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_ID
Prediction
OTHER
SP
mTP
CS_Position
YDL007W OTHER 0.999984 0.000001 0.000014
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >YDL007W MGQGVSSGQDKKKKKGSNQKPKYEPPVQSKFGRKKRKGGPATAEKLPNIYPSTRCKLKLL RMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIV TSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTES YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT SATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGER EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKK ILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAK ERVMKNKVEENLEGLYL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YDL007W.fa Sequence name : YDL007W Sequence length : 437 VALUES OF COMPUTED PARAMETERS Coef20 : 2.712 CoefTot : -4.886 ChDiff : -6 ZoneTo : 62 KR : 18 DE : 3 CleavSite : 38 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.853 1.147 0.004 0.422 MesoH : -0.651 0.321 -0.358 0.225 MuHd_075 : 33.139 17.877 9.357 6.773 MuHd_095 : 38.391 19.028 9.841 7.758 MuHd_100 : 37.152 19.026 10.313 7.207 MuHd_105 : 39.766 25.093 10.359 8.463 Hmax_075 : -2.683 -0.583 -2.709 1.003 Hmax_095 : 2.012 1.225 -1.442 2.144 Hmax_100 : 2.500 10.000 -1.442 2.330 Hmax_105 : 10.150 13.183 2.164 4.235 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7821 0.2179 DFMC : 0.8017 0.1983
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 437 YDL007W MGQGVSSGQDKKKKKGSNQKPKYEPPVQSKFGRKKRKGGPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSE 80 ILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVL 160 QDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 240 SATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRG 320 DVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAG 400 LLALRERRMQVTAEDFKQAKERVMKNKVEENLEGLYL 480 ...................................P............................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ YDL007W 11 VSSGQDK|KK 0.077 . YDL007W 12 SSGQDKK|KK 0.092 . YDL007W 13 SGQDKKK|KK 0.145 . YDL007W 14 GQDKKKK|KG 0.114 . YDL007W 15 QDKKKKK|GS 0.179 . YDL007W 20 KKGSNQK|PK 0.064 . YDL007W 22 GSNQKPK|YE 0.100 . YDL007W 30 EPPVQSK|FG 0.076 . YDL007W 33 VQSKFGR|KK 0.197 . YDL007W 34 QSKFGRK|KR 0.088 . YDL007W 35 SKFGRKK|RK 0.114 . YDL007W 36 KFGRKKR|KG 0.735 *ProP* YDL007W 37 FGRKKRK|GG 0.098 . YDL007W 45 GPATAEK|LP 0.061 . YDL007W 54 NIYPSTR|CK 0.093 . YDL007W 56 YPSTRCK|LK 0.061 . YDL007W 58 STRCKLK|LL 0.067 . YDL007W 61 CKLKLLR|ME 0.076 . YDL007W 64 KLLRMER|IK 0.201 . YDL007W 66 LRMERIK|DH 0.069 . YDL007W 83 SNSEILK|PF 0.080 . YDL007W 87 ILKPFEK|KQ 0.065 . YDL007W 88 LKPFEKK|QE 0.106 . YDL007W 93 KKQEEEK|KQ 0.061 . YDL007W 94 KQEEEKK|QL 0.157 . YDL007W 100 KQLEEIR|GN 0.099 . YDL007W 138 ILSFVDK|EL 0.074 . YDL007W 152 SVLLHHK|TM 0.063 . YDL007W 172 PMVSVMK|MD 0.059 . YDL007W 175 SVMKMDK|SP 0.078 . YDL007W 195 SQIQEIK|ES 0.057 . YDL007W 214 YEEMGIK|PP 0.060 . YDL007W 217 MGIKPPK|GV 0.090 . YDL007W 229 GAPGTGK|TL 0.058 . YDL007W 234 GKTLLAK|AV 0.080 . YDL007W 246 TSATFLR|IV 0.236 . YDL007W 255 GSELIQK|YL 0.083 . YDL007W 262 YLGDGPR|LC 0.091 . YDL007W 265 DGPRLCR|QI 0.216 . YDL007W 269 LCRQIFK|VA 0.085 . YDL007W 290 IDAIGTK|RY 0.058 . YDL007W 291 DAIGTKR|YD 0.205 . YDL007W 300 SNSGGER|EI 0.095 . YDL007W 304 GEREIQR|TM 0.087 . YDL007W 319 LDGFDDR|GD 0.099 . YDL007W 323 DDRGDVK|VI 0.063 . YDL007W 330 VIMATNK|IE 0.056 . YDL007W 340 LDPALIR|PG 0.078 . YDL007W 343 ALIRPGR|ID 0.273 . YDL007W 346 RPGRIDR|KI 0.235 . YDL007W 347 PGRIDRK|IL 0.084 . YDL007W 358 NPDLSTK|KK 0.063 . YDL007W 359 PDLSTKK|KI 0.095 . YDL007W 360 DLSTKKK|IL 0.193 . YDL007W 368 LGIHTSK|MN 0.060 . YDL007W 384 ETLVTTK|DD 0.061 . YDL007W 405 AGLLALR|ER 0.065 . YDL007W 407 LLALRER|RM 0.076 . YDL007W 408 LALRERR|MQ 0.388 . YDL007W 417 VTAEDFK|QA 0.060 . YDL007W 420 EDFKQAK|ER 0.062 . YDL007W 422 FKQAKER|VM 0.099 . YDL007W 425 AKERVMK|NK 0.117 . YDL007W 427 ERVMKNK|VE 0.083 . ____________________________^_________________
  • Fasta :-

    >YDL007W ATGGGACAAGGTGTATCATCTGGACAAGACAAAAAGAAGAAGAAGGGATCTAATCAGAAA CCCAAATATGAACCTCCCGTTCAATCTAAATTTGGTCGTAAGAAAAGAAAGGGAGGTCCA GCTACTGCTGAAAAATTACCCAACATATATCCAAGTACTCGTTGTAAGTTAAAGCTTCTA AGGATGGAACGAATTAAAGACCATTTGTTATTAGAAGAAGAATTTGTCTCTAACTCTGAA ATTTTAAAACCCTTTGAAAAGAAGCAGGAGGAGGAAAAGAAACAATTGGAAGAAATACGT GGAAATCCATTGAGCATTGGGACCCTTGAAGAAATTATAGACGATGATCATGCGATAGTG ACAAGTCCAACTATGCCTGATTATTATGTATCTATCTTATCCTTTGTCGATAAAGAGTTA CTAGAGCCTGGATGTTCTGTGTTATTGCATCATAAAACCATGTCCATCGTAGGTGTTTTA CAGGATGACGCCGATCCAATGGTTTCGGTCATGAAAATGGATAAGTCGCCAACAGAATCA TACAGTGATATTGGTGGCTTAGAATCTCAAATTCAAGAAATAAAAGAGTCTGTAGAGTTA CCGTTAACACACCCCGAACTGTATGAAGAGATGGGTATCAAACCTCCCAAGGGTGTGATT CTTTATGGTGCACCCGGTACAGGTAAGACATTGCTAGCAAAGGCTGTTGCAAATCAAACA TCTGCCACATTCTTAAGGATTGTTGGCTCAGAGTTAATTCAAAAATATTTGGGGGATGGT CCTAGGTTGTGTAGGCAAATTTTCAAAGTAGCGGGTGAGAATGCACCAAGTATTGTATTT ATTGATGAAATAGACGCCATTGGTACTAAAAGATATGACTCCAATAGTGGTGGTGAGAGA GAAATTCAGAGAACCATGCTGGAATTGCTGAACCAGCTGGACGGGTTCGACGACAGAGGG GATGTGAAGGTGATTATGGCCACTAACAAAATCGAGACTCTTGACCCAGCATTAATCAGG CCTGGGAGAATTGATCGTAAAATCTTATTTGAAAACCCTGATCTAAGTACTAAGAAAAAA ATTTTAGGGATTCACACTTCCAAGATGAATTTAAGTGAGGACGTTAATCTTGAAACTTTA GTAACAACAAAGGATGATTTGTCAGGCGCCGATATCCAGGCAATGTGTACAGAAGCAGGT TTGTTAGCCCTTAGAGAGAGAAGAATGCAAGTTACAGCGGAGGATTTTAAACAAGCCAAG GAGAGAGTCATGAAAAATAAAGTTGAGGAAAATTTAGAAGGTTTATACTTGTGA
  • Download Fasta
  • Fasta :-

    MGQGVSSGQDKKKKKGSNQKPKYEPPVQSKFGRKKRKGGPATAEKLPNIYPSTRCKLKLL RMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIV TSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTES YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT SATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGER EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKK ILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAK ERVMKNKVEENLEGLYL

  • title: ATP binding site
  • coordinates: A224,P225,G226,T227,G228,K229,T230,L231,D282,N329
No Results
No Results
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
YDL007W 294 S KRYDSNSGG 0.997 unsp YDL007W 294 S KRYDSNSGG 0.997 unsp YDL007W 294 S KRYDSNSGG 0.997 unsp YDL007W 296 S YDSNSGGER 0.995 unsp YDL007W 388 S KDDLSGADI 0.993 unsp YDL007W 176 S KMDKSPTES 0.997 unsp YDL007W 180 S SPTESYSDI 0.995 unsp
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YDL007W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India