YER012W | proteasome core particle subunit beta 4

_IDPredictionOTHERSPmTPCS_Position
YER012WOTHER0.9926830.0021580.005158
No Results

  • Fasta :-

    >YER012W MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYI QANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQID YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVI VKIVDKDGIRQVDDFQAQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YER012W.fa Sequence name : YER012W Sequence length : 198 VALUES OF COMPUTED PARAMETERS Coef20 : 4.349 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.029 1.218 -0.015 0.462 MesoH : -1.193 0.003 -0.521 0.088 MuHd_075 : 18.244 15.339 5.086 3.784 MuHd_095 : 6.101 3.430 0.573 0.931 MuHd_100 : 6.456 1.543 1.539 1.947 MuHd_105 : 14.428 6.153 3.699 3.329 Hmax_075 : 17.267 23.800 4.536 6.907 Hmax_095 : 6.600 17.500 2.085 5.620 Hmax_100 : 9.400 17.500 2.085 5.620 Hmax_105 : 10.383 15.983 2.276 5.332 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9592 0.0408 DFMC : 0.9514 0.0486
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 198 YER012W MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAV 80 SSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDL 160 LKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ 240 ................................................................................ 80 ................................................................................ 160 ...................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YER012W 8 DIILGIR|VQ 0.068 . YER012W 19 VILASSK|AV 0.076 . YER012W 23 SSKAVTR|GI 0.128 . YER012W 29 RGISVLK|DS 0.088 . YER012W 34 LKDSDDK|TR 0.055 . YER012W 36 DSDDKTR|QL 0.124 . YER012W 70 IQLYSIR|ED 0.082 . YER012W 85 AVSSFVR|QE 0.080 . YER012W 90 VRQELAK|SI 0.099 . YER012W 93 ELAKSIR|SR 0.165 . YER012W 95 AKSIRSR|RP 0.113 . YER012W 96 KSIRSRR|PY 0.459 . YER012W 109 LIGGYDK|KK 0.057 . YER012W 110 IGGYDKK|KN 0.107 . YER012W 111 GGYDKKK|NK 0.084 . YER012W 113 YDKKKNK|PE 0.062 . YER012W 125 IDYLGTK|VE 0.055 . YER012W 149 LLDHHYR|PD 0.115 . YER012W 162 EGLDLLK|LC 0.053 . YER012W 170 CVQELEK|RM 0.053 . YER012W 171 VQELEKR|MP 0.117 . YER012W 177 RMPMDFK|GV 0.090 . YER012W 182 FKGVIVK|IV 0.083 . YER012W 186 IVKIVDK|DG 0.071 . YER012W 190 VDKDGIR|QV 0.121 . ____________________________^_________________

  • Fasta :-

    >YER012W ATGGATATTATTCTGGGCATCCGTGTACAGGATTCTGTCATTCTAGCGTCTTCTAAGGCA GTCACAAGAGGTATTTCTGTTTTAAAAGATTCTGATGATAAAACGAGACAATTATCGCCA CATACATTGATGAGTTTTGCCGGTGAAGCTGGTGACACCGTTCAATTCGCCGAGTACATT CAAGCCAATATCCAATTATACTCCATTAGAGAAGATTATGAGCTCTCTCCACAAGCAGTA TCTAGTTTTGTTAGGCAAGAATTAGCCAAGTCAATTAGGTCGAGAAGACCATACCAAGTC AACGTATTGATTGGAGGCTATGACAAAAAGAAGAACAAACCGGAACTATATCAAATTGAC TACTTGGGTACTAAAGTCGAATTACCCTATGGTGCTCATGGTTACTCGGGGTTTTACACA TTCTCTTTACTAGATCATCATTATAGACCTGATATGACTACTGAGGAGGGTTTAGATTTA TTAAAACTATGTGTACAAGAGCTTGAAAAAAGAATGCCAATGGACTTCAAGGGCGTCATT GTTAAAATCGTGGATAAAGATGGCATAAGACAAGTAGATGACTTCCAGGCACAGTGA
  • Download Fasta

  • Fasta :-

    MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYI QANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQID YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVI VKIVDKDGIRQVDDFQAQ

    No Results
No Results
No Results
IDSitePeptideScoreMethod
YER012W39 STRQLSPHTL0.992unsp

YER012W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India