YGR031W | Imo32p

_IDPredictionOTHERSPmTPCS_Position
YGR031WmTP0.4346550.0005150.564830CS pos: 38-39. LCA-FH. Pr: 0.1651
No Results

  • Fasta :-

    >YGR031W MMILGKAGILAQYGTIYVRQNTIRNNLSSCIFKQSLCAFHSLAKVLQQKQVPLDLSYDII KRDAVKTGDEGKPRPPIIILHGLFGNKLNNRSIGRNLNKKLGRDVYLLDLRNHGSSPHSS VHNYEVMSEDVKHFITKHELNTNGGPIIIGHSMGGKVAMMLVLKNPQLCSMLVCIENAPV SLRPNAEFVEYIKALMEIVNDKGKTIRTLKQADEHLAERIGGNELVRRFLLTALKKVKMD NSSSVSSYTFEERIPLATLKDAIVKGEIAAWPLDPARERWTRPALFIRATQSHYVVDEYL PIIGAFFPRFETRDIDAGHWVNAEKPGECAESIVDFVERHED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YGR031W.fa Sequence name : YGR031W Sequence length : 342 VALUES OF COMPUTED PARAMETERS Coef20 : 3.856 CoefTot : -1.204 ChDiff : 6 ZoneTo : 53 KR : 6 DE : 0 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.394 1.641 0.092 0.618 MesoH : -0.493 0.377 -0.407 0.233 MuHd_075 : 40.760 27.210 11.357 10.433 MuHd_095 : 29.850 21.570 9.371 7.300 MuHd_100 : 37.068 27.723 11.113 9.200 MuHd_105 : 34.712 26.635 9.936 8.719 Hmax_075 : 19.483 21.817 2.597 7.175 Hmax_095 : 12.425 13.800 2.107 4.891 Hmax_100 : 18.300 20.100 3.513 6.440 Hmax_105 : 20.300 21.933 3.488 7.373 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2133 0.7867 DFMC : 0.1474 0.8526 This protein is probably imported in mitochondria. f(Ser) = 0.0755 f(Arg) = 0.0377 CMi = 0.61444 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 342 YGR031W MMILGKAGILAQYGTIYVRQNTIRNNLSSCIFKQSLCAFHSLAKVLQQKQVPLDLSYDIIKRDAVKTGDEGKPRPPIIIL 80 HGLFGNKLNNRSIGRNLNKKLGRDVYLLDLRNHGSSPHSSVHNYEVMSEDVKHFITKHELNTNGGPIIIGHSMGGKVAMM 160 LVLKNPQLCSMLVCIENAPVSLRPNAEFVEYIKALMEIVNDKGKTIRTLKQADEHLAERIGGNELVRRFLLTALKKVKMD 240 NSSSVSSYTFEERIPLATLKDAIVKGEIAAWPLDPARERWTRPALFIRATQSHYVVDEYLPIIGAFFPRFETRDIDAGHW 320 VNAEKPGECAESIVDFVERHED 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YGR031W 6 -MMILGK|AG 0.061 . YGR031W 19 YGTIYVR|QN 0.071 . YGR031W 24 VRQNTIR|NN 0.088 . YGR031W 33 LSSCIFK|QS 0.080 . YGR031W 44 AFHSLAK|VL 0.064 . YGR031W 49 AKVLQQK|QV 0.069 . YGR031W 61 LSYDIIK|RD 0.059 . YGR031W 62 SYDIIKR|DA 0.242 . YGR031W 66 IKRDAVK|TG 0.067 . YGR031W 72 KTGDEGK|PR 0.062 . YGR031W 74 GDEGKPR|PP 0.123 . YGR031W 87 HGLFGNK|LN 0.057 . YGR031W 91 GNKLNNR|SI 0.180 . YGR031W 95 NNRSIGR|NL 0.101 . YGR031W 99 IGRNLNK|KL 0.071 . YGR031W 100 GRNLNKK|LG 0.100 . YGR031W 103 LNKKLGR|DV 0.125 . YGR031W 111 VYLLDLR|NH 0.073 . YGR031W 132 VMSEDVK|HF 0.065 . YGR031W 137 VKHFITK|HE 0.065 . YGR031W 156 GHSMGGK|VA 0.067 . YGR031W 164 AMMLVLK|NP 0.054 . YGR031W 183 NAPVSLR|PN 0.079 . YGR031W 193 EFVEYIK|AL 0.063 . YGR031W 202 MEIVNDK|GK 0.061 . YGR031W 204 IVNDKGK|TI 0.070 . YGR031W 207 DKGKTIR|TL 0.110 . YGR031W 210 KTIRTLK|QA 0.172 . YGR031W 219 DEHLAER|IG 0.084 . YGR031W 227 GGNELVR|RF 0.063 . YGR031W 228 GNELVRR|FL 0.201 . YGR031W 235 FLLTALK|KV 0.058 . YGR031W 236 LLTALKK|VK 0.079 . YGR031W 238 TALKKVK|MD 0.066 . YGR031W 253 SYTFEER|IP 0.076 . YGR031W 260 IPLATLK|DA 0.084 . YGR031W 265 LKDAIVK|GE 0.063 . YGR031W 277 WPLDPAR|ER 0.079 . YGR031W 279 LDPARER|WT 0.110 . YGR031W 282 ARERWTR|PA 0.323 . YGR031W 288 RPALFIR|AT 0.108 . YGR031W 309 IGAFFPR|FE 0.114 . YGR031W 313 FPRFETR|DI 0.236 . YGR031W 325 HWVNAEK|PG 0.071 . YGR031W 339 IVDFVER|HE 0.094 . ____________________________^_________________

  • Fasta :-

    >YGR031W ATGATGATACTGGGTAAAGCCGGGATCCTGGCACAGTATGGGACAATATATGTGAGACAA AATACCATTCGGAATAATTTAAGTTCCTGCATTTTTAAGCAGTCACTATGTGCCTTTCAT TCATTAGCAAAGGTGCTGCAACAAAAGCAAGTCCCACTGGACCTTTCATATGACATAATC AAGAGAGATGCAGTAAAAACTGGGGATGAAGGGAAGCCAAGACCACCTATTATCATACTT CACGGCTTATTCGGTAACAAGCTCAACAACCGAAGCATTGGCCGTAACCTTAACAAGAAA TTGGGAAGAGACGTGTATCTGCTGGACCTAAGAAATCATGGATCCTCACCACACAGTTCA GTCCATAACTACGAAGTCATGTCGGAAGACGTGAAACACTTTATCACAAAGCACGAATTA AACACCAATGGAGGCCCTATTATAATAGGACACTCAATGGGTGGTAAAGTTGCCATGATG CTGGTCCTGAAAAACCCGCAACTTTGTTCGATGTTAGTCTGTATAGAGAACGCTCCGGTG AGTTTGCGCCCTAACGCTGAGTTTGTCGAATACATCAAAGCGCTGATGGAAATCGTCAAC GACAAGGGCAAAACTATCCGCACGCTGAAACAGGCTGATGAACACCTTGCAGAGAGGATC GGCGGCAATGAGCTAGTAAGGCGGTTTCTCCTAACGGCGCTGAAAAAGGTCAAGATGGAC AATTCATCGTCTGTGTCGTCATATACATTCGAAGAACGAATTCCCCTCGCAACACTGAAA GATGCCATTGTCAAAGGTGAAATTGCCGCGTGGCCCCTAGATCCTGCTCGTGAACGATGG ACGCGGCCTGCGCTATTCATCAGGGCTACTCAATCGCATTATGTGGTAGACGAGTATCTT CCGATCATCGGCGCGTTCTTTCCACGCTTTGAAACACGTGACATCGATGCGGGTCACTGG GTAAATGCGGAGAAGCCTGGGGAATGTGCCGAAAGCATCGTCGATTTTGTGGAGCGGCAC GAGGATTAA
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  • Fasta :-

    MMILGKAGILAQYGTIYVRQNTIRNNLSSCIFKQSLCAFHSLAKVLQQKQVPLDLSYDII KRDAVKTGDEGKPRPPIIILHGLFGNKLNNRSIGRNLNKKLGRDVYLLDLRNHGSSPHSS VHNYEVMSEDVKHFITKHELNTNGGPIIIGHSMGGKVAMMLVLKNPQLCSMLVCIENAPV SLRPNAEFVEYIKALMEIVNDKGKTIRTLKQADEHLAERIGGNELVRRFLLTALKKVKMD NSSSVSSYTFEERIPLATLKDAIVKGEIAAWPLDPARERWTRPALFIRATQSHYVVDEYL PIIGAFFPRFETRDIDAGHWVNAEKPGECAESIVDFVERHED

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IDSitePeptideScoreMethod
YGR031W116 SNHGSSPHSS0.995unsp

YGR031W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India