YFR050C | proteasome core particle subunit beta 7

_IDPredictionOTHERSPmTPCS_Position
YFR050COTHER0.9998280.0000890.000084
No Results

  • Fasta :-

    >YFR050C MNHDPFSWGRPADSTYGAYNTQIANAGASPMVNTQQPIVTGTSVISMKYDNGVIIAADNL GSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEAL EPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFG AHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKNTGLT FKKNLQVENMKWDFAKDIKGYGTQKI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YFR050C.fa Sequence name : YFR050C Sequence length : 266 VALUES OF COMPUTED PARAMETERS Coef20 : 3.040 CoefTot : -0.373 ChDiff : -3 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.459 0.929 0.159 0.479 MesoH : -0.310 0.290 -0.297 0.228 MuHd_075 : 15.064 5.401 3.392 2.569 MuHd_095 : 12.160 4.106 2.487 3.468 MuHd_100 : 18.792 7.084 3.730 4.076 MuHd_105 : 23.528 8.607 4.448 4.517 Hmax_075 : 4.025 -0.963 -1.710 2.065 Hmax_095 : -1.050 -3.850 -2.880 2.196 Hmax_100 : 8.200 -1.200 -1.232 2.880 Hmax_105 : 4.100 -2.567 -2.299 2.217 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9592 0.0408 DFMC : 0.8892 0.1108
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 266 YFR050C MNHDPFSWGRPADSTYGAYNTQIANAGASPMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGD 80 NTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFL 160 RYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKNTGLT 240 FKKNLQVENMKWDFAKDIKGYGTQKI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YFR050C 10 DPFSWGR|PA 0.107 . YFR050C 48 TSVISMK|YD 0.083 . YFR050C 68 SYGSLLR|FN 0.095 . YFR050C 74 RFNGVER|LI 0.100 . YFR050C 98 DMQHIER|LL 0.084 . YFR050C 101 HIERLLK|DL 0.122 . YFR050C 136 ATVMYQR|RS 0.068 . YFR050C 137 TVMYQRR|SK 0.230 . YFR050C 139 MYQRRSK|MN 0.099 . YFR050C 161 NGDQFLR|YV 0.120 . YFR050C 189 MANPLLR|KV 0.168 . YFR050C 190 ANPLLRK|VV 0.093 . YFR050C 194 LRKVVDR|ES 0.132 . YFR050C 200 RESDIPK|TT 0.079 . YFR050C 215 AIVNAMR|VL 0.074 . YFR050C 220 MRVLYYR|DA 0.162 . YFR050C 223 LYYRDAR|SS 0.300 . YFR050C 226 RDARSSR|NF 0.302 . YFR050C 235 SLAIIDK|NT 0.068 . YFR050C 242 NTGLTFK|KN 0.070 . YFR050C 243 TGLTFKK|NL 0.093 . YFR050C 251 LQVENMK|WD 0.064 . YFR050C 256 MKWDFAK|DI 0.128 . YFR050C 259 DFAKDIK|GY 0.078 . YFR050C 265 KGYGTQK|I- 0.062 . ____________________________^_________________

  • Fasta :-

    >YFR050C ATGAATCACGATCCTTTCAGTTGGGGCAGGCCCGCAGACTCTACTTATGGTGCTTACAAT ACACAAATTGCGAACGCAGGCGCCTCTCCCATGGTTAATACACAGCAACCAATAGTAACA GGTACTTCCGTCATATCAATGAAATATGATAATGGGGTTATCATTGCAGCAGATAATTTA GGTTCATATGGCTCTCTTCTAAGATTCAATGGCGTGGAGAGGCTTATTCCCGTGGGTGAT AACACCGTTGTGGGCATTTCAGGTGATATTTCTGATATGCAACACATTGAGAGATTATTG AAAGATCTAGTCACTGAAAATGCGTATGACAATCCTCTAGCGGATGCTGAAGAAGCGCTC GAACCCAGCTATATTTTTGAATATCTAGCTACCGTCATGTACCAGCGAAGATCAAAGATG AATCCACTTTGGAATGCCATCATTGTTGCTGGTGTACAGTCTAATGGTGATCAATTCCTA AGATACGTAAATCTTCTAGGTGTTACGTATTCGTCTCCCACCTTGGCCACAGGTTTTGGG GCACACATGGCAAACCCACTGTTAAGGAAAGTTGTAGATCGAGAATCTGATATTCCAAAG ACCACTGTACAGGTTGCTGAAGAGGCGATCGTAAATGCAATGAGAGTTCTTTATTATAGA GATGCCCGTTCTTCTAGAAACTTCTCACTGGCCATAATTGATAAGAACACAGGTTTAACT TTCAAGAAAAACTTGCAAGTTGAAAACATGAAATGGGACTTCGCCAAGGATATTAAAGGC TACGGTACTCAAAAAATTTAG
  • Download Fasta

  • Fasta :-

    MNHDPFSWGRPADSTYGAYNTQIANAGASPMVNTQQPIVTGTSVISMKYDNGVIIAADNL GSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEAL EPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFG AHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKNTGLT FKKNLQVENMKWDFAKDIKGYGTQKI

  • title: active site
  • coordinates: T42,D58,L60,R74,F179,D221,S224,S225
No Results
No Results
No Results

YFR050C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India