YGR101W | rhomboid protease PCP1

_IDPredictionOTHERSPmTPCS_Position
YGR101WmTP0.0704840.0000870.929429CS pos: 39-40. RSQ-ST. Pr: 0.3568
No Results

  • Fasta :-

    >YGR101W MSGVSSVMLGLRPATRIFFRSNISVSPSRTFVSYIGRSQSTSILKNAPNLEDNVTNLQKI IPKRFFSQTSILKSRWKPIFNEETTNRYVRLNRFQQYQQQRSGGNPLGSMTILGLSLMAG IYFGSPYLFEHVPPFTYFKTHPKNLVYALLGINVAVFGLWQLPKCWRFLQKYMLLQKDYV TSKISIIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWY PKLARLAIVGPSLGASGALFGVLGCFSYLFPHAKILLFVFPVPGGAWVAFLASVAWNAAG CALRWGSFDYAAHLGGSMMGVLYGWYISKAVEKQRQRRLQAAGRWF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YGR101W.fa Sequence name : YGR101W Sequence length : 346 VALUES OF COMPUTED PARAMETERS Coef20 : 4.822 CoefTot : 0.341 ChDiff : 24 ZoneTo : 50 KR : 6 DE : 0 CleavSite : 39 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.182 2.094 0.378 0.874 MesoH : 1.245 1.253 0.093 0.566 MuHd_075 : 33.595 17.509 6.817 8.426 MuHd_095 : 40.065 23.439 9.025 9.466 MuHd_100 : 39.134 22.523 9.081 9.823 MuHd_105 : 34.067 24.584 7.781 9.240 Hmax_075 : 16.500 18.200 2.641 7.000 Hmax_095 : 18.375 12.337 2.855 5.924 Hmax_100 : 20.000 19.000 3.329 6.380 Hmax_105 : 15.750 23.200 2.029 7.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0057 0.9943 DFMC : 0.0075 0.9925 This protein is probably imported in chloroplast. f(Ser) = 0.2200 f(Arg) = 0.1000 CMi = 1.04762 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 346 YGR101W MSGVSSVMLGLRPATRIFFRSNISVSPSRTFVSYIGRSQSTSILKNAPNLEDNVTNLQKIIPKRFFSQTSILKSRWKPIF 80 NEETTNRYVRLNRFQQYQQQRSGGNPLGSMTILGLSLMAGIYFGSPYLFEHVPPFTYFKTHPKNLVYALLGINVAVFGLW 160 QLPKCWRFLQKYMLLQKDYVTSKISIIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWY 240 PKLARLAIVGPSLGASGALFGVLGCFSYLFPHAKILLFVFPVPGGAWVAFLASVAWNAAGCALRWGSFDYAAHLGGSMMG 320 VLYGWYISKAVEKQRQRRLQAAGRWF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................P........ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ YGR101W 12 SVMLGLR|PA 0.095 . YGR101W 16 GLRPATR|IF 0.095 . YGR101W 20 ATRIFFR|SN 0.146 . YGR101W 29 ISVSPSR|TF 0.077 . YGR101W 37 FVSYIGR|SQ 0.151 . YGR101W 45 QSTSILK|NA 0.062 . YGR101W 59 NVTNLQK|II 0.063 . YGR101W 63 LQKIIPK|RF 0.064 . YGR101W 64 QKIIPKR|FF 0.228 . YGR101W 73 SQTSILK|SR 0.065 . YGR101W 75 TSILKSR|WK 0.091 . YGR101W 77 ILKSRWK|PI 0.081 . YGR101W 87 NEETTNR|YV 0.127 . YGR101W 90 TTNRYVR|LN 0.291 . YGR101W 93 RYVRLNR|FQ 0.243 . YGR101W 101 QQYQQQR|SG 0.177 . YGR101W 139 PPFTYFK|TH 0.060 . YGR101W 143 YFKTHPK|NL 0.067 . YGR101W 164 GLWQLPK|CW 0.068 . YGR101W 167 QLPKCWR|FL 0.098 . YGR101W 171 CWRFLQK|YM 0.067 . YGR101W 177 KYMLLQK|DY 0.063 . YGR101W 183 KDYVTSK|IS 0.063 . YGR101W 242 FSLWYPK|LA 0.064 . YGR101W 245 WYPKLAR|LA 0.095 . YGR101W 274 YLFPHAK|IL 0.072 . YGR101W 304 AAGCALR|WG 0.082 . YGR101W 329 YGWYISK|AV 0.088 . YGR101W 333 ISKAVEK|QR 0.066 . YGR101W 335 KAVEKQR|QR 0.086 . YGR101W 337 VEKQRQR|RL 0.092 . YGR101W 338 EKQRQRR|LQ 0.508 *ProP* YGR101W 344 RLQAAGR|WF 0.098 . ____________________________^_________________

  • Fasta :-

    >YGR101W ATGTCAGGTGTAAGCTCTGTTATGCTCGGTCTTCGACCTGCTACAAGAATTTTTTTCCGC AGTAATATTTCGGTTTCACCTTCGAGGACTTTTGTATCATATATTGGAAGATCCCAGAGC ACGTCGATACTCAAAAATGCTCCCAACTTAGAGGACAATGTCACAAATCTTCAGAAAATT ATACCGAAACGGTTCTTTTCTCAAACATCAATTTTGAAATCAAGGTGGAAGCCTATATTC AATGAAGAAACTACTAATCGATACGTACGTTTGAACAGGTTTCAGCAGTACCAGCAGCAG AGAAGCGGCGGCAATCCTCTGGGCTCTATGACTATTTTGGGGCTCTCTTTAATGGCAGGA ATATATTTTGGCTCCCCTTATTTGTTCGAGCACGTTCCACCCTTTACGTATTTTAAGACG CATCCAAAGAATCTGGTATACGCGTTATTAGGCATCAATGTTGCCGTATTTGGACTATGG CAGCTACCCAAATGCTGGAGGTTTCTACAGAAGTACATGTTGCTGCAAAAGGATTACGTA ACTAGCAAAATTTCGATAATCGGAAGTGCGTTTTCACATCAAGAATTCTGGCACTTAGGT ATGAACATGCTAGCGTTGTGGTCCTTTGGTACTTCACTCGCAACAATGTTGGGAGCATCC AATTTTTTCTCCTTATATATGAATAGTGCCATTGCAGGTTCTTTGTTTTCGTTATGGTAT CCAAAACTGGCACGCCTAGCCATTGTCGGACCTAGCTTGGGTGCCAGTGGAGCGCTATTT GGGGTTTTAGGATGTTTTTCATATCTATTCCCACACGCTAAAATTTTGCTGTTTGTTTTC CCAGTCCCAGGTGGGGCTTGGGTAGCATTCTTGGCTTCAGTGGCATGGAATGCAGCTGGT TGTGCTTTAAGATGGGGGTCATTTGATTACGCTGCGCATTTAGGTGGCTCTATGATGGGG GTCTTGTACGGATGGTATATAAGTAAAGCTGTAGAGAAACAAAGGCAGCGTCGCCTTCAG GCTGCTGGTAGGTGGTTTTAA
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  • Fasta :-

    MSGVSSVMLGLRPATRIFFRSNISVSPSRTFVSYIGRSQSTSILKNAPNLEDNVTNLQKI IPKRFFSQTSILKSRWKPIFNEETTNRYVRLNRFQQYQQQRSGGNPLGSMTILGLSLMAG IYFGSPYLFEHVPPFTYFKTHPKNLVYALLGINVAVFGLWQLPKCWRFLQKYMLLQKDYV TSKISIIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWY PKLARLAIVGPSLGASGALFGVLGCFSYLFPHAKILLFVFPVPGGAWVAFLASVAWNAAG CALRWGSFDYAAHLGGSMMGVLYGWYISKAVEKQRQRRLQAAGRWF

    No Results
No Results
No Results
IDSitePeptideScoreMethod
YGR101W26 SNISVSPSRT0.997unsp

YGR101W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India