YGL011C | proteasome core particle subunit alpha 1

_IDPredictionOTHERSPmTPCS_Position
YGL011COTHER0.9991820.0005210.000298
No Results

  • Fasta :-

    >YGL011C MSGAAAASAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVP DKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKR MANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITT NLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAEN IEERLVAIAEQD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YGL011C.fa Sequence name : YGL011C Sequence length : 252 VALUES OF COMPUTED PARAMETERS Coef20 : 4.209 CoefTot : 0.413 ChDiff : -3 ZoneTo : 12 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.376 0.234 0.469 MesoH : -0.926 0.147 -0.423 0.105 MuHd_075 : 19.053 5.774 3.575 3.335 MuHd_095 : 12.350 4.222 1.832 2.511 MuHd_100 : 12.821 4.117 1.518 2.495 MuHd_105 : 10.758 2.793 1.315 2.191 Hmax_075 : 10.325 8.400 1.077 3.316 Hmax_095 : 11.200 9.700 1.403 3.980 Hmax_100 : 10.200 7.100 1.017 3.180 Hmax_105 : 9.100 9.100 1.478 3.897 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9754 0.0246 DFMC : 0.9540 0.0460
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 252 YGL011C MSGAAAASAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIG 80 MVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPA 160 GYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAEN 240 IEERLVAIAEQD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YGL011C 14 SAAGYDR|HI 0.098 . YGL011C 24 IFSPEGR|LY 0.090 . YGL011C 33 QVEYAFK|AT 0.063 . YGL011C 46 INSLAVR|GK 0.114 . YGL011C 48 SLAVRGK|DC 0.099 . YGL011C 57 TVVISQK|KV 0.078 . YGL011C 58 VVISQKK|VP 0.083 . YGL011C 62 QKKVPDK|LL 0.073 . YGL011C 77 YIFCISR|TI 0.104 . YGL011C 91 GPIPDAR|NA 0.096 . YGL011C 96 ARNAALR|AK 0.106 . YGL011C 98 NAALRAK|AE 0.070 . YGL011C 105 AEAAEFR|YK 0.103 . YGL011C 107 AAEFRYK|YG 0.072 . YGL011C 119 PCDVLAK|RM 0.053 . YGL011C 120 CDVLAKR|MA 0.161 . YGL011C 131 SQIYTQR|AY 0.102 . YGL011C 135 TQRAYMR|PL 0.186 . YGL011C 156 LGPSIYK|TD 0.057 . YGL011C 167 GYYVGYK|AT 0.075 . YGL011C 174 ATATGPK|QQ 0.065 . YGL011C 187 NLENHFK|KS 0.059 . YGL011C 188 LENHFKK|SK 0.275 . YGL011C 190 NHFKKSK|ID 0.072 . YGL011C 201 NEESWEK|VV 0.080 . YGL011C 220 LGTEFSK|ND 0.057 . YGL011C 230 EVGVATK|DK 0.067 . YGL011C 232 GVATKDK|FF 0.071 . YGL011C 244 AENIEER|LV 0.132 . ____________________________^_________________

  • Fasta :-

    >YGL011C ATGTCGGGTGCTGCTGCTGCATCTGCTGCTGGTTATGACAGGCACATCACTATCTTTTCC CCCGAGGGTCGTTTATATCAAGTAGAATATGCCTTTAAAGCGACTAATCAAACTAACATA AACTCACTAGCGGTCAGAGGTAAAGATTGTACAGTGGTGATAAGTCAGAAAAAGGTCCCT GATAAACTGTTGGATCCAACTACTGTTTCGTATATTTTTTGTATTTCAAGAACAATTGGT ATGGTAGTGAACGGACCAATACCGGATGCAAGAAATGCGGCCCTAAGAGCCAAGGCTGAG GCTGCAGAATTCCGTTATAAATATGGTTATGATATGCCATGCGATGTATTGGCTAAGAGA ATGGCTAACCTTTCCCAAATCTATACTCAAAGAGCATATATGAGACCATTAGGTGTTATA CTCACATTTGTTTCGGTAGATGAAGAATTGGGTCCCTCCATTTACAAAACTGACCCTGCA GGTTATTACGTTGGCTACAAAGCTACTGCGACAGGACCAAAACAACAGGAGATCACAACA AACTTAGAAAACCATTTCAAAAAGAGTAAAATCGACCATATTAATGAAGAATCATGGGAG AAGGTGGTAGAATTTGCTATTACTCATATGATTGACGCACTGGGTACCGAATTTTCAAAG AATGACTTGGAAGTCGGTGTCGCTACAAAGGACAAATTCTTTACCTTGAGTGCTGAGAAC ATCGAAGAAAGGCTAGTAGCAATTGCTGAACAAGATTAA
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  • Fasta :-

    MSGAAAASAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVP DKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKR MANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITT NLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAEN IEERLVAIAEQD

    No Results
  • title: active site
  • coordinates: I40,Q56,K58,Y71,P173
No Results
No Results
IDSitePeptideScoreMethod
YGL011C189 SHFKKSKIDH0.99unsp

YGL011C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India