YDL104C | putative N(6)-L-threonylcarbamoyladenine synthase

_IDPredictionOTHERSPmTPCS_Position
YDL104COTHER0.9249280.0021340.072938
No Results

  • Fasta :-

    >YDL104C MISIKGTGRFLLDNYRIWQRRAFNRPIQLRKGYKVLAIETSCDDTCVSVLDRFSKSAAPN VLANLKDTLDSIDEGGIIPTKAHIHHQARIGPLTERALIESNAREGIDLICVTRGPGMPG SLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVPQFPFVSLLVSGGHTTFVL SRAIDDHEILCDTIDIAVGDSLDKCGRELGFKGTMIAREMEKFINQDINDQDFALKLEMP SPLKNSASKRNMLSFSFSAFITALRTNLTKLGKTEIQELPEREIRSIAYQVQESVFDHII NKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETELGTLNSTSFFNFYYPPMDLCS DNSIMIGWAGIEIWESLRLVSDLDICPIRQWPLNDLLSVDGWRTDQL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YDL104C.fa Sequence name : YDL104C Sequence length : 407 VALUES OF COMPUTED PARAMETERS Coef20 : 4.278 CoefTot : -0.780 ChDiff : 1 ZoneTo : 38 KR : 9 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.747 1.400 0.152 0.613 MesoH : 0.276 0.541 -0.220 0.339 MuHd_075 : 61.855 25.288 12.040 14.375 MuHd_095 : 52.013 18.069 10.023 10.148 MuHd_100 : 52.714 18.950 10.494 10.771 MuHd_105 : 44.859 20.388 11.031 9.997 Hmax_075 : 10.300 8.800 0.107 5.060 Hmax_095 : 5.863 9.013 0.094 3.550 Hmax_100 : 8.500 6.000 -0.698 4.300 Hmax_105 : 11.000 10.600 1.287 5.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0122 0.9878 DFMC : 0.0185 0.9815 This protein is probably imported in mitochondria. f(Ser) = 0.0263 f(Arg) = 0.1579 CMi = 0.09042 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 407 YDL104C MISIKGTGRFLLDNYRIWQRRAFNRPIQLRKGYKVLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTLDSIDEGGIIPT 80 KAHIHHQARIGPLTERALIESNAREGIDLICVTRGPGMPGSLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGK 160 VPQFPFVSLLVSGGHTTFVLSRAIDDHEILCDTIDIAVGDSLDKCGRELGFKGTMIAREMEKFINQDINDQDFALKLEMP 240 SPLKNSASKRNMLSFSFSAFITALRTNLTKLGKTEIQELPEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREF 320 VCSGGVSSNQRLRTKLETELGTLNSTSFFNFYYPPMDLCSDNSIMIGWAGIEIWESLRLVSDLDICPIRQWPLNDLLSVD 400 GWRTDQL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YDL104C 5 --MISIK|GT 0.079 . YDL104C 9 SIKGTGR|FL 0.095 . YDL104C 16 FLLDNYR|IW 0.067 . YDL104C 20 NYRIWQR|RA 0.086 . YDL104C 21 YRIWQRR|AF 0.148 . YDL104C 25 QRRAFNR|PI 0.107 . YDL104C 30 NRPIQLR|KG 0.108 . YDL104C 31 RPIQLRK|GY 0.080 . YDL104C 34 QLRKGYK|VL 0.063 . YDL104C 52 CVSVLDR|FS 0.109 . YDL104C 55 VLDRFSK|SA 0.222 . YDL104C 66 NVLANLK|DT 0.067 . YDL104C 81 GGIIPTK|AH 0.062 . YDL104C 89 HIHHQAR|IG 0.098 . YDL104C 96 IGPLTER|AL 0.081 . YDL104C 104 LIESNAR|EG 0.077 . YDL104C 114 DLICVTR|GP 0.088 . YDL104C 130 GGLDFAK|GL 0.068 . YDL104C 138 LAVAWNK|PL 0.073 . YDL104C 154 GHLLIPR|MG 0.073 . YDL104C 160 RMGTNGK|VP 0.055 . YDL104C 182 TTFVLSR|AI 0.135 . YDL104C 204 VGDSLDK|CG 0.053 . YDL104C 207 SLDKCGR|EL 0.117 . YDL104C 212 GRELGFK|GT 0.080 . YDL104C 218 KGTMIAR|EM 0.105 . YDL104C 222 IAREMEK|FI 0.081 . YDL104C 236 DQDFALK|LE 0.054 . YDL104C 244 EMPSPLK|NS 0.055 . YDL104C 249 LKNSASK|RN 0.065 . YDL104C 250 KNSASKR|NM 0.193 . YDL104C 265 AFITALR|TN 0.072 . YDL104C 270 LRTNLTK|LG 0.063 . YDL104C 273 NLTKLGK|TE 0.062 . YDL104C 282 IQELPER|EI 0.082 . YDL104C 285 LPEREIR|SI 0.463 . YDL104C 302 FDHIINK|LK 0.061 . YDL104C 304 HIINKLK|HV 0.094 . YDL104C 308 KLKHVLK|SQ 0.089 . YDL104C 313 LKSQPEK|FK 0.085 . YDL104C 315 SQPEKFK|NV 0.083 . YDL104C 318 EKFKNVR|EF 0.085 . YDL104C 331 GVSSNQR|LR 0.094 . YDL104C 333 SSNQRLR|TK 0.094 . YDL104C 335 NQRLRTK|LE 0.060 . YDL104C 378 EIWESLR|LV 0.093 . YDL104C 389 LDICPIR|QW 0.073 . YDL104C 403 LSVDGWR|TD 0.072 . ____________________________^_________________

  • Fasta :-

    >YDL104C ATGATATCAATAAAAGGAACCGGAAGATTTCTCCTCGATAACTATAGAATTTGGCAGAGG CGTGCATTCAACAGACCAATACAGTTAAGAAAAGGCTATAAAGTTTTAGCCATTGAGACT TCTTGCGATGATACATGCGTTTCAGTTTTGGACAGGTTCTCAAAAAGTGCAGCTCCTAAT GTGCTAGCCAATTTGAAAGATACTTTAGATAGTATTGACGAAGGAGGTATTATACCAACA AAGGCTCATATCCATCACCAAGCTCGGATAGGACCCTTAACCGAAAGAGCCCTGATAGAA AGCAATGCGAGAGAAGGAATTGATCTCATATGTGTTACAAGAGGCCCTGGTATGCCTGGT TCATTATCAGGAGGATTAGATTTTGCAAAAGGTTTAGCTGTTGCCTGGAACAAACCACTG ATTGGTGTGCATCACATGCTGGGACACTTGCTGATACCAAGAATGGGTACAAATGGAAAA GTGCCTCAATTTCCCTTTGTTAGCCTGCTGGTTAGTGGTGGTCATACTACGTTTGTTTTG TCACGAGCAATTGACGATCACGAAATATTATGTGATACTATCGATATTGCAGTGGGTGAC TCATTAGATAAATGTGGCAGAGAGCTTGGATTCAAGGGAACAATGATCGCTAGAGAAATG GAGAAATTTATTAATCAAGATATTAACGACCAAGATTTTGCTTTAAAACTAGAAATGCCC AGTCCGTTAAAAAACAGCGCTAGTAAAAGAAACATGCTTTCGTTTTCGTTTTCAGCATTT ATCACAGCATTAAGAACTAATTTGACAAAACTAGGTAAAACAGAAATCCAGGAACTGCCA GAACGCGAAATACGGTCAATTGCATATCAAGTACAGGAATCTGTTTTCGACCATATAATA AATAAACTGAAGCACGTGCTCAAGTCACAACCGGAAAAGTTTAAAAACGTGCGTGAATTT GTATGTTCTGGTGGAGTGAGTAGTAATCAAAGGTTGAGAACAAAATTAGAAACGGAATTG GGGACGTTGAACTCCACAAGCTTTTTTAATTTTTATTATCCTCCTATGGACCTTTGTAGT GACAACTCTATTATGATCGGCTGGGCAGGTATCGAGATATGGGAAAGCTTACGATTAGTT AGTGATTTAGATATATGTCCAATTAGGCAATGGCCATTGAATGACCTATTAAGTGTTGAT GGTTGGAGAACGGACCAGCTATGA
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  • Fasta :-

    MISIKGTGRFLLDNYRIWQRRAFNRPIQLRKGYKVLAIETSCDDTCVSVLDRFSKSAAPN VLANLKDTLDSIDEGGIIPTKAHIHHQARIGPLTERALIESNAREGIDLICVTRGPGMPG SLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVPQFPFVSLLVSGGHTTFVL SRAIDDHEILCDTIDIAVGDSLDKCGRELGFKGTMIAREMEKFINQDINDQDFALKLEMP SPLKNSASKRNMLSFSFSAFITALRTNLTKLGKTEIQELPEREIRSIAYQVQESVFDHII NKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETELGTLNSTSFFNFYYPPMDLCS DNSIMIGWAGIEIWESLRLVSDLDICPIRQWPLNDLLSVDGWRTDQL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
YDL104C294 SQVQESVFDH0.992unsp

YDL104C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India