YGR135W | proteasome core particle subunit alpha 3

_IDPredictionOTHERSPmTPCS_Position
YGR135WOTHER0.9997950.0001620.000043
No Results

  • Fasta :-

    >YGR135W MGSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQD TSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQ GYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDY KDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILV KTGITKKDEDEEADEDMK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YGR135W.fa Sequence name : YGR135W Sequence length : 258 VALUES OF COMPUTED PARAMETERS Coef20 : 4.153 CoefTot : -0.025 ChDiff : -8 ZoneTo : 6 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.276 1.582 0.218 0.615 MesoH : -0.802 0.347 -0.417 0.196 MuHd_075 : 26.148 10.603 5.061 8.283 MuHd_095 : 9.993 5.721 2.184 1.806 MuHd_100 : 14.535 6.396 3.255 3.903 MuHd_105 : 15.118 5.629 3.176 4.449 Hmax_075 : 0.800 1.400 -0.823 2.300 Hmax_095 : -4.288 -3.587 -2.370 -0.429 Hmax_100 : 7.400 -1.600 0.040 2.010 Hmax_105 : -2.450 -2.800 -2.377 1.132 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8613 0.1387 DFMC : 0.8080 0.1920
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 258 YGR135W MGSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGL 80 TADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGW 160 KAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILV 240 KTGITKKDEDEEADEDMK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YGR135W 4 ---MGSR|RY 0.071 . YGR135W 5 --MGSRR|YD 0.160 . YGR135W 9 SRRYDSR|TT 0.114 . YGR135W 18 IFSPEGR|LY 0.089 . YGR135W 50 IVLAAER|KV 0.081 . YGR135W 51 VLAAERK|VT 0.092 . YGR135W 65 QDTSTEK|LY 0.052 . YGR135W 68 STEKLYK|LN 0.068 . YGR135W 72 LYKLNDK|IA 0.065 . YGR135W 92 ILINTAR|IH 0.083 . YGR135W 100 HAQNYLK|TY 0.063 . YGR135W 113 PVEILVR|RL 0.087 . YGR135W 114 VEILVRR|LS 0.143 . YGR135W 119 RRLSDIK|QG 0.063 . YGR135W 129 TQHGGLR|PF 0.109 . YGR135W 143 YAGYDDR|YG 0.081 . YGR135W 161 GNYTGWK|AI 0.094 . YGR135W 181 LLQMDYK|DD 0.082 . YGR135W 185 DYKDDMK|VD 0.062 . YGR135W 195 AIELALK|TL 0.062 . YGR135W 199 ALKTLSK|TT 0.064 . YGR135W 210 SALTYDR|LE 0.071 . YGR135W 217 LEFATIR|KG 0.070 . YGR135W 218 EFATIRK|GA 0.128 . YGR135W 228 DGEVYQK|IF 0.062 . YGR135W 231 VYQKIFK|PQ 0.060 . YGR135W 236 FKPQEIK|DI 0.068 . YGR135W 241 IKDILVK|TG 0.058 . YGR135W 246 VKTGITK|KD 0.070 . YGR135W 247 KTGITKK|DE 0.118 . YGR135W 258 EADEDMK|-- 0.059 . ____________________________^_________________

  • Fasta :-

    >YGR135W ATGGGTTCCAGAAGATACGATTCCAGGACAACAATTTTCTCCCCTGAGGGACGTCTATAT CAGGTTGAATACGCGCTAGAATCCATTTCACATGCAGGTACCGCAATTGGGATTATGGCA TCTGATGGGATTGTTCTTGCAGCAGAACGCAAAGTCACAAGTACTTTACTAGAACAAGAC ACCTCTACCGAAAAACTTTATAAGTTAAACGATAAAATTGCGGTTGCCGTTGCTGGACTG ACTGCAGATGCAGAAATTCTAATAAATACGGCTAGAATTCACGCTCAAAATTACCTTAAA ACCTATAATGAAGATATACCAGTAGAAATTTTGGTGAGAAGGCTAAGTGATATAAAACAA GGTTACACGCAACATGGTGGTTTAAGACCATTTGGTGTGTCCTTTATCTACGCCGGTTAT GACGATAGATACGGTTACCAATTGTATACATCTAATCCATCGGGAAACTATACAGGGTGG AAGGCTATTAGTGTTGGCGCTAACACATCAGCAGCACAAACCCTACTTCAAATGGACTAC AAGGATGATATGAAAGTCGATGATGCCATTGAACTGGCTTTAAAAACGTTATCCAAAACT ACCGACAGTAGCGCGCTGACTTATGACAGGTTGGAATTTGCTACTATCAGAAAGGGTGCT AATGACGGAGAAGTGTATCAGAAGATTTTCAAGCCTCAAGAGATAAAGGATATATTGGTA AAGACTGGTATTACCAAGAAGGATGAAGACGAAGAAGCTGATGAAGATATGAAATAA
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  • Fasta :-

    MGSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQD TSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQ GYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDY KDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILV KTGITKKDEDEEADEDMK

  • title: active site
  • coordinates: G33,E49,K51,K65,A167
No Results
No Results
IDSitePeptideScoreMethod
YGR135W116 SVRRLSDIKQ0.994unsp

YGR135W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India