTGSSAQLGGCVNDVMHMLQTLQRIEFPISECCILVDDRRFPNFTAMPTR ENIIKYMAWLVYDVRPGDVLFFHFSGHGAETKGGRDSNEKMDQCLVPLDYDKAGAILDDD LFELMIKGLPAGVRMTAVFDCCHSASLLDLPFAFVAGRNVSSNQRHEMRMVRKDNYSRGD VVMFSGCEDSGTSADVTNTSSFGNGTVAAGGAATQAFTWALLNTTGYSYIDIFMKTREVL RQKGYKQVPQLSSSKPVDLYKQFSLFGPLTMNASLVQHLPQEYVQPWAPHPAYQQPHEAT LPASVSQPHSQPVMGIPVASTSNGKSNPGVSDGGRASGEVYPPTQYPSSHPAPQQQAYYQ PPQQAYYQPPQQAYYQPPQQAYYQPPQQAYYQPEPHHQPAPPPPPKKENKPARPGYPMSY CMKFSQGKPGRK
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/881 Sequence name : 881 Sequence length : 492 VALUES OF COMPUTED PARAMETERS Coef20 : 4.174 CoefTot : -0.346 ChDiff : 7 ZoneTo : 33 KR : 4 DE : 1 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.606 1.924 0.237 0.695 MesoH : -0.247 0.305 -0.350 0.183 MuHd_075 : 17.385 14.257 5.320 3.910 MuHd_095 : 35.256 33.643 10.491 9.750 MuHd_100 : 37.395 29.975 10.165 9.482 MuHd_105 : 37.358 27.826 9.482 9.269 Hmax_075 : 11.813 20.500 -0.656 1.587 Hmax_095 : 19.000 25.988 4.526 7.630 Hmax_100 : 15.900 21.900 3.905 6.540 Hmax_105 : 14.100 19.833 3.941 5.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3649 0.6351 DFMC : 0.6927 0.3073

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 492 Tbg972.9.8930 MDAALALLFGQVATAVLPYVVNSIGRVPRPKRVDVKKAMGEAHQCRPVVPYRAPRPYTEGRVKALFIGINYTGSSAQLGG 80 CVNDVMHMLQTLQRIEFPISECCILVDDRRFPNFTAMPTRENIIKYMAWLVYDVRPGDVLFFHFSGHGAETKGGRDSNEK 160 MDQCLVPLDYDKAGAILDDDLFELMIKGLPAGVRMTAVFDCCHSASLLDLPFAFVAGRNVSSNQRHEMRMVRKDNYSRGD 240 VVMFSGCEDSGTSADVTNTSSFGNGTVAAGGAATQAFTWALLNTTGYSYIDIFMKTREVLRQKGYKQVPQLSSSKPVDLY 320 KQFSLFGPLTMNASLVQHLPQEYVQPWAPHPAYQQPHEATLPASVSQPHSQPVMGIPVASTSNGKSNPGVSDGGRASGEV 400 YPPTQYPSSHPAPQQQAYYQPPQQAYYQPPQQAYYQPPQQAYYQPPQQAYYQPEPHHQPAPPPPPKKENKPARPGYPMSY 480 CMKFSQGKPGRK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.9.8930 26 VVNSIGR|VP 0.084 . Tbg972.9.8930 29 SIGRVPR|PK 0.245 . Tbg972.9.8930 31 GRVPRPK|RV 0.099 . Tbg972.9.8930 32 RVPRPKR|VD 0.494 . Tbg972.9.8930 36 PKRVDVK|KA 0.085 . Tbg972.9.8930 37 KRVDVKK|AM 0.180 . Tbg972.9.8930 46 GEAHQCR|PV 0.161 . Tbg972.9.8930 52 RPVVPYR|AP 0.106 . Tbg972.9.8930 55 VPYRAPR|PY 0.319 . Tbg972.9.8930 61 RPYTEGR|VK 0.081 . Tbg972.9.8930 63 YTEGRVK|AL 0.072 . Tbg972.9.8930 94 MLQTLQR|IE 0.086 . Tbg972.9.8930 109 CILVDDR|RF 0.065 . Tbg972.9.8930 110 ILVDDRR|FP 0.094 . Tbg972.9.8930 120 FTAMPTR|EN 0.097 . Tbg972.9.8930 125 TRENIIK|YM 0.074 . Tbg972.9.8930 135 WLVYDVR|PG 0.082 . Tbg972.9.8930 152 GHGAETK|GG 0.070 . Tbg972.9.8930 155 AETKGGR|DS 0.115 . Tbg972.9.8930 160 GRDSNEK|MD 0.059 . Tbg972.9.8930 172 VPLDYDK|AG 0.057 . Tbg972.9.8930 187 LFELMIK|GL 0.068 . Tbg972.9.8930 194 GLPAGVR|MT 0.086 . Tbg972.9.8930 218 FAFVAGR|NV 0.138 . Tbg972.9.8930 225 NVSSNQR|HE 0.079 . Tbg972.9.8930 229 NQRHEMR|MV 0.157 . Tbg972.9.8930 232 HEMRMVR|KD 0.220 . Tbg972.9.8930 233 EMRMVRK|DN 0.115 . Tbg972.9.8930 238 RKDNYSR|GD 0.079 . Tbg972.9.8930 295 YIDIFMK|TR 0.059 . Tbg972.9.8930 297 DIFMKTR|EV 0.102 . Tbg972.9.8930 301 KTREVLR|QK 0.101 . Tbg972.9.8930 303 REVLRQK|GY 0.069 . Tbg972.9.8930 306 LRQKGYK|QV 0.090 . Tbg972.9.8930 315 PQLSSSK|PV 0.066 . Tbg972.9.8930 321 KPVDLYK|QF 0.070 . Tbg972.9.8930 385 ASTSNGK|SN 0.071 . Tbg972.9.8930 395 GVSDGGR|AS 0.131 . Tbg972.9.8930 466 APPPPPK|KE 0.058 . Tbg972.9.8930 467 PPPPPKK|EN 0.125 . Tbg972.9.8930 470 PPKKENK|PA 0.113 . Tbg972.9.8930 473 KENKPAR|PG 0.122 . Tbg972.9.8930 483 PMSYCMK|FS 0.077 . Tbg972.9.8930 488 MKFSQGK|PG 0.067 . Tbg972.9.8930 491 SQGKPGR|K- 0.111 . Tbg972.9.8930 492 QGKPGRK|-- 0.077 . ____________________________^_________________

Fasta :-
>Tbg972.9.8930 ATGGACGCAGCTCTCGCTTTGCTATTTGGACAGGTTGCGACCGCAGTCCTGCCTTATGTG GTTAACAGCATTGGCAGGGTTCCACGGCCGAAGCGCGTGGATGTAAAGAAGGCGATGGGA GAGGCGCACCAATGTCGTCCAGTGGTTCCTTACCGGGCTCCCAGACCCTACACGGAGGGA CGTGTGAAGGCACTCTTCATTGGAATCAACTACACGGGCTCGAGTGCACAACTCGGTGGG TGTGTTAATGACGTGATGCATATGCTTCAAACACTGCAGAGAATTGAGTTCCCCATATCT GAGTGCTGCATCCTTGTGGATGACCGCCGCTTTCCAAACTTCACGGCCATGCCAACCCGT GAGAACATTATCAAGTACATGGCATGGCTTGTGTACGATGTACGCCCAGGGGACGTTTTG TTTTTCCACTTCTCTGGACATGGAGCGGAGACGAAGGGAGGACGTGACTCGAACGAAAAG ATGGACCAGTGCCTTGTGCCCTTAGACTACGATAAGGCAGGCGCCATTCTAGATGATGAT TTGTTTGAACTGATGATCAAGGGGCTACCGGCCGGCGTGCGCATGACCGCAGTGTTTGAC TGCTGTCATTCCGCCTCGTTGCTGGACCTCCCCTTTGCATTCGTGGCCGGCAGGAATGTC TCATCTAACCAGCGACACGAAATGCGGATGGTACGGAAGGATAACTACTCTCGGGGTGAT GTGGTAATGTTCAGTGGCTGTGAAGACTCTGGGACAAGTGCGGACGTAACCAACACTTCG TCCTTCGGTAACGGAACCGTAGCTGCGGGCGGCGCGGCTACGCAGGCCTTCACTTGGGCA TTACTTAATACTACAGGATACAGCTACATCGACATATTTATGAAGACGAGGGAGGTGCTT CGCCAGAAGGGCTATAAGCAGGTACCACAATTATCAAGCTCAAAACCGGTTGACTTGTAC AAGCAATTTTCTCTCTTTGGCCCCCTTACCATGAACGCAAGCCTGGTGCAGCATTTGCCT CAGGAGTATGTTCAACCGTGGGCGCCCCATCCGGCATATCAACAACCACACGAAGCAACA CTCCCTGCTTCCGTATCTCAGCCACACTCTCAGCCAGTAATGGGGATCCCTGTTGCATCA ACCAGCAACGGTAAATCAAATCCGGGGGTTTCTGACGGAGGAAGGGCTTCAGGAGAGGTT TACCCACCGACGCAGTACCCATCATCGCACCCGGCGCCCCAACAACAGGCGTATTATCAA CCACCACAACAGGCGTATTACCAACCACCACAACAGGCGTATTACCAACCACCACAACAG GCGTATTATCAACCACCACAACAGGCGTATTACCAACCGGAACCACACCATCAGCCAGCC CCGCCGCCACCACCAAAGAAAGAAAATAAACCGGCGCGACCCGGATACCCGATGAGCTAT TGTATGAAATTTTCGCAGGGTAAACCCGGCCGCAAGTGA
Download Fasta

Fasta :-

MDAALALLFGQVATAVLPYVVNSIGRVPRPKRVDVKKAMGEAHQCRPVVPYRAPRPYTEG RVKALFIGINYTGSSAQLGGCVNDVMHMLQTLQRIEFPISECCILVDDRRFPNFTAMPTR ENIIKYMAWLVYDVRPGDVLFFHFSGHGAETKGGRDSNEKMDQCLVPLDYDKAGAILDDD LFELMIKGLPAGVRMTAVFDCCHSASLLDLPFAFVAGRNVSSNQRHEMRMVRKDNYSRGD VVMFSGCEDSGTSADVTNTSSFGNGTVAAGGAATQAFTWALLNTTGYSYIDIFMKTREVL RQKGYKQVPQLSSSKPVDLYKQFSLFGPLTMNASLVQHLPQEYVQPWAPHPAYQQPHEAT LPASVSQPHSQPVMGIPVASTSNGKSNPGVSDGGRASGEVYPPTQYPSSHPAPQQQAYYQ PPQQAYYQPPQQAYYQPPQQAYYQPPQQAYYQPEPHHQPAPPPPPKKENKPARPGYPMSY CMKFSQGKPGRK

Gingipain R (RgpB), N-terminal domain

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	Tbg972.9.8930	397 S	GGRASGEVY	0.991	unsp	Tbg972.9.8930	397 S	GGRASGEVY	0.991	unsp	Tbg972.9.8930	397 S	GGRASGEVY	0.991	unsp	Tbg972.9.8930	157 S	GGRDSNEKM	0.995	unsp	Tbg972.9.8930	237 S	KDNYSRGDV	0.993	unsp

Tbg972.9.8930 | metacaspase 5, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs: GO:0051286 GO:0097014 GO:0005737 GO:0031981

Curated_GO_Components: cell tip ciliary plasm cytoplasm nuclear lumen

Curated_GO_Function_IDs: GO:0030693

Curated_GO_Functions: obsolete caspase activity

Curated_GO_Processes: proteolysis

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Gingipain R (RgpB), N-terminal domain

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India