YER078C | aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
YER078CmTP0.0137260.0000270.986247CS pos: 19-20. RYF-SK. Pr: 0.4710
No Results

  • Fasta :-

    >YER078C MLHRINPVRFSMQSCQRYFSKLVSPLEQHKSNTFTNRVRIPIEAGQPLHETRPFLIKSGE LTPGISALEYYERRIRLAETLPPKSCVILAGNDIQFASGAVFYPFQQENDLFYLSGWNEP NSVMILEKPTDSLSDTIFHMLVPPKDAFAEKWEGFRSGVYGVQEIFNADESASINDLSKY LPKIINRNDFIYFDMLSTSNPSSSNFKHIKSLLDGSGNSNRSLNSIANKTIKPISKRIAE FRKIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVV ATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAV LNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLG LDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNL TVEAVKEIDDLENVMQNGLSTKFEEDQVAPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YER078C.fa Sequence name : YER078C Sequence length : 511 VALUES OF COMPUTED PARAMETERS Coef20 : 4.482 CoefTot : -1.119 ChDiff : -6 ZoneTo : 42 KR : 7 DE : 1 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.329 0.104 0.524 MesoH : -0.612 0.089 -0.420 0.215 MuHd_075 : 29.155 13.974 8.596 5.287 MuHd_095 : 48.033 29.883 13.960 10.652 MuHd_100 : 40.340 29.910 12.541 9.748 MuHd_105 : 37.475 26.294 10.661 8.916 Hmax_075 : 15.400 8.633 3.667 2.998 Hmax_095 : 15.313 15.500 3.381 4.699 Hmax_100 : 18.200 18.200 4.565 5.250 Hmax_105 : 16.917 15.500 4.288 5.192 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1065 0.8935 DFMC : 0.2444 0.7556 This protein is probably imported in mitochondria. f(Ser) = 0.1190 f(Arg) = 0.1190 CMi = 0.50302 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 511 YER078C MLHRINPVRFSMQSCQRYFSKLVSPLEQHKSNTFTNRVRIPIEAGQPLHETRPFLIKSGELTPGISALEYYERRIRLAET 80 LPPKSCVILAGNDIQFASGAVFYPFQQENDLFYLSGWNEPNSVMILEKPTDSLSDTIFHMLVPPKDAFAEKWEGFRSGVY 160 GVQEIFNADESASINDLSKYLPKIINRNDFIYFDMLSTSNPSSSNFKHIKSLLDGSGNSNRSLNSIANKTIKPISKRIAE 240 FRKIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVVATGSNSLCIHYTRNDDVMFD 320 DEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAVLNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGID 400 KVSGWNVEKLYPHYIGHNLGLDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNL 480 TVEAVKEIDDLENVMQNGLSTKFEEDQVAPL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YER078C 4 ---MLHR|IN 0.078 . YER078C 9 HRINPVR|FS 0.128 . YER078C 17 SMQSCQR|YF 0.108 . YER078C 21 CQRYFSK|LV 0.109 . YER078C 30 SPLEQHK|SN 0.073 . YER078C 37 SNTFTNR|VR 0.112 . YER078C 39 TFTNRVR|IP 0.081 . YER078C 52 QPLHETR|PF 0.085 . YER078C 57 TRPFLIK|SG 0.083 . YER078C 73 ALEYYER|RI 0.088 . YER078C 74 LEYYERR|IR 0.096 . YER078C 76 YYERRIR|LA 0.205 . YER078C 84 AETLPPK|SC 0.063 . YER078C 128 SVMILEK|PT 0.068 . YER078C 145 HMLVPPK|DA 0.092 . YER078C 151 KDAFAEK|WE 0.065 . YER078C 156 EKWEGFR|SG 0.095 . YER078C 179 SINDLSK|YL 0.075 . YER078C 183 LSKYLPK|II 0.068 . YER078C 187 LPKIINR|ND 0.102 . YER078C 207 PSSSNFK|HI 0.083 . YER078C 210 SNFKHIK|SL 0.105 . YER078C 221 GSGNSNR|SL 0.152 . YER078C 229 LNSIANK|TI 0.077 . YER078C 232 IANKTIK|PI 0.089 . YER078C 236 TIKPISK|RI 0.065 . YER078C 237 IKPISKR|IA 0.179 . YER078C 242 KRIAEFR|KI 0.105 . YER078C 243 RIAEFRK|IK 0.136 . YER078C 245 AEFRKIK|SP 0.164 . YER078C 251 KSPQELR|IM 0.078 . YER078C 254 QELRIMR|RA 0.305 . YER078C 255 ELRIMRR|AG 0.158 . YER078C 262 AGQISGR|SF 0.164 . YER078C 270 FNQAFAK|RF 0.073 . YER078C 271 NQAFAKR|FR 0.153 . YER078C 273 AFAKRFR|NE 0.083 . YER078C 276 KRFRNER|TL 0.300 . YER078C 285 DSFLHYK|FI 0.081 . YER078C 293 ISGGCDK|DA 0.075 . YER078C 313 LCIHYTR|ND 0.094 . YER078C 341 YCADISR|TW 0.079 . YER078C 348 TWPNSGK|FT 0.096 . YER078C 354 KFTDAQR|DL 0.097 . YER078C 365 AVLNVQR|DC 0.083 . YER078C 369 VQRDCIK|LC 0.061 . YER078C 372 DCIKLCK|AS 0.058 . YER078C 385 LHDIHEK|SI 0.077 . YER078C 391 KSITLMK|QE 0.062 . YER078C 395 LMKQELK|NL 0.066 . YER078C 401 KNLGIDK|VS 0.064 . YER078C 409 SGWNVEK|LY 0.063 . YER078C 428 DVHDVPK|VS 0.064 . YER078C 431 DVPKVSR|YE 0.080 . YER078C 436 SRYEPLK|VG 0.062 . YER078C 460 SFPSYFR|NV 0.113 . YER078C 465 FRNVGIR|IE 0.120 . YER078C 486 LTVEAVK|EI 0.073 . YER078C 502 QNGLSTK|FE 0.078 . ____________________________^_________________

  • Fasta :-

    >YER078C ATGTTACATAGGATAAACCCAGTACGGTTTTCTATGCAATCTTGCCAAAGATACTTCTCG AAGTTGGTATCGCCATTGGAACAGCATAAAAGTAATACTTTTACTAATAGAGTCAGAATC CCCATTGAGGCAGGCCAACCACTGCATGAGACAAGGCCGTTCCTTATAAAGTCGGGCGAG TTGACACCAGGCATTTCAGCCTTGGAATACTATGAAAGAAGAATTAGGTTGGCGGAAACA TTGCCTCCCAAAAGTTGTGTGATTTTAGCTGGTAACGATATCCAATTTGCATCTGGAGCA GTATTTTATCCGTTCCAACAGGAAAATGACCTGTTTTATCTTAGTGGTTGGAATGAACCT AATTCGGTCATGATTTTAGAAAAGCCAACGGATAGTTTAAGTGATACAATTTTCCACATG CTGGTTCCGCCAAAGGATGCGTTTGCTGAAAAGTGGGAAGGATTTAGGTCTGGGGTTTAT GGTGTTCAAGAAATTTTCAATGCCGATGAATCTGCTTCCATTAACGATTTGTCTAAATAT TTGCCCAAAATAATTAACAGGAATGATTTCATCTATTTTGATATGCTATCAACTTCTAAT CCCAGTTCGTCCAATTTTAAACACATCAAGAGCCTGTTAGATGGCAGTGGGAATAGCAAT CGATCATTGAATTCCATTGCGAATAAGACCATCAAACCCATCAGTAAAAGAATTGCAGAG TTCCGTAAGATCAAGTCCCCTCAAGAGTTGAGAATTATGAGGAGAGCTGGCCAAATATCA GGAAGATCGTTCAATCAAGCCTTTGCTAAAAGATTTAGGAATGAGAGAACTTTAGATTCC TTTCTTCATTACAAGTTTATATCCGGTGGTTGCGATAAGGACGCATATATCCCCGTGGTC GCTACTGGTTCGAATTCTTTGTGTATCCATTACACAAGAAACGATGATGTGATGTTTGAC GACGAAATGGTTCTTGTAGACGCTGCTGGCTCCTTGGGTGGTTATTGTGCTGATATTTCG AGAACGTGGCCCAATAGTGGGAAATTCACTGATGCACAAAGAGATCTCTACGAAGCTGTA TTAAATGTTCAGCGTGATTGCATTAAGTTATGTAAAGCTAGCAATAACTATTCCCTCCAC GACATCCATGAAAAGAGTATCACACTCATGAAACAGGAATTGAAAAACTTGGGCATAGAT AAAGTCTCCGGTTGGAATGTTGAAAAATTGTATCCGCACTATATTGGACACAATTTAGGT CTAGATGTTCACGATGTGCCTAAAGTTTCCAGGTACGAACCATTAAAGGTTGGACAAGTT ATTACTATTGAACCGGGTTTATATATTCCTAACGAGGAATCATTTCCATCTTACTTTAGA AACGTCGGAATAAGAATTGAAGATGACATAGCCATTGGTGAAGATACTTACACTAATTTA ACTGTTGAAGCAGTGAAAGAAATTGACGATTTAGAAAATGTCATGCAAAATGGCTTATCT ACAAAATTCGAGGAGGACCAAGTGGCACCACTGTAA
  • Download Fasta

  • Fasta :-

    MLHRINPVRFSMQSCQRYFSKLVSPLEQHKSNTFTNRVRIPIEAGQPLHETRPFLIKSGE LTPGISALEYYERRIRLAETLPPKSCVILAGNDIQFASGAVFYPFQQENDLFYLSGWNEP NSVMILEKPTDSLSDTIFHMLVPPKDAFAEKWEGFRSGVYGVQEIFNADESASINDLSKY LPKIINRNDFIYFDMLSTSNPSSSNFKHIKSLLDGSGNSNRSLNSIANKTIKPISKRIAE FRKIKSPQELRIMRRAGQISGRSFNQAFAKRFRNERTLDSFLHYKFISGGCDKDAYIPVV ATGSNSLCIHYTRNDDVMFDDEMVLVDAAGSLGGYCADISRTWPNSGKFTDAQRDLYEAV LNVQRDCIKLCKASNNYSLHDIHEKSITLMKQELKNLGIDKVSGWNVEKLYPHYIGHNLG LDVHDVPKVSRYEPLKVGQVITIEPGLYIPNEESFPSYFRNVGIRIEDDIAIGEDTYTNL TVEAVKEIDDLENVMQNGLSTKFEEDQVAPL

  • title: active site
  • coordinates: H310,D327,D338,H417,E444,E467
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YER078C246 SRKIKSPQEL0.994unspYER078C246 SRKIKSPQEL0.994unspYER078C246 SRKIKSPQEL0.994unspYER078C346 STWPNSGKFT0.995unspYER078C430 SVPKVSRYEP0.991unspYER078C24 SSKLVSPLEQ0.992unspYER078C132 SKPTDSLSDT0.996unsp

YER078C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India