YFR018C | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
YFR018CSP0.0590780.9404910.000431CS pos: 28-29. VTG-WE. Pr: 0.9792
No Results

  • Fasta :-

    >YFR018C MGMKYVLPLRLIGLAYLLVLFQVHRVTGWELSYEQYHAAHLNEAINPDSGWNKSTKNLLL PFNRTRVPGSEGSREIQRFIIEHFNNTLAGEWAVETQAFEENGYRFNNLVMTLQNNASEY LVLAAHYDTKIAPTGMVGAIDSAASCAALLYTAQFLTHIACHERTKEYNDLESNTVVSNS TLGVKIVFFDGEEAIEEWGPEDSIYGARRLAAQWLADGTMTRIRLLFLLDLLGSGEEEPL VPSYYAETHQEYQLLNRIEDDLLFRRGDEINGESALAAEVARQRKHLDPTDYRFLGLGHS VIGDDHTPFLAAGVPVLHAIPLPFPSTWHTVDDDFRHLDAAETRHWALLVCEFVVQSLRS RNQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YFR018C.fa Sequence name : YFR018C Sequence length : 363 VALUES OF COMPUTED PARAMETERS Coef20 : 4.163 CoefTot : -0.559 ChDiff : -20 ZoneTo : 29 KR : 3 DE : 0 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.535 2.059 0.230 0.691 MesoH : -0.319 0.314 -0.339 0.249 MuHd_075 : 23.791 11.891 5.583 5.333 MuHd_095 : 26.668 15.983 6.540 6.247 MuHd_100 : 23.616 15.149 6.668 6.054 MuHd_105 : 13.874 8.702 4.016 3.522 Hmax_075 : 15.167 18.400 4.050 6.540 Hmax_095 : 14.000 19.512 3.111 5.950 Hmax_100 : 15.800 23.400 3.994 7.160 Hmax_105 : 14.000 15.662 1.596 5.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9217 0.0783 DFMC : 0.9188 0.0812
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 363 YFR018C MGMKYVLPLRLIGLAYLLVLFQVHRVTGWELSYEQYHAAHLNEAINPDSGWNKSTKNLLLPFNRTRVPGSEGSREIQRFI 80 IEHFNNTLAGEWAVETQAFEENGYRFNNLVMTLQNNASEYLVLAAHYDTKIAPTGMVGAIDSAASCAALLYTAQFLTHIA 160 CHERTKEYNDLESNTVVSNSTLGVKIVFFDGEEAIEEWGPEDSIYGARRLAAQWLADGTMTRIRLLFLLDLLGSGEEEPL 240 VPSYYAETHQEYQLLNRIEDDLLFRRGDEINGESALAAEVARQRKHLDPTDYRFLGLGHSVIGDDHTPFLAAGVPVLHAI 320 PLPFPSTWHTVDDDFRHLDAAETRHWALLVCEFVVQSLRSRNQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YFR018C 4 ---MGMK|YV 0.071 . YFR018C 10 KYVLPLR|LI 0.078 . YFR018C 25 VLFQVHR|VT 0.102 . YFR018C 53 PDSGWNK|ST 0.093 . YFR018C 56 GWNKSTK|NL 0.067 . YFR018C 64 LLLPFNR|TR 0.074 . YFR018C 66 LPFNRTR|VP 0.095 . YFR018C 74 PGSEGSR|EI 0.083 . YFR018C 78 GSREIQR|FI 0.138 . YFR018C 105 FEENGYR|FN 0.083 . YFR018C 130 AAHYDTK|IA 0.080 . YFR018C 164 HIACHER|TK 0.089 . YFR018C 166 ACHERTK|EY 0.072 . YFR018C 185 NSTLGVK|IV 0.066 . YFR018C 208 DSIYGAR|RL 0.085 . YFR018C 209 SIYGARR|LA 0.188 . YFR018C 222 ADGTMTR|IR 0.069 . YFR018C 224 GTMTRIR|LL 0.075 . YFR018C 257 EYQLLNR|IE 0.080 . YFR018C 265 EDDLLFR|RG 0.072 . YFR018C 266 DDLLFRR|GD 0.131 . YFR018C 282 LAAEVAR|QR 0.098 . YFR018C 284 AEVARQR|KH 0.067 . YFR018C 285 EVARQRK|HL 0.316 . YFR018C 293 LDPTDYR|FL 0.104 . YFR018C 336 TVDDDFR|HL 0.124 . YFR018C 344 LDAAETR|HW 0.088 . YFR018C 359 FVVQSLR|SR 0.095 . YFR018C 361 VQSLRSR|NQ 0.087 . ____________________________^_________________

  • Fasta :-

    >YFR018C ATGGGAATGAAGTACGTATTGCCTTTGCGACTAATTGGTCTAGCGTACCTGTTGGTGCTA TTTCAGGTGCATAGGGTAACTGGGTGGGAGTTGTCATATGAGCAGTACCATGCAGCGCAT CTGAACGAAGCTATCAACCCAGACAGCGGTTGGAACAAAAGTACCAAGAACCTGCTGTTG CCTTTTAACAGAACGCGCGTACCCGGATCGGAAGGCTCGCGCGAGATCCAGCGCTTCATC ATCGAGCACTTCAACAATACGCTGGCGGGAGAATGGGCCGTTGAGACGCAAGCCTTTGAG GAGAACGGTTACCGCTTCAATAACCTTGTTATGACATTACAAAACAATGCGAGCGAGTAC TTAGTGCTCGCTGCTCATTATGATACCAAGATAGCGCCCACGGGGATGGTGGGCGCTATC GACAGTGCCGCCTCGTGTGCCGCGCTGCTATATACGGCCCAGTTCCTAACGCACATCGCG TGCCACGAGCGCACGAAAGAGTACAATGACTTAGAGTCGAACACTGTAGTATCGAATTCT ACCTTGGGTGTAAAGATCGTATTCTTTGATGGAGAGGAGGCCATTGAAGAGTGGGGCCCC GAGGACTCGATTTATGGAGCACGCCGATTAGCCGCCCAATGGCTTGCTGACGGCACGATG ACAAGAATTCGCCTATTATTTCTTCTGGATCTTTTAGGAAGTGGCGAAGAGGAGCCGCTA GTGCCCAGCTACTATGCAGAGACACATCAAGAATATCAGCTGCTCAATCGAATAGAGGAT GACTTGTTATTTCGACGTGGAGATGAAATCAACGGCGAATCGGCATTAGCCGCCGAAGTC GCGCGTCAACGCAAACATCTGGACCCCACGGACTATCGATTTTTAGGGCTCGGGCATTCG GTCATCGGAGACGACCACACGCCATTCCTGGCCGCCGGAGTACCCGTATTACATGCAATC CCGCTACCATTCCCAAGTACATGGCACACCGTGGATGATGACTTCCGGCACTTAGACGCC GCGGAGACTCGTCACTGGGCGCTGCTTGTGTGCGAATTTGTAGTACAGTCACTACGCTCC CGTAACCAGTGA
  • Download Fasta

  • Fasta :-

    MGMKYVLPLRLIGLAYLLVLFQVHRVTGWELSYEQYHAAHLNEAINPDSGWNKSTKNLLL PFNRTRVPGSEGSREIQRFIIEHFNNTLAGEWAVETQAFEENGYRFNNLVMTLQNNASEY LVLAAHYDTKIAPTGMVGAIDSAASCAALLYTAQFLTHIACHERTKEYNDLESNTVVSNS TLGVKIVFFDGEEAIEEWGPEDSIYGARRLAAQWLADGTMTRIRLLFLLDLLGSGEEEPL VPSYYAETHQEYQLLNRIEDDLLFRRGDEINGESALAAEVARQRKHLDPTDYRFLGLGHS VIGDDHTPFLAAGVPVLHAIPLPFPSTWHTVDDDFRHLDAAETRHWALLVCEFVVQSLRS RNQ

  • title: metal binding site
  • coordinates: D141,E193,H329
No Results
No Results
No Results

YFR018C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India