YGL259W | Yps5p

_IDPredictionOTHERSPmTPCS_Position
YGL259WSP0.0009290.9990270.000044CS pos: 21-22. VLG-SS. Pr: 0.4260
No Results

  • Fasta :-

    >YGL259W MQLFSILSLLSSLMCSLTVLGSSASSYVKFPVQKFADIINIGTQDVSTVFKRNEVLNTTV INGIGVYVVKMEIGTPPQTVYLQLDTGSSDMIVNNADIAYCKSMSDGSDYASTDNYELTA TFTGPRSTTTSPELITLSALIGVNSMQETHLLLRITRLSSMTYTY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YGL259W.fa Sequence name : YGL259W Sequence length : 165 VALUES OF COMPUTED PARAMETERS Coef20 : 5.072 CoefTot : 0.948 ChDiff : -4 ZoneTo : 36 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.106 2.000 0.419 0.605 MesoH : 0.062 0.686 -0.199 0.290 MuHd_075 : 17.340 15.547 5.506 3.698 MuHd_095 : 19.966 18.941 6.415 6.405 MuHd_100 : 14.871 15.988 5.217 5.384 MuHd_105 : 14.777 20.835 4.453 6.223 Hmax_075 : 9.917 18.375 0.608 5.049 Hmax_095 : 14.438 15.600 2.684 5.547 Hmax_100 : 13.200 23.100 2.664 7.380 Hmax_105 : 14.700 23.188 1.557 6.842 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5290 0.4710 DFMC : 0.3962 0.6038 This protein is probably imported in chloroplast. f(Ser) = 0.2500 f(Arg) = 0.0000 CMi = 3.57143 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 165 YGL259W MQLFSILSLLSSLMCSLTVLGSSASSYVKFPVQKFADIINIGTQDVSTVFKRNEVLNTTVINGIGVYVVKMEIGTPPQTV 80 YLQLDTGSSDMIVNNADIAYCKSMSDGSDYASTDNYELTATFTGPRSTTTSPELITLSALIGVNSMQETHLLLRITRLSS 160 MTYTY 240 ................................................................................ 80 ................................................................................ 160 ..... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YGL259W 29 SASSYVK|FP 0.073 . YGL259W 34 VKFPVQK|FA 0.091 . YGL259W 51 DVSTVFK|RN 0.071 . YGL259W 52 VSTVFKR|NE 0.121 . YGL259W 70 IGVYVVK|ME 0.067 . YGL259W 102 ADIAYCK|SM 0.090 . YGL259W 126 ATFTGPR|ST 0.120 . YGL259W 154 ETHLLLR|IT 0.074 . YGL259W 157 LLLRITR|LS 0.181 . ____________________________^_________________

  • Fasta :-

    >YGL259W ATGCAATTGTTTTCCATCCTCTCTTTGTTGTCATCATTGATGTGTTCATTGACCGTTTTA GGGTCTTCCGCAAGTTCCTATGTTAAGTTTCCTGTTCAAAAGTTTGCTGATATTATAAAT ATAGGCACACAGGATGTTTCTACCGTCTTCAAAAGAAATGAGGTTCTTAACACCACAGTG ATAAATGGAATAGGAGTGTATGTTGTCAAGATGGAAATCGGAACGCCTCCACAAACGGTG TACCTACAGTTAGATACTGGCTCTTCAGATATGATTGTGAATAATGCTGACATTGCCTAT TGCAAATCGATGTCTGACGGATCTGACTACGCTTCAACTGATAATTACGAACTCACGGCA ACATTCACTGGGCCTCGTTCTACTACCACCTCACCAGAGCTTATAACACTGTCCGCTCTT ATAGGGGTAAATTCAATGCAAGAAACTCATCTACTTTTAAGAATAACGCGACTTTCTTCA ATGACATATACGTATTAG
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  • Fasta :-

    MQLFSILSLLSSLMCSLTVLGSSASSYVKFPVQKFADIINIGTQDVSTVFKRNEVLNTTV INGIGVYVVKMEIGTPPQTVYLQLDTGSSDMIVNNADIAYCKSMSDGSDYASTDNYELTA TFTGPRSTTTSPELITLSALIGVNSMQETHLLLRITRLSSMTYTY

  • title: inhibitor binding site
  • coordinates: D85,G87,S89,D97,I98,A99
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YGL259WT1210.6040.105YGL259WT1230.6000.072YGL259WT1190.5910.040YGL259WT1280.5400.331YGL259WT1360.5220.137YGL259WT1300.5130.102
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YGL259WT1210.6040.105YGL259WT1230.6000.072YGL259WT1190.5910.040YGL259WT1280.5400.331YGL259WT1360.5220.137YGL259WT1300.5130.102
IDSitePeptideScoreMethod
YGL259W131 SSTTTSPELI0.99unsp

YGL259W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India