YDR331W | GPI-anchor transamidase

_IDPredictionOTHERSPmTPCS_Position
YDR331WSP0.0011200.9988660.000014CS pos: 22-23. SGA-NN. Pr: 0.8099
No Results

  • Fasta :-

    >YDR331W MRIAMHLPLLLLYIFLLPLSGANNTDAAHEVIATNTNNWAVLVSTSRFWFNYRHMANVLS MYRTVKRLGIPDSQIILMLSDDVACNSRNLFPGSVFNNKDHAIDLYGDSVEVDYRGYEVT VENFIRLLTDRWTEDHPKSKRLLTDENSNIFIYMTGHGGDDFLKFQDAEEIASEDIADAF QQMYEKKRYNEIFFMIDTCQANTMYSKFYSPNILAVGSSEMDESSYSHHSDVEIGVAVID RFTYYCLDFLEQIDKNSTLTLQDLFDSFTFEKIHSHVGVRTDLFDRNPSEVLITDFFANV QNVIPDDSKPLSVSHYHHYKDHIDTAQYELNNNVLDLALETYRKNNQSSKIEKKIKDIKS TSVLDVDIDSNECFFTSFKQSATIILALIVTILWFMLRGNTAKATYDLYTN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YDR331W.fa Sequence name : YDR331W Sequence length : 411 VALUES OF COMPUTED PARAMETERS Coef20 : 4.441 CoefTot : 0.085 ChDiff : -22 ZoneTo : 25 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.435 2.506 0.414 0.865 MesoH : -0.240 0.412 -0.369 0.240 MuHd_075 : 16.030 11.210 4.264 3.323 MuHd_095 : 20.658 13.311 5.582 4.883 MuHd_100 : 18.535 9.525 4.929 4.197 MuHd_105 : 18.245 12.107 5.129 4.595 Hmax_075 : 21.700 21.700 3.821 7.630 Hmax_095 : 18.288 22.225 3.859 7.455 Hmax_100 : 18.700 22.600 3.983 7.320 Hmax_105 : 19.000 26.000 4.758 7.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9310 0.0690 DFMC : 0.9254 0.0746
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 411 YDR331W MRIAMHLPLLLLYIFLLPLSGANNTDAAHEVIATNTNNWAVLVSTSRFWFNYRHMANVLSMYRTVKRLGIPDSQIILMLS 80 DDVACNSRNLFPGSVFNNKDHAIDLYGDSVEVDYRGYEVTVENFIRLLTDRWTEDHPKSKRLLTDENSNIFIYMTGHGGD 160 DFLKFQDAEEIASEDIADAFQQMYEKKRYNEIFFMIDTCQANTMYSKFYSPNILAVGSSEMDESSYSHHSDVEIGVAVID 240 RFTYYCLDFLEQIDKNSTLTLQDLFDSFTFEKIHSHVGVRTDLFDRNPSEVLITDFFANVQNVIPDDSKPLSVSHYHHYK 320 DHIDTAQYELNNNVLDLALETYRKNNQSSKIEKKIKDIKSTSVLDVDIDSNECFFTSFKQSATIILALIVTILWFMLRGN 400 TAKATYDLYTN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YDR331W 2 -----MR|IA 0.101 . YDR331W 47 VLVSTSR|FW 0.103 . YDR331W 53 RFWFNYR|HM 0.099 . YDR331W 63 NVLSMYR|TV 0.074 . YDR331W 66 SMYRTVK|RL 0.139 . YDR331W 67 MYRTVKR|LG 0.125 . YDR331W 88 DVACNSR|NL 0.084 . YDR331W 99 GSVFNNK|DH 0.068 . YDR331W 115 SVEVDYR|GY 0.097 . YDR331W 126 TVENFIR|LL 0.091 . YDR331W 131 IRLLTDR|WT 0.127 . YDR331W 138 WTEDHPK|SK 0.072 . YDR331W 140 EDHPKSK|RL 0.070 . YDR331W 141 DHPKSKR|LL 0.175 . YDR331W 164 GGDDFLK|FQ 0.074 . YDR331W 186 FQQMYEK|KR 0.058 . YDR331W 187 QQMYEKK|RY 0.140 . YDR331W 188 QMYEKKR|YN 0.242 . YDR331W 207 ANTMYSK|FY 0.072 . YDR331W 241 GVAVIDR|FT 0.115 . YDR331W 255 FLEQIDK|NS 0.056 . YDR331W 272 DSFTFEK|IH 0.066 . YDR331W 280 HSHVGVR|TD 0.072 . YDR331W 286 RTDLFDR|NP 0.087 . YDR331W 309 VIPDDSK|PL 0.063 . YDR331W 320 SHYHHYK|DH 0.079 . YDR331W 343 LALETYR|KN 0.077 . YDR331W 344 ALETYRK|NN 0.066 . YDR331W 350 KNNQSSK|IE 0.070 . YDR331W 353 QSSKIEK|KI 0.088 . YDR331W 354 SSKIEKK|IK 0.124 . YDR331W 356 KIEKKIK|DI 0.070 . YDR331W 359 KKIKDIK|ST 0.089 . YDR331W 379 CFFTSFK|QS 0.063 . YDR331W 398 ILWFMLR|GN 0.087 . YDR331W 403 LRGNTAK|AT 0.084 . ____________________________^_________________

  • Fasta :-

    >YDR331W ATGCGTATAGCGATGCATCTGCCGCTGTTGCTTTTATACATATTCTTACTACCCCTTTCA GGTGCAAATAACACAGATGCTGCACACGAAGTTATAGCAACGAACACAAATAATTGGGCC GTATTAGTATCCACGTCGCGGTTCTGGTTCAATTACAGGCACATGGCTAATGTCCTTAGT ATGTATAGGACTGTAAAGAGGTTAGGTATACCGGATTCACAAATAATATTGATGCTGAGT GATGATGTGGCCTGCAATTCAAGGAATCTATTTCCTGGAAGTGTTTTTAACAATAAGGAT CACGCTATTGACCTTTACGGAGACTCTGTAGAGGTTGACTACAGAGGTTACGAAGTTACC GTGGAAAACTTTATAAGGCTGTTAACGGATAGATGGACAGAAGACCATCCTAAATCTAAA CGGTTGTTGACGGATGAAAATTCAAATATATTCATCTATATGACAGGACATGGTGGCGAT GATTTTTTAAAGTTCCAAGATGCTGAAGAGATTGCTTCTGAAGATATTGCAGATGCATTC CAGCAAATGTACGAAAAGAAAAGATACAATGAAATCTTCTTTATGATAGATACATGTCAG GCAAACACAATGTATTCCAAGTTTTATTCTCCAAATATTCTGGCTGTAGGCTCTAGTGAA ATGGATGAAAGCTCGTACTCGCATCACTCGGACGTAGAAATAGGGGTTGCTGTTATTGAT AGATTCACCTATTACTGTTTGGATTTCCTAGAACAAATCGATAAAAATTCCACGTTAACT TTGCAGGACCTCTTCGATTCATTCACCTTCGAAAAGATTCACTCTCATGTGGGTGTCAGG ACTGATCTGTTTGATAGGAATCCGTCAGAAGTATTGATTACTGATTTTTTTGCGAATGTG CAAAACGTAATTCCTGATGATTCAAAACCTCTTTCCGTAAGTCATTATCATCATTACAAA GATCATATCGATACTGCTCAGTATGAGCTTAACAATAATGTGCTGGATTTGGCCTTGGAG ACTTACCGCAAAAACAATCAATCCTCCAAGATTGAAAAAAAAATCAAAGACATCAAGTCT ACTAGTGTATTGGATGTTGATATAGATTCCAACGAATGTTTCTTCACCTCCTTCAAACAA TCAGCTACCATAATACTGGCGCTTATAGTAACTATTCTGTGGTTCATGCTGAGAGGAAAC ACTGCTAAAGCAACCTATGACCTGTACACTAATTAA
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  • Fasta :-

    MRIAMHLPLLLLYIFLLPLSGANNTDAAHEVIATNTNNWAVLVSTSRFWFNYRHMANVLS MYRTVKRLGIPDSQIILMLSDDVACNSRNLFPGSVFNNKDHAIDLYGDSVEVDYRGYEVT VENFIRLLTDRWTEDHPKSKRLLTDENSNIFIYMTGHGGDDFLKFQDAEEIASEDIADAF QQMYEKKRYNEIFFMIDTCQANTMYSKFYSPNILAVGSSEMDESSYSHHSDVEIGVAVID RFTYYCLDFLEQIDKNSTLTLQDLFDSFTFEKIHSHVGVRTDLFDRNPSEVLITDFFANV QNVIPDDSKPLSVSHYHHYKDHIDTAQYELNNNVLDLALETYRKNNQSSKIEKKIKDIKS TSVLDVDIDSNECFFTSFKQSATIILALIVTILWFMLRGNTAKATYDLYTN

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YDR331W349 SNNQSSKIEK0.991unspYDR331W362 SIKSTSVLDV0.992unsp

YDR331W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India