YHR024C | mitochondrial-processing protease subunit alpha

_IDPredictionOTHERSPmTPCS_Position
YHR024CmTP0.1724310.0008200.826749CS pos: 10-11. RLY-SN. Pr: 0.2111
No Results

  • Fasta :-

    >YHR024C MLRNGVQRLYSNIARTDNFKLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGC THILDRLAFKSTEHVEGRAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSE TVRFPKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIP SISKYYLLDYRNKFYTPENTVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGG ESCIPPAPVFGNLPELFHIQIGFEGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYS RLYTHVLNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDL RLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDI SRVAEMIFTGNVNNAGNGKGRATVVMQGDRGSFGDVENVLKAYGLGNSSSSKNDSPKKKG WF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YHR024C.fa Sequence name : YHR024C Sequence length : 482 VALUES OF COMPUTED PARAMETERS Coef20 : 4.260 CoefTot : -0.712 ChDiff : -7 ZoneTo : 46 KR : 5 DE : 1 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.376 1.176 0.158 0.546 MesoH : 0.172 0.304 -0.184 0.338 MuHd_075 : 32.546 15.407 8.404 5.845 MuHd_095 : 37.377 28.074 10.179 10.954 MuHd_100 : 34.135 26.937 10.181 9.523 MuHd_105 : 29.837 24.822 8.693 7.869 Hmax_075 : -1.283 12.400 -1.528 3.240 Hmax_095 : 6.737 11.900 0.742 4.532 Hmax_100 : 9.500 11.700 1.027 4.350 Hmax_105 : -0.500 9.800 -0.280 2.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2243 0.7757 DFMC : 0.1759 0.8241 This protein is probably imported in mitochondria. f(Ser) = 0.1087 f(Arg) = 0.0652 CMi = 0.67385 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 482 YHR024C MLRNGVQRLYSNIARTDNFKLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRAM 80 AETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHT 160 AAYSGETLGSPLICPRELIPSISKYYLLDYRNKFYTPENTVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGG 240 ESCIPPAPVFGNLPELFHIQIGFEGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCVAFN 320 HSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHG 400 RKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNGKGRATVVMQGDRGSFGDVENVLKAYGLGNSSSSKNDSPKKKG 480 WF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YHR024C 3 ----MLR|NG 0.072 . YHR024C 8 LRNGVQR|LY 0.143 . YHR024C 15 LYSNIAR|TD 0.101 . YHR024C 20 ARTDNFK|LS 0.062 . YHR024C 29 SLANGLK|VA 0.067 . YHR024C 51 YIDAGSR|FE 0.082 . YHR024C 55 GSRFEGR|NL 0.117 . YHR024C 58 FEGRNLK|GC 0.149 . YHR024C 66 CTHILDR|LA 0.109 . YHR024C 70 LDRLAFK|ST 0.123 . YHR024C 78 TEHVEGR|AM 0.111 . YHR024C 97 YQCTSSR|EN 0.083 . YHR024C 113 FNQDVGK|ML 0.069 . YHR024C 123 LMSETVR|FP 0.100 . YHR024C 126 ETVRFPK|IT 0.193 . YHR024C 136 QELQEQK|LS 0.057 . YHR024C 149 IDEVWMK|PE 0.056 . YHR024C 176 SPLICPR|EL 0.097 . YHR024C 184 LIPSISK|YY 0.053 . YHR024C 191 YYLLDYR|NK 0.065 . YHR024C 193 LLDYRNK|FY 0.070 . YHR024C 211 VGVPHEK|AL 0.071 . YHR024C 218 ALELTEK|YL 0.095 . YHR024C 232 THPPITK|KV 0.082 . YHR024C 233 HPPITKK|VA 0.110 . YHR024C 296 SAGGPGK|GM 0.073 . YHR024C 301 GKGMYSR|LY 0.121 . YHR024C 358 YNTFANK|DL 0.070 . YHR024C 361 FANKDLR|LT 0.104 . YHR024C 369 TEDEVSR|AK 0.092 . YHR024C 371 DEVSRAK|NQ 0.054 . YHR024C 375 RAKNQLK|SS 0.072 . YHR024C 385 LMNLESK|LV 0.075 . YHR024C 394 ELEDMGR|QV 0.095 . YHR024C 401 QVLMHGR|KI 0.093 . YHR024C 402 VLMHGRK|IP 0.070 . YHR024C 411 VNEMISK|IE 0.062 . YHR024C 416 SKIEDLK|PD 0.065 . YHR024C 422 KPDDISR|VA 0.114 . YHR024C 439 NNAGNGK|GR 0.072 . YHR024C 441 AGNGKGR|AT 0.121 . YHR024C 450 VVMQGDR|GS 0.078 . YHR024C 461 DVENVLK|AY 0.067 . YHR024C 472 GNSSSSK|ND 0.081 . YHR024C 477 SKNDSPK|KK 0.090 . YHR024C 478 KNDSPKK|KG 0.083 . YHR024C 479 NDSPKKK|GW 0.210 . ____________________________^_________________

  • Fasta :-

    >YHR024C ATGCTAAGGAACGGCGTTCAGAGGTTGTACTCTAACATCGCTAGAACCGATAATTTTAAG CTTTCGTCACTAGCGAATGGACTGAAAGTGGCGACATCAAATACTCCTGGACACTTTAGT GCCTTAGGCCTATACATCGACGCAGGATCACGGTTTGAAGGTAGGAATTTGAAGGGTTGT ACACATATCTTGGATAGACTAGCATTCAAATCAACCGAACACGTCGAGGGCCGAGCAATG GCAGAGACGTTGGAGTTACTGGGTGGGAATTACCAGTGTACCTCGTCTAGAGAAAATTTG ATGTATCAGGCTTCTGTGTTCAACCAGGATGTGGGTAAAATGCTTCAATTAATGTCAGAA ACTGTGAGGTTCCCTAAGATTACTGAGCAAGAACTGCAAGAACAGAAGCTGTCGGCAGAG TATGAAATCGATGAAGTTTGGATGAAGCCAGAATTGGTATTACCTGAGCTGTTGCACACA GCAGCATACTCCGGAGAAACTTTGGGGTCCCCTTTAATCTGCCCTAGAGAGCTCATTCCT TCTATTTCTAAATACTACTTATTGGACTACAGAAATAAATTCTACACCCCAGAAAATACT GTTGCGGCATTTGTTGGTGTTCCTCACGAAAAGGCATTAGAGCTTACAGAAAAGTATCTC GGTGACTGGCAATCTACACACCCTCCGATCACCAAAAAAGTTGCCCAATATACGGGCGGG GAAAGTTGTATTCCACCAGCACCAGTGTTTGGGAATTTACCAGAATTATTCCACATCCAG ATCGGATTTGAAGGTCTCCCTATAGATCATCCAGACATTTATGCTTTAGCAACATTACAA ACTTTACTTGGAGGTGGTGGTTCTTTCAGTGCTGGTGGGCCAGGAAAGGGGATGTATTCT CGTTTGTATACCCACGTTTTGAACCAGTATTACTTTGTTGAAAATTGTGTTGCGTTCAAC CATTCTTATTCGGATTCTGGTATTTTCGGTATTTCATTATCTTGTATACCGCAGGCAGCT CCTCAAGCGGTTGAGGTAATTGCACAGCAAATGTATAATACATTTGCTAATAAGGATTTG AGGTTAACTGAAGACGAAGTCTCCAGGGCCAAGAATCAGTTGAAGTCTTCACTACTAATG AACCTAGAGTCTAAACTGGTAGAATTGGAAGATATGGGCAGACAAGTTCTCATGCATGGT CGCAAAATCCCAGTCAACGAAATGATAAGTAAGATCGAAGATTTGAAGCCAGATGATATC TCACGTGTTGCCGAAATGATATTTACGGGAAATGTAAATAATGCTGGCAATGGTAAGGGT AGAGCTACTGTTGTAATGCAAGGAGACAGAGGATCCTTTGGAGATGTGGAAAATGTACTG AAGGCATATGGATTGGGTAACAGCTCCTCCTCCAAAAACGATAGTCCCAAGAAGAAGGGT TGGTTTTGA
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  • Fasta :-

    MLRNGVQRLYSNIARTDNFKLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGC THILDRLAFKSTEHVEGRAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSE TVRFPKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIP SISKYYLLDYRNKFYTPENTVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGG ESCIPPAPVFGNLPELFHIQIGFEGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYS RLYTHVLNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDL RLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDI SRVAEMIFTGNVNNAGNGKGRATVVMQGDRGSFGDVENVLKAYGLGNSSSSKNDSPKKKG WF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YHR024C471 SNSSSSKNDS0.997unspYHR024C475 SSKNDSPKKK0.997unsp

YHR024C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India