YFL060C | putative pyridoxal 5'-phosphate synthase

_IDPredictionOTHERSPmTPCS_Position
YFL060COTHER0.8582710.1409120.000817
No Results

  • Fasta :-

    >YFL060C MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGES TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGLIYISQQLSNEAKLVKTLNLLKVKVKR NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE LIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKNYSK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YFL060C.fa Sequence name : YFL060C Sequence length : 222 VALUES OF COMPUTED PARAMETERS Coef20 : 3.977 CoefTot : -0.129 ChDiff : 0 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.047 1.653 0.085 0.633 MesoH : -0.561 0.232 -0.380 0.195 MuHd_075 : 19.770 21.332 7.025 4.947 MuHd_095 : 8.840 10.751 3.094 1.979 MuHd_100 : 10.255 14.497 3.333 2.900 MuHd_105 : 12.538 13.455 3.087 2.987 Hmax_075 : 20.650 25.200 4.643 7.957 Hmax_095 : 13.300 21.600 2.664 6.150 Hmax_100 : 13.300 20.600 2.468 6.150 Hmax_105 : 16.200 19.338 3.045 6.067 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9660 0.0340 DFMC : 0.9799 0.0201
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 222 YFL060C MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGESTAMSLIAERTGFYDDLYAFV 80 HNPSKVTWGTCAGLIYISQQLSNEAKLVKTLNLLKVKVKRNAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVL 160 DPEHVQVLYKLDGKDNGGQELIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKNYSK 240 ................................................................................ 80 ................................................................................ 160 .............................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YFL060C 19 AFIEHVR|HV 0.137 . YFL060C 23 HVRHVEK|CI 0.071 . YFL060C 29 KCIVENR|DF 0.106 . YFL060C 34 NRDFYEK|KL 0.062 . YFL060C 35 RDFYEKK|LS 0.094 . YFL060C 42 LSVMTVK|DK 0.071 . YFL060C 44 VMTVKDK|NQ 0.060 . YFL060C 69 MSLIAER|TG 0.066 . YFL060C 85 FVHNPSK|VT 0.059 . YFL060C 106 QLSNEAK|LV 0.084 . YFL060C 109 NEAKLVK|TL 0.058 . YFL060C 115 KTLNLLK|VK 0.050 . YFL060C 117 LNLLKVK|VK 0.060 . YFL060C 119 LLKVKVK|RN 0.067 . YFL060C 120 LKVKVKR|NA 0.303 . YFL060C 125 KRNAFGR|QA 0.175 . YFL060C 132 QAQSSTR|IC 0.089 . YFL060C 152 FPATFIR|AP 0.106 . YFL060C 170 HVQVLYK|LD 0.069 . YFL060C 174 LYKLDGK|DN 0.081 . YFL060C 186 ELIVAAK|QK 0.073 . YFL060C 188 IVAAKQK|NN 0.069 . YFL060C 206 LAENDIR|FH 0.104 . YFL060C 213 FHDWFIR|EF 0.071 . YFL060C 218 IREFVLK|NY 0.085 . YFL060C 222 VLKNYSK|-- 0.065 . ____________________________^_________________

  • Fasta :-

    >YFL060C ATGACCGTCGTTATCGGAGTCTTGGCATTACAGGGTGCGTTCATTGAACATGTGCGACAC GTAGAAAAATGCATCGTCGAAAACAGGGATTTCTATGAAAAAAAACTATCTGTGATGACA GTGAAGGATAAAAATCAACTAGCTCAATGTGATGCATTGATCATACCTGGGGGAGAGTCG ACTGCAATGTCCCTTATTGCAGAAAGAACAGGATTTTACGACGATCTCTACGCATTCGTA CACAACCCAAGCAAGGTAACCTGGGGTACTTGTGCAGGTTTGATTTATATTTCACAACAA TTATCTAACGAAGCAAAACTGGTCAAGACGCTGAATTTACTAAAGGTTAAAGTAAAAAGA AATGCATTTGGGAGACAAGCTCAGTCTTCTACCCGGATTTGCGACTTTTCAAACTTTATT CCTCACTGCAATGATTTTCCTGCTACTTTTATAAGAGCCCCAGTAATAGAAGAGGTGCTG GATCCTGAACATGTGCAGGTCCTGTACAAATTAGATGGGAAGGATAATGGTGGTCAAGAA CTAATTGTTGCCGCTAAGCAAAAAAACAATATTCTTGCGACATCATTTCATCCGGAATTG GCAGAAAACGATATACGGTTTCACGACTGGTTCATCAGAGAATTTGTTCTTAAAAACTAC AGTAAATAA
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  • Fasta :-

    MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGES TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGLIYISQQLSNEAKLVKTLNLLKVKVKR NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE LIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKNYSK

  • title: catalytic triad
  • coordinates: C91,H197,E199
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YFL060C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India