_IDPredictionOTHERSPmTPCS_Position
YER143WOTHER0.9999820.0000160.000002
No Results
  • Fasta :-

    >YER143W MDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSL KELGLKTDDLLLIRGKISNSIQTDAATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLND LVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTRLMANPDDPDNKKRIAELLDQ QAIDEQLRNAIEYTPEMFTQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSR MIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSFTVLDTDIDVLIGLDMLKRHLAC VDLKENVLRIAEVETSFLSEAEIPKSFQEGLPAPTSVTTSSDKPLTPTKTSSTLPPQPGA VPALAPRTGMGPTPTGRSTAGATTATGRTFPEQTIKQLMDLGFPRDAVVKALKQTNGNAE FAASLLFQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YER143W.fa Sequence name : YER143W Sequence length : 428 VALUES OF COMPUTED PARAMETERS Coef20 : 3.246 CoefTot : 0.000 ChDiff : -12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.735 1.265 0.021 0.472 MesoH : -0.277 0.307 -0.348 0.151 MuHd_075 : 27.684 11.238 7.308 2.916 MuHd_095 : 13.169 18.163 4.564 4.104 MuHd_100 : 13.644 15.592 4.997 3.214 MuHd_105 : 21.623 13.711 6.239 2.718 Hmax_075 : 12.600 9.100 1.658 4.468 Hmax_095 : 7.087 12.425 1.021 4.357 Hmax_100 : 5.300 11.600 0.683 4.340 Hmax_105 : 13.400 13.500 2.535 4.890 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9510 0.0490 DFMC : 0.9647 0.0353
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 428 YER143W MDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSLKELGLKTDDLLLIRGKISNS 80 IQTDAATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLNDLVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTR 160 LMANPDDPDNKKRIAELLDQQAIDEQLRNAIEYTPEMFTQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSR 240 MIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSFTVLDTDIDVLIGLDMLKRHLACVDLKENVLRIAEVETSFLSE 320 AEIPKSFQEGLPAPTSVTTSSDKPLTPTKTSSTLPPQPGAVPALAPRTGMGPTPTGRSTAGATTATGRTFPEQTIKQLMD 400 LGFPRDAVVKALKQTNGNAEFAASLLFQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YER143W 40 ADCGFDK|TK 0.062 . YER143W 42 CGFDKTK|HD 0.065 . YER143W 56 DILDSNR|TQ 0.078 . YER143W 61 NRTQSLK|EL 0.072 . YER143W 66 LKELGLK|TD 0.056 . YER143W 74 DDLLLIR|GK 0.067 . YER143W 76 LLLIRGK|IS 0.064 . YER143W 98 AFIEQFR|QE 0.067 . YER143W 108 LNNQMLR|SQ 0.115 . YER143W 129 NDPLLFR|ER 0.060 . YER143W 131 PLLFRER|LG 0.066 . YER143W 139 GPLILQR|RY 0.105 . YER143W 140 PLILQRR|YG 0.144 . YER143W 160 PQDEYTR|LM 0.059 . YER143W 171 PDDPDNK|KR 0.060 . YER143W 172 DDPDNKK|RI 0.093 . YER143W 173 DPDNKKR|IA 0.275 . YER143W 188 AIDEQLR|NA 0.091 . YER143W 216 INNYPVK|AF 0.075 . YER143W 231 TTIMSTR|LA 0.119 . YER143W 234 MSTRLAK|KT 0.168 . YER143W 235 STRLAKK|TG 0.074 . YER143W 240 KKTGLSR|MI 0.097 . YER143W 244 LSRMIDK|RF 0.069 . YER143W 245 SRMIDKR|FI 0.474 . YER143W 251 RFIGEAR|GV 0.220 . YER143W 257 RGVGTGK|II 0.082 . YER143W 261 TGKIIGR|IH 0.100 . YER143W 268 IHQAQVK|IE 0.069 . YER143W 295 IGLDMLK|RH 0.054 . YER143W 296 GLDMLKR|HL 0.136 . YER143W 304 LACVDLK|EN 0.056 . YER143W 309 LKENVLR|IA 0.124 . YER143W 325 SEAEIPK|SF 0.107 . YER143W 343 VTTSSDK|PL 0.061 . YER143W 349 KPLTPTK|TS 0.069 . YER143W 367 VPALAPR|TG 0.083 . YER143W 377 GPTPTGR|ST 0.153 . YER143W 388 ATTATGR|TF 0.073 . YER143W 396 FPEQTIK|QL 0.067 . YER143W 405 MDLGFPR|DA 0.111 . YER143W 410 PRDAVVK|AL 0.070 . YER143W 413 AVVKALK|QT 0.060 . ____________________________^_________________
  • Fasta :-

    >YER143W ATGGATTTAACAATTTCAAACGAACTTACTGGCGAGATATACGGCCCAATTGAAGTCAGT GAAGATATGGCTTTAACTGATCTAATAGCATTACTGCAGGCCGATTGCGGGTTTGACAAA ACAAAACACGACTTATATTACAATATGGACATTCTAGACTCAAACAGAACTCAGTCTTTA AAAGAACTAGGGCTCAAAACCGATGACTTATTATTGATTAGGGGTAAGATTTCCAATTCC ATTCAAACAGATGCTGCTACTTTGTCCGACGAAGCGTTCATAGAGCAATTTAGACAAGAG CTACTTAATAATCAAATGCTTAGATCACAACTCATTTTGCAAATCCCTGGATTGAATGAT TTAGTAAATGACCCACTGTTGTTTAGGGAAAGATTGGGCCCGCTCATATTACAAAGACGT TATGGTGGCTATAACACCGCCATGAATCCTTTTGGCATCCCCCAAGATGAATATACTAGA CTAATGGCCAACCCCGATGATCCTGACAACAAGAAGAGGATTGCAGAGCTTTTAGACCAA CAAGCTATCGATGAACAGTTGCGCAATGCTATCGAATATACACCTGAAATGTTTACCCAG GTCCCTATGCTTTACATTAATATCGAAATAAATAACTACCCCGTAAAGGCATTTGTAGAT ACAGGGGCTCAAACAACGATTATGTCCACCAGGTTAGCGAAGAAAACTGGCCTGTCGAGA ATGATTGACAAGAGATTTATTGGAGAAGCTCGTGGCGTAGGAACCGGCAAAATTATTGGG AGAATTCACCAAGCCCAAGTCAAAATAGAAACACAATATATTCCATGCAGTTTTACCGTC TTAGATACTGACATCGATGTTTTGATAGGACTAGACATGCTGAAAAGGCATTTGGCTTGT GTGGACTTAAAGGAAAACGTTCTTAGGATAGCAGAAGTGGAGACAAGCTTTTTGAGTGAA GCGGAAATCCCAAAAAGTTTTCAAGAAGGACTTCCAGCACCAACGTCAGTTACAACTTCG TCTGATAAGCCCCTAACACCCACCAAGACTAGTTCAACTCTACCACCACAACCGGGGGCT GTTCCTGCGCTTGCTCCAAGGACTGGTATGGGGCCAACACCTACGGGAAGAAGTACAGCC GGTGCTACAACGGCAACCGGGAGAACGTTTCCCGAACAAACGATTAAACAGCTTATGGAT CTAGGTTTCCCTAGGGATGCTGTGGTAAAGGCTCTTAAACAGACTAACGGAAATGCAGAA TTTGCTGCATCCCTCCTTTTCCAATGA
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  • Fasta :-

    MDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSL KELGLKTDDLLLIRGKISNSIQTDAATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLND LVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTRLMANPDDPDNKKRIAELLDQ QAIDEQLRNAIEYTPEMFTQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSR MIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSFTVLDTDIDVLIGLDMLKRHLAC VDLKENVLRIAEVETSFLSEAEIPKSFQEGLPAPTSVTTSSDKPLTPTKTSSTLPPQPGA VPALAPRTGMGPTPTGRSTAGATTATGRTFPEQTIKQLMDLGFPRDAVVKALKQTNGNAE FAASLLFQ

  • title: catalytic motif
  • coordinates: D220,T221,G222
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YER143WT3480.7480.315YER143WT3460.7340.070YER143WT3500.7220.071YER143WT3530.7050.486YER143WT3680.6870.027YER143WT3380.6790.472YER143WT3390.6670.048YER143WT3730.6570.347YER143WT3750.6470.558YER143WT3790.6460.050YER143WT3350.6300.492YER143WS3510.6270.073YER143WS3410.6140.097YER143WS3520.6000.027YER143WT3830.5830.129YER143WS3400.5730.043YER143WT3840.5700.060YER143WS3360.5490.063YER143WT3860.5330.092YER143WS3780.5280.021
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YER143WT3480.7480.315YER143WT3460.7340.070YER143WT3500.7220.071YER143WT3530.7050.486YER143WT3680.6870.027YER143WT3380.6790.472YER143WT3390.6670.048YER143WT3730.6570.347YER143WT3750.6470.558YER143WT3790.6460.050YER143WT3350.6300.492YER143WS3510.6270.073YER143WS3410.6140.097YER143WS3520.6000.027YER143WT3830.5830.129YER143WS3400.5730.043YER143WT3840.5700.060YER143WS3360.5490.063YER143WT3860.5330.092YER143WS3780.5280.021
IDSitePeptideScoreMethod
YER143W59 SNRTQSLKEL0.997unsp

YER143W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India