YER094C | proteasome core particle subunit beta 3

_IDPredictionOTHERSPmTPCS_Position
YER094COTHER0.9997430.0002370.000020
No Results

  • Fasta :-

    >YER094C MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDV TTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPF IAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDAL SGWGAVVYIIKKDEVVKRYLKMRQD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YER094C.fa Sequence name : YER094C Sequence length : 205 VALUES OF COMPUTED PARAMETERS Coef20 : 3.501 CoefTot : -1.011 ChDiff : -6 ZoneTo : 18 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 1.512 0.221 0.531 MesoH : -0.437 0.362 -0.305 0.264 MuHd_075 : 28.191 13.299 7.012 3.581 MuHd_095 : 16.425 3.999 3.486 1.257 MuHd_100 : 14.765 2.893 3.509 0.280 MuHd_105 : 5.248 2.716 2.662 1.535 Hmax_075 : 14.117 10.850 2.502 4.034 Hmax_095 : 11.375 9.300 1.380 3.830 Hmax_100 : 12.000 7.600 1.417 3.000 Hmax_105 : 10.967 7.233 1.494 3.710 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9964 0.0036 DFMC : 0.9939 0.0061
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 205 YER094C MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTLNEMFRYKTNLYKLKEER 80 AIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEP 160 EDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 240 ................................................................................ 80 ................................................................................ 160 ............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YER094C 18 VVAMTGK|DC 0.069 . YER094C 28 AIACDLR|LG 0.086 . YER094C 39 SLGVSNK|FE 0.067 . YER094C 42 VSNKFEK|IF 0.075 . YER094C 68 TLNEMFR|YK 0.100 . YER094C 70 NEMFRYK|TN 0.065 . YER094C 75 YKTNLYK|LK 0.059 . YER094C 77 TNLYKLK|EE 0.079 . YER094C 80 YKLKEER|AI 0.128 . YER094C 98 SSSLYER|RF 0.124 . YER094C 99 SSLYERR|FG 0.112 . YER094C 115 VAGINSK|SG 0.076 . YER094C 118 INSKSGK|PF 0.111 . YER094C 134 GCIDEAK|DF 0.078 . YER094C 177 LLNAADR|DA 0.129 . YER094C 191 AVVYIIK|KD 0.061 . YER094C 192 VVYIIKK|DE 0.077 . YER094C 197 KKDEVVK|RY 0.060 . YER094C 198 KDEVVKR|YL 0.248 . YER094C 201 VVKRYLK|MR 0.090 . YER094C 203 KRYLKMR|QD 0.131 . ____________________________^_________________

  • Fasta :-

    >YER094C ATGTCGGATCCAAGTTCTATTAACGGTGGTATCGTCGTTGCGATGACAGGTAAAGACTGT GTGGCCATTGCCTGTGATTTGCGTCTCGGAAGCCAGTCACTAGGTGTGTCGAACAAGTTT GAAAAAATCTTCCACTATGGGCATGTGTTCTTAGGGATTACCGGTCTGGCTACCGACGTG ACTACTCTGAACGAGATGTTCCGCTACAAGACGAACCTATATAAGTTGAAGGAAGAAAGG GCCATTGAGCCTGAAACGTTTACCCAATTAGTGTCAAGTTCACTTTATGAAAGAAGATTC GGTCCATACTTTGTGGGGCCGGTGGTAGCAGGTATTAATTCCAAGTCCGGGAAGCCCTTT ATTGCGGGATTCGACCTAATCGGCTGTATCGACGAGGCCAAGGATTTTATCGTTAGCGGT ACTGCATCCGACCAACTGTTCGGTATGTGTGAGTCCCTGTACGAACCTAATCTAGAGCCA GAAGATCTTTTCGAAACTATAAGTCAGGCCCTACTGAATGCTGCTGACCGTGACGCTCTA TCAGGCTGGGGAGCTGTAGTATACATCATCAAGAAGGATGAAGTGGTGAAGAGATACTTG AAGATGAGACAAGATTGA
  • Download Fasta

  • Fasta :-

    MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDV TTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPF IAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDAL SGWGAVVYIIKKDEVVKRYLKMRQD

  • title: active site
  • coordinates: G10,D26,R28,K42,T141,D178,S181,G182
No Results
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YER094C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India