YDR036C | Ehd3p

_IDPredictionOTHERSPmTPCS_Position
YDR036CmTP0.0060400.0000250.993935CS pos: 24-25. RTF-MT. Pr: 0.4097
No Results

  • Fasta :-

    >YDR036C MLRNTLKCAQLSSKYGFKTTTRTFMTTQPQLNVTDAPPVLFTVQDTARVITLNRPKKLNA LNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDVATVAIFNFNKEFAKSIKF FTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPD VGSTFALPRIVTLANSNSQMALYLCLTGEVVTGADAYMLGLASHYVSSENLDALQKRLGE ISPPFNNDPQSAYFFGMVNESIDEFVSPLPKDYVFKYSNEKLNVIEACFNLSKNGTIEDI MNNLRQYEGSAEGKAFAQEIKTKLLTKSPSSLQIALRLVQENSRDHIESAIKRDLYTAAN MCMNQDSLVEFSEATKHKLIDKQRVPYPWTKKEQLFVSQLTSITSPKPSLPMSLLRNTSN VTWTQYPYHSKYQLPTEQEIAAYIEKRTNDDTGAKVTEREVLNHFANVIPSRRGKLGIQS LCKIVCERKCEEVNDGLRWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YDR036C.fa Sequence name : YDR036C Sequence length : 500 VALUES OF COMPUTED PARAMETERS Coef20 : 4.308 CoefTot : -0.609 ChDiff : 5 ZoneTo : 34 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.382 1.182 0.172 0.594 MesoH : 0.153 0.497 -0.210 0.319 MuHd_075 : 28.323 17.625 8.150 7.046 MuHd_095 : 47.157 19.207 13.641 8.504 MuHd_100 : 45.872 19.635 13.449 8.151 MuHd_105 : 36.095 16.424 11.253 6.362 Hmax_075 : 7.263 9.625 1.023 3.447 Hmax_095 : 13.000 6.300 2.420 3.220 Hmax_100 : 13.700 10.300 2.790 4.270 Hmax_105 : 8.700 8.517 2.268 3.582 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0788 0.9212 DFMC : 0.0568 0.9432 This protein is probably imported in mitochondria. f(Ser) = 0.0588 f(Arg) = 0.0588 CMi = 0.38610 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 500 YDR036C MLRNTLKCAQLSSKYGFKTTTRTFMTTQPQLNVTDAPPVLFTVQDTARVITLNRPKKLNALNAEMSESMFKTLNEYAKSD 80 TTNLVILKSSNRPRSFCAGGDVATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFR 160 IATENTKWAMPEMDIGFFPDVGSTFALPRIVTLANSNSQMALYLCLTGEVVTGADAYMLGLASHYVSSENLDALQKRLGE 240 ISPPFNNDPQSAYFFGMVNESIDEFVSPLPKDYVFKYSNEKLNVIEACFNLSKNGTIEDIMNNLRQYEGSAEGKAFAQEI 320 KTKLLTKSPSSLQIALRLVQENSRDHIESAIKRDLYTAANMCMNQDSLVEFSEATKHKLIDKQRVPYPWTKKEQLFVSQL 400 TSITSPKPSLPMSLLRNTSNVTWTQYPYHSKYQLPTEQEIAAYIEKRTNDDTGAKVTEREVLNHFANVIPSRRGKLGIQS 480 LCKIVCERKCEEVNDGLRWK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YDR036C 3 ----MLR|NT 0.075 . YDR036C 7 MLRNTLK|CA 0.067 . YDR036C 14 CAQLSSK|YG 0.065 . YDR036C 18 SSKYGFK|TT 0.071 . YDR036C 22 GFKTTTR|TF 0.094 . YDR036C 48 TVQDTAR|VI 0.097 . YDR036C 54 RVITLNR|PK 0.065 . YDR036C 56 ITLNRPK|KL 0.061 . YDR036C 57 TLNRPKK|LN 0.273 . YDR036C 71 MSESMFK|TL 0.062 . YDR036C 78 TLNEYAK|SD 0.111 . YDR036C 88 TNLVILK|SS 0.068 . YDR036C 92 ILKSSNR|PR 0.076 . YDR036C 94 KSSNRPR|SF 0.378 . YDR036C 112 AIFNFNK|EF 0.065 . YDR036C 116 FNKEFAK|SI 0.087 . YDR036C 119 EFAKSIK|FF 0.077 . YDR036C 136 QIATYLK|PI 0.064 . YDR036C 160 SIHTPFR|IA 0.128 . YDR036C 167 IATENTK|WA 0.069 . YDR036C 189 STFALPR|IV 0.113 . YDR036C 236 NLDALQK|RL 0.062 . YDR036C 237 LDALQKR|LG 0.198 . YDR036C 271 FVSPLPK|DY 0.067 . YDR036C 276 PKDYVFK|YS 0.080 . YDR036C 281 FKYSNEK|LN 0.054 . YDR036C 293 ACFNLSK|NG 0.057 . YDR036C 305 DIMNNLR|QY 0.089 . YDR036C 314 EGSAEGK|AF 0.084 . YDR036C 321 AFAQEIK|TK 0.053 . YDR036C 323 AQEIKTK|LL 0.076 . YDR036C 327 KTKLLTK|SP 0.076 . YDR036C 337 SLQIALR|LV 0.108 . YDR036C 344 LVQENSR|DH 0.080 . YDR036C 352 HIESAIK|RD 0.051 . YDR036C 353 IESAIKR|DL 0.365 . YDR036C 376 EFSEATK|HK 0.057 . YDR036C 378 SEATKHK|LI 0.098 . YDR036C 382 KHKLIDK|QR 0.060 . YDR036C 384 KLIDKQR|VP 0.086 . YDR036C 391 VPYPWTK|KE 0.061 . YDR036C 392 PYPWTKK|EQ 0.066 . YDR036C 407 TSITSPK|PS 0.063 . YDR036C 416 LPMSLLR|NT 0.131 . YDR036C 431 QYPYHSK|YQ 0.065 . YDR036C 446 IAAYIEK|RT 0.064 . YDR036C 447 AAYIEKR|TN 0.214 . YDR036C 455 NDDTGAK|VT 0.062 . YDR036C 459 GAKVTER|EV 0.116 . YDR036C 472 ANVIPSR|RG 0.085 . YDR036C 473 NVIPSRR|GK 0.128 . YDR036C 475 IPSRRGK|LG 0.220 . YDR036C 483 GIQSLCK|IV 0.069 . YDR036C 488 CKIVCER|KC 0.100 . YDR036C 489 KIVCERK|CE 0.073 . YDR036C 498 EVNDGLR|WK 0.075 . YDR036C 500 NDGLRWK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >YDR036C ATGCTCAGAAATACGCTAAAATGTGCCCAATTGTCGTCTAAATACGGATTTAAAACTACC ACACGTACATTCATGACTACTCAACCCCAGCTAAATGTCACCGACGCACCACCTGTGCTA TTTACCGTTCAAGATACAGCTAGAGTTATCACGCTAAATAGGCCCAAAAAGCTCAATGCT TTGAACGCCGAAATGTCAGAATCCATGTTCAAGACTTTGAACGAGTATGCAAAGAGCGAT ACTACAAACTTAGTCATTTTAAAGTCATCCAACCGACCACGTTCGTTCTGTGCTGGTGGT GATGTAGCTACTGTGGCAATATTCAATTTTAACAAAGAATTTGCCAAGTCCATCAAATTT TTTACTGATGAATATTCTTTGAATTTTCAAATAGCAACTTACTTGAAACCAATTGTTACC TTCATGGACGGTATCACCATGGGTGGCGGCGTTGGTCTATCCATTCACACGCCCTTTAGA ATTGCTACAGAAAACACCAAATGGGCCATGCCCGAGATGGACATTGGTTTTTTTCCAGAT GTAGGCTCAACTTTTGCTCTCCCTAGAATCGTGACATTGGCTAACTCAAACTCACAAATG GCCCTGTATCTATGTCTTACAGGAGAAGTAGTCACAGGAGCAGACGCTTATATGCTCGGC TTAGCGTCTCATTACGTCAGTAGTGAAAATTTAGATGCTTTGCAGAAAAGATTAGGTGAA ATTAGCCCCCCTTTTAATAACGATCCACAATCTGCATACTTCTTCGGGATGGTTAACGAA TCCATCGACGAATTCGTATCACCATTACCAAAAGATTATGTTTTCAAGTATTCTAACGAG AAATTAAACGTTATTGAAGCCTGTTTTAACTTGTCTAAAAATGGTACTATTGAAGACATA ATGAATAACTTACGTCAATATGAAGGTTCTGCGGAAGGTAAGGCTTTCGCACAAGAAATC AAAACGAAATTGTTAACCAAGTCACCATCCTCTCTTCAAATCGCCTTGAGATTGGTGCAA GAGAATTCCAGAGATCACATAGAATCTGCTATCAAAAGAGACTTATACACAGCAGCTAAC ATGTGCATGAACCAGGACTCTTTGGTGGAATTCTCTGAAGCCACAAAGCATAAACTTATT GATAAACAAAGGGTCCCGTATCCATGGACAAAGAAGGAACAGTTATTTGTATCTCAGTTG ACATCTATCACATCTCCTAAACCATCGCTACCAATGTCATTACTAAGAAATACCTCGAAT GTTACTTGGACTCAATATCCCTACCATTCTAAATACCAATTGCCTACAGAACAGGAAATC GCTGCGTATATTGAAAAGAGAACGAATGATGACACTGGCGCCAAAGTTACCGAAAGAGAA GTACTAAATCACTTTGCCAATGTGATTCCTTCTAGAAGAGGGAAACTGGGTATCCAATCG CTATGTAAAATTGTTTGTGAAAGAAAATGTGAAGAAGTTAACGATGGCTTAAGATGGAAA TAA
  • Download Fasta

  • Fasta :-

    MLRNTLKCAQLSSKYGFKTTTRTFMTTQPQLNVTDAPPVLFTVQDTARVITLNRPKKLNA LNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDVATVAIFNFNKEFAKSIKF FTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPD VGSTFALPRIVTLANSNSQMALYLCLTGEVVTGADAYMLGLASHYVSSENLDALQKRLGE ISPPFNNDPQSAYFFGMVNESIDEFVSPLPKDYVFKYSNEKLNVIEACFNLSKNGTIEDI MNNLRQYEGSAEGKAFAQEIKTKLLTKSPSSLQIALRLVQENSRDHIESAIKRDLYTAAN MCMNQDSLVEFSEATKHKLIDKQRVPYPWTKKEQLFVSQLTSITSPKPSLPMSLLRNTSN VTWTQYPYHSKYQLPTEQEIAAYIEKRTNDDTGAKVTEREVLNHFANVIPSRRGKLGIQS LCKIVCERKCEEVNDGLRWK

    No Results
  • title: substrate binding site
  • coordinates: L58,A60,R94,A98,G99,G100,D101,V102,I145,M147,G148,G149,P171,E172,I175
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YDR036C95 SNRPRSFCAG0.991unspYDR036C227 SSHYVSSENL0.991unsp

YDR036C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India